prot_E_fasciculatus_S2_contig7619.15785.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7619.15785.1
Unique Nameprot_E_fasciculatus_S2_contig7619.15785.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length509
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7619.15785.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 700 bits (1807), Expect = 5.820e-243
Identity = 415/533 (77.86%), Postives = 437/533 (81.99%), Query Frame = 0 
Query:   16 MCSVFFEVVEPLDHATFLSVCDEVLRDSLLLLAPFGLPRHLREALGSENEFIRLYGPRFRFILEAVSDATYKERGVTESQVAVTLHKLTEEEENPEAMAYLARMADSLREIYSPPRVLELPARAPTSTADLAAIGSSLVGAGAVYTPGPQQVGRRGGXXXXXRGAPLCDGTPPQPSHPGHAG------CGRGENSVAD-------------------------DAEEPDHDKARRDRVASCLSALRRSREGLEVFSDGLEQAHIQALTEAFASRYRLAGSASPGGGDSAGSSS--SQDLSSPRSDVAALDEFAAVPFLDHELFMLVRAIEKERLGEEDGAGKEEEPXXXXXXXXXXXXXXXXX-------DGETRLCERPAACLEYLLTSQAVRVRADESMERGLEKKAAASLEEANGLMEAFLKEGHRLPRPSRHVWAASLRAGLAKCEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAG 508
            MCSVFFEVVEPLDHATFLSVCDEVLRDSLL+LAPFGLPRHLREALGSE EFIRLYGPRFRFILEAVSD TYKERGVTESQVAVTLHKLTEEE+NPEAMAYLARM DSLREIYSP R+LELP RAPTSTADLA IGSSL+GAGAVYTPGPQQ GRRGG      GAPLCDGTP QPS  GHAG       G G++S A                          D  E DHDK +R+RVASCLSALR  RE LEVFSD LEQAHIQALTEAFA RY  +G+A PG  DSAG     SQ+L S RSDVAALDEFAAVPFLDHELFMLVRAIE+ERLGEE GAGKE+  XXXXXXXXXXXX            DG+T LCERPAACLE+LLTSQAVRVRADESMERGL+K+AAASL+EAN LMEAFL+EG RLPRPSRH+  A LRAGLAKCEMRGGDLEAA+AHAEAALAEHPACG+AFLIRGQCRRELGDN GAL DLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCR RAG
Sbjct:    1 MCSVFFEVVEPLDHATFLSVCDEVLRDSLLVLAPFGLPRHLREALGSEKEFIRLYGPRFRFILEAVSDVTYKERGVTESQVAVTLHKLTEEEQNPEAMAYLARMGDSLREIYSPARILELPTRAPTSTADLATIGSSLLGAGAVYTPGPQQAGRRGGRGG---GAPLCDGTPRQPSRAGHAGRCSSSPAGDGDSSCAGENNKCSTAGRAEGGXXXXXXXDSRADKGETDHDKVQRERVASCLSALRGCREELEVFSDELEQAHIQALTEAFAGRY--SGAAPPG--DSAGXXXXXSQELKSRRSDVAALDEFAAVPFLDHELFMLVRAIEEERLGEEKGAGKEKXXXXXXXXXXXXXXGACSESPTAADGDGDTSLCERPAACLEFLLTSQAVRVRADESMERGLDKEAAASLKEANILMEAFLEEGQRLPRPSRHL--AELRAGLAKCEMRGGDLEAAIAHAEAALAEHPACGEAFLIRGQCRRELGDNGGALRDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRARAG 524
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BLAST of mRNA_E_fasciculatus_S2_contig7619.15785.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.650e-25
Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 0 
Query:   20 FFEVVEPLDHATFLSVCDEVLRDSLLLLAPFGLPRHLREALGSENEFIRLYGPRFRFILEAVSDATYKERGVTESQVAVTLHKLTEEEENPEAMAYLARMADSLREIYSPPRVLELPARAPTST-ADLAA 148
            FF+VV PLD +TFLS   EVL  SL+L AP GLP  L+    SE  F+  YGPRFR ILEAVS+A Y+ RG++ES+++VT+HKL  EE + +A+A +  + ++L+  Y  P VLELP  AP S  AD AA
Sbjct:   39 FFQVVAPLDLSTFLSATREVLETSLMLFAPLGLPPLLKRICPSEAGFLETYGPRFRAILEAVSEAVYEARGISESEMSVTIHKLVTEERDAQAVAAMRDLGEALKFAYDAPDVLELPCIAPVSALADFAA 168
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7619.15785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI5.820e-24377.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV6_9STRA2.650e-2552.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 360..491
e-value: 5.4E-9
score: 37.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 366..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7619contigE_fasciculatus_S2_contig7619:151..2989 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7619.15785.1mRNA_E_fasciculatus_S2_contig7619.15785.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7619 151..2989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7619.15785.1 ID=prot_E_fasciculatus_S2_contig7619.15785.1|Name=mRNA_E_fasciculatus_S2_contig7619.15785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=509bp
AAAAACVSQLLIVGEMCSVFFEVVEPLDHATFLSVCDEVLRDSLLLLAPF
GLPRHLREALGSENEFIRLYGPRFRFILEAVSDATYKERGVTESQVAVTL
HKLTEEEENPEAMAYLARMADSLREIYSPPRVLELPARAPTSTADLAAIG
SSLVGAGAVYTPGPQQVGRRGGGGGGGRGAPLCDGTPPQPSHPGHAGCGR
GENSVADDAEEPDHDKARRDRVASCLSALRRSREGLEVFSDGLEQAHIQA
LTEAFASRYRLAGSASPGGGDSAGSSSSQDLSSPRSDVAALDEFAAVPFL
DHELFMLVRAIEKERLGEEDGAGKEEEPASGRGSSSSSAAPAADDDGETR
LCERPAACLEYLLTSQAVRVRADESMERGLEKKAAASLEEANGLMEAFLK
EGHRLPRPSRHVWAASLRAGLAKCEMRGGDLEAAVAHAEAALAEHPACGD
AFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSR
ESCRERAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf