prot_E_fasciculatus_S2_contig7656.15824.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7656.15824.1
Unique Nameprot_E_fasciculatus_S2_contig7656.15824.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length137
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7656.15824.1 vs. uniprot
Match: D7FLK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK8_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 2.770e-17
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 0 
Query:    4 SVIIRPLFVLEDVVLYVFVVVRSFFVWSFSGAYSVAMNVHGLSNLPRPLSSSPRIAAGSSSSPPSPASLARAAP-------RAPGNRNAWSTLVRIVEGIIAICVCVFVLDG 108
            +++ R LF LED+VLY+ V VRS+ VW  S  Y  AMNV GLS++ R +SSSPRIAAG  ++PPSPA L+ +AP       R   +R+AWST   IVEG++   VC + + G
Sbjct:   27 TIMSRSLFSLEDIVLYIVVAVRSYVVWILSSTYYRAMNVPGLSDVLRQVSSSPRIAAGPPAAPPSPAELSPSAPPRSSCNHRVSESRSAWSTRGCIVEGVLFTVVCGYWMRG 138
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7656.15824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLK8_ECTSI2.770e-1749.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 108..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..107
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 115..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7656contigE_fasciculatus_S2_contig7656:2153..2771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7656.15824.1mRNA_E_fasciculatus_S2_contig7656.15824.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7656 2153..4771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7656.15824.1 ID=prot_E_fasciculatus_S2_contig7656.15824.1|Name=mRNA_E_fasciculatus_S2_contig7656.15824.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=137bp
GATSVIIRPLFVLEDVVLYVFVVVRSFFVWSFSGAYSVAMNVHGLSNLPR
PLSSSPRIAAGSSSSPPSPASLARAAPRAPGNRNAWSTLVRIVEGIIAIC
VCVFVLDGSGVNINIPSSLATTLLGFTLSLFLCFSL*
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