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Homology
BLAST of mRNA_E_fasciculatus_S2_contig7619.15785.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI) HSP 1 Score: 700 bits (1807), Expect = 5.820e-243 Identity = 415/533 (77.86%), Postives = 437/533 (81.99%), Query Frame = 1
Query: 46 MCSVFFEVVEPLDHATFLSVCDEVLRDSLLLLAPFGLPRHLREALGSENEFIRLYGPRFRFILEAVSDATYKERGVTESQVAVTLHKLTEEEENPEAMAYLARMADSLREIYSPPRVLELPARAPTSTADLAAIGSSLVGAGAVYTPGPQQVGRRGGXXXXXRGAPLCDGTPPQPSHPGHAG------CGRGENSVAD-------------------------DAEEPDHDKARRDRVASCLSALRRSREGLEVFSDGLEQAHIQALTEAFASRYRLAGSASPGGGDSAGSSS--SQDLSSPRSDVAALDEFAAVPFLDHELFMLVRAIEKERLGEEDGAGKEEEPXXXXXXXXXXXXXXXXX-------DGETRLCERPAACLEYLLTSQAVRVRADESMERGLEKKAAASLEEANGLMEAFLKEGHRLPRPSRHVWAASLRAGLAKCEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAG 1524
MCSVFFEVVEPLDHATFLSVCDEVLRDSLL+LAPFGLPRHLREALGSE EFIRLYGPRFRFILEAVSD TYKERGVTESQVAVTLHKLTEEE+NPEAMAYLARM DSLREIYSP R+LELP RAPTSTADLA IGSSL+GAGAVYTPGPQQ GRRGG GAPLCDGTP QPS GHAG G G++S A D E DHDK +R+RVASCLSALR RE LEVFSD LEQAHIQALTEAFA RY +G+A PG DSAG SQ+L S RSDVAALDEFAAVPFLDHELFMLVRAIE+ERLGEE GAGKE+ XXXXXXXXXXXX DG+T LCERPAACLE+LLTSQAVRVRADESMERGL+K+AAASL+EAN LMEAFL+EG RLPRPSRH+ A LRAGLAKCEMRGGDLEAA+AHAEAALAEHPACG+AFLIRGQCRRELGDN GAL DLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCR RAG
Sbjct: 1 MCSVFFEVVEPLDHATFLSVCDEVLRDSLLVLAPFGLPRHLREALGSEKEFIRLYGPRFRFILEAVSDVTYKERGVTESQVAVTLHKLTEEEQNPEAMAYLARMGDSLREIYSPARILELPTRAPTSTADLATIGSSLLGAGAVYTPGPQQAGRRGGRGG---GAPLCDGTPRQPSRAGHAGRCSSSPAGDGDSSCAGENNKCSTAGRAEGGXXXXXXXDSRADKGETDHDKVQRERVASCLSALRGCREELEVFSDELEQAHIQALTEAFAGRY--SGAAPPG--DSAGXXXXXSQELKSRRSDVAALDEFAAVPFLDHELFMLVRAIEEERLGEEKGAGKEKXXXXXXXXXXXXXXGACSESPTAADGDGDTSLCERPAACLEFLLTSQAVRVRADESMERGLDKEAAASLKEANILMEAFLEEGQRLPRPSRHL--AELRAGLAKCEMRGGDLEAAIAHAEAALAEHPACGEAFLIRGQCRRELGDNGGALRDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRARAG 524
BLAST of mRNA_E_fasciculatus_S2_contig7619.15785.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.650e-25 Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 1
Query: 58 FFEVVEPLDHATFLSVCDEVLRDSLLLLAPFGLPRHLREALGSENEFIRLYGPRFRFILEAVSDATYKERGVTESQVAVTLHKLTEEEENPEAMAYLARMADSLREIYSPPRVLELPARAPTST-ADLAA 444
FF+VV PLD +TFLS EVL SL+L AP GLP L+ SE F+ YGPRFR ILEAVS+A Y+ RG++ES+++VT+HKL EE + +A+A + + ++L+ Y P VLELP AP S AD AA
Sbjct: 39 FFQVVAPLDLSTFLSATREVLETSLMLFAPLGLPPLLKRICPSEAGFLETYGPRFRAILEAVSEAVYEARGISESEMSVTIHKLVTEERDAQAVAAMRDLGEALKFAYDAPDVLELPCIAPVSALADFAA 168
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 0 |
| Seed ortholog score | 707.6 |
| Seed ortholog evalue | 4.2e-201 |
| Seed eggNOG ortholog | 2880.D8LRZ0 |
| Preferred name | TOMM70A |
| Model size | 1527 |
| KEGG ko | ko:K00738,ko:K17768 |
| KEGG TC | 3.A.8.1 |
| KEGG Reaction | R05987 |
| KEGG Pathway | ko00510,ko00513,ko01100,map00510,map00513,map01100 |
| KEGG Module | M00075 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001101,GO:0001558,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005742,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010611,GO:0010614,GO:0010721,GO:0014070,GO:0014741,GO:0014743,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016202,GO:0017038,GO:0019867,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030308,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040008,GO:0042221,GO:0042277,GO:0042493,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043502,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045595,GO:0045596,GO:0045843,GO:0045926,GO:0046620,GO:0046621,GO:0046907,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048634,GO:0048635,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051128,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051241,GO:0051641,GO:0051649,GO:0055021,GO:0055022,GO:0055024,GO:0055026,GO:0055085,GO:0060284,GO:0060420,GO:0061024,GO:0061050,GO:0061052,GO:0061117,GO:0065002,GO:0065007,GO:0070201,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0090087,GO:0090150,GO:0090151,GO:0090257,GO:0097066,GO:0097068,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:1901698,GO:1901700,GO:1901861,GO:1901862,GO:1904386,GO:1904589,GO:1904591,GO:1904680,GO:1904951,GO:1905207,GO:1905208,GO:1990542,GO:2000026,GO:2000725,GO:2000726 |
| Exons | 5 |
| EggNOG free text desc. | protein transmembrane transport |
| EggNOG OGs | KOG0547@1,KOG0547@2759 |
| Ec32 ortholog description | Mitochondrial import receptor, Tom70 homolog |
| Ec32 ortholog | Ec-08_001370.1 |
| EC | 2.4.1.145 |
| Cds size | 1527 |
| COG Functional cat. | S |
| CAZy | GT54 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01003,ko02000,ko03029 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842424.0216737-CDS-E_fasciculatus_S2_contig7619:150..429 | 1696842424.0216737-CDS-E_fasciculatus_S2_contig7619:150..429 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7619 151..429 - |
| 1696842424.0413992-CDS-E_fasciculatus_S2_contig7619:848..1349 | 1696842424.0413992-CDS-E_fasciculatus_S2_contig7619:848..1349 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7619 849..1349 - |
| 1696842424.0579588-CDS-E_fasciculatus_S2_contig7619:1622..2064 | 1696842424.0579588-CDS-E_fasciculatus_S2_contig7619:1622..2064 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7619 1623..2064 - |
| 1696842424.0668442-CDS-E_fasciculatus_S2_contig7619:2354..2498 | 1696842424.0668442-CDS-E_fasciculatus_S2_contig7619:2354..2498 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7619 2355..2498 - |
| 1696842424.0757983-CDS-E_fasciculatus_S2_contig7619:2828..2989 | 1696842424.0757983-CDS-E_fasciculatus_S2_contig7619:2828..2989 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7619 2829..2989 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7619.15785.1 >prot_E_fasciculatus_S2_contig7619.15785.1 ID=prot_E_fasciculatus_S2_contig7619.15785.1|Name=mRNA_E_fasciculatus_S2_contig7619.15785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=509bp
AAAAACVSQLLIVGEMCSVFFEVVEPLDHATFLSVCDEVLRDSLLLLAPF GLPRHLREALGSENEFIRLYGPRFRFILEAVSDATYKERGVTESQVAVTL HKLTEEEENPEAMAYLARMADSLREIYSPPRVLELPARAPTSTADLAAIG SSLVGAGAVYTPGPQQVGRRGGGGGGGRGAPLCDGTPPQPSHPGHAGCGR GENSVADDAEEPDHDKARRDRVASCLSALRRSREGLEVFSDGLEQAHIQA LTEAFASRYRLAGSASPGGGDSAGSSSSQDLSSPRSDVAALDEFAAVPFL DHELFMLVRAIEKERLGEEDGAGKEEEPASGRGSSSSSAAPAADDDGETR LCERPAACLEYLLTSQAVRVRADESMERGLEKKAAASLEEANGLMEAFLK EGHRLPRPSRHVWAASLRAGLAKCEMRGGDLEAAVAHAEAALAEHPACGD AFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSR ESCRERAG* back to topmRNA from alignment at E_fasciculatus_S2_contig7619:151..2989- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7619.15785.1 ID=mRNA_E_fasciculatus_S2_contig7619.15785.1|Name=mRNA_E_fasciculatus_S2_contig7619.15785.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2839bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7619:151..2989- (Ectocarpus fasciculatus EfasUO2) GCAGCAGCTGCCGCCTGTGTTAGTCAGCTGCTGATCGTGGGCGAGATGTG
CAGCGTGTTCTTCGAAGTTGTAGAGCCTCTGGACCATGCCACGTTCCTGA
GCGTGTGCGACGAAGTGCTTCGAGACAGCCTCCTCCTGCTGGCTCCCTTT
GGACTTCCCAGGTCTGTGAGATCGATCGATCGCCTCGGAGACAGGGCTGG
GCCGGAGTCTCTTCGTCCTGAACTGCTTGTTCTGCGACCCTCGCTGTTGT
GTCTGGCGGAAGCCCCCGTTGCCCCCCTCTGTCTAGCTGTGCTTGCTGCC
ACTACACTGCTGTAATTTCCGTGTCTCGCCGGCGCCGGCACCCCACACGG
CTGGGCGCTCTCGTGCCCATGCTGGACCGTTGCCTGAGGCTTGCACACAC
GCCCCGCATAAAGCCAGATCCGCAGTCGTTGTTGTCCAGTTCAATCCCCC
CCTCCCGCCCGCGCGCGCGCCTCCCTTCCTTGCAACCACAGACACCTGCG
CGAGGCCCTCGGTAGCGAGAACGAGTTCATCCGACTGTACGGCCCGAGGT
TCAGGTTTATATTGGAAGCCGTGTCAGATGCCACGTACAAGGAGCGGGGT
GTTACGGAGAGCCAGGTTGCGGTCACCCTGCACAAGTGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGCCAGTTCCTGTGTGTGTGGTATGCTT
GACGGGGCAGTGCTGTGAGGGCTGAGCTTGGCGGTGGCAAGAGCTGCATC
GCGTGGGATTCCGATGAGAAGCCCTTTATTTTTTACATATTCAAAAATGC
GTGTTTGTTCTTCTGTAAGCATCGCACCGAGTGTTGGACCGGAGGGCGTG
TGGGGGCGAGTTGGACCCGTATCAAAGTCCGTCCTTGTGCTTGCTGTGCT
GCTGCTGCGGCGGCGGCGGCCTCAGGCTTACGGAAGAAGAGGAGAACCCG
GAAGCGATGGCCTACCTGGCCAGGATGGCCGACTCCCTCCGGGAAATCTA
CTCGCCCCCCCGCGTCCTCGAGCTCCCGGCGCGAGCACCCACCTCGACGG
CCGACTTGGCCGCCATCGGTTCTAGCCTTGTAGGGGCGGGCGCCGTCTAC
ACGCCGGGGCCGCAGCAAGTGGGTCGTCGCGGGGGGGGAGGAGGAGGAGG
AAGAGGGGCACCTCTTTGCGACGGCACGCCGCCGCAGCCAAGCCACCCGG
GGCACGCAGGGTGCGGTCGGGGGGAGAACAGCGTCGCTGACGATGCGGAG
GAGCCAGACCACGACAAGGCGAGGCGCGACAGGGTGGCGTCATGCTTGTC
GGCCTTGCGTCGCTCTCGGGAGGGGCTTGAGGTGTTCTCCGATGGGCTCG
AACAGGCGCACATTCAGGTGCGTAGAGCGGGCGGGTTCTTGCTGCGATTC
GTTTTAGGTCACACTCTGTAGCAACATGTTATTCAGGCCCCCTTCTCTAG
TAGTAACCTGCTTCTGGCCGCCTGAACGGAGATGATGCGGGAGGTAATTT
TTTGCGTGGGCCATGCGGCAGCTTGGAAAGTAAAATTGTGCAAAATATGG
CACCAATCTTGTTGAACTTACCTCCACGGGGGAAATTTTGGGATACTTGG
CTCGCGCTGATCGATGCGCCGCTTCCTTTCCCTCAACCAGGCCCTCACGG
AAGCGTTTGCCTCGAGATACCGCTTGGCTGGATCGGCATCCCCCGGCGGC
GGCGACAGCGCTGGCAGCAGCTCGTCACAAGATTTGAGCAGCCCTCGGTC
GGACGTGGCAGCGTTGGACGAGTTCGCGGCGGTGCCCTTCTTAGACCACG
AGCTATTCATGCTTGTCCGGGCGATAGAGAAGGAGCGACTCGGGGAAGAA
GACGGAGCGGGGAAAGAAGAAGAGCCCGCAAGCGGCCGCGGCAGCAGCAG
CAGCAGCGCTGCGCCGGCAGCAGACGACGACGGCGAGACGCGTCTGTGTG
AGAGGCCCGCGGCGTGCCTCGAGTACCTCCTGACGTCTCAAGCGGTCCGG
GTGCGCGCGGACGAGAGCATGGAGAGGGGGCTGGAGAAAAAAGCGGCTGC
GTCTTTGGAAGAGGCGAACGGCCTCATGGAGGCGTTCTTGAAAGAGGGAC
ACCGACTTCCAAGGCCCAGCAGGCATGTATGGGCCGCATCTGTGGCAAGA
GATACAGATATTGTCGGCGTTTTTTCCTGGGAAAAAGGATCGAGCGGGAG
ACATCCATTCCATCGTGTAGGCCTCATGTGTTCCACGGTATGCTGTACTC
GCCGGCGCAAATATGGATGCCCTTTTTCAAGCGTGTGTGCTGGGAGTTTG
GAAAGTTTTTAGGCACACAAATGATGTGCGCCAACGAGTCTCGCGGTAAG
GAGGCGAGTGTTGCTGGGGGTCTCGCAACGAAACGGGAGTGCACTCGCGG
GCGTCGGCACCGAGATTAATCGGGCCTCTCTCTCTGTCTCTCTCTCTCTC
TCTGTCTCTCTCTCTCTCTCTCTCTCTCCTTCCCGTCCCTCCCTCCCTCC
CTCCCTCCCCCTCTCTCCGCCACAACCTCCTCCCCCCATCCGTCCAGACA
CCTTGCTGAGCTTCGCGCCGGCCTAGCCAAGTGCGAGATGCGCGGCGGAG
ACCTGGAGGCCGCGGTCGCCCACGCGGAGGCAGCCCTGGCGGAACACCCC
GCCTGCGGGGACGCGTTCCTGATCAGGGGACAGTGCCGCCGCGAGCTGGG
CGACAACAGCGGCGCGCTGAGCGACCTGGTGAACGCCTTCGTGCTGCAGG
GGAACGCCTTGAACAACGCCGGGGACGGGTCGGAAGCCCAGGCCATAGAA
GACGTCTCGCGGGAGAGCTGCAGGGAGAGGGCAGGGTGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7619:151..2989- >mRNA_E_fasciculatus_S2_contig7619.15785.1 ID=mRNA_E_fasciculatus_S2_contig7619.15785.1|Name=mRNA_E_fasciculatus_S2_contig7619.15785.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1527bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7619:151..2989- (Ectocarpus fasciculatus EfasUO2) GCAGCAGCTGCCGCCTGTGTTAGTCAGCTGCTGATCGTGGGCGAGATGTG CAGCGTGTTCTTCGAAGTTGTAGAGCCTCTGGACCATGCCACGTTCCTGA GCGTGTGCGACGAAGTGCTTCGAGACAGCCTCCTCCTGCTGGCTCCCTTT GGACTTCCCAGACACCTGCGCGAGGCCCTCGGTAGCGAGAACGAGTTCAT CCGACTGTACGGCCCGAGGTTCAGGTTTATATTGGAAGCCGTGTCAGATG CCACGTACAAGGAGCGGGGTGTTACGGAGAGCCAGGTTGCGGTCACCCTG CACAAGCTTACGGAAGAAGAGGAGAACCCGGAAGCGATGGCCTACCTGGC CAGGATGGCCGACTCCCTCCGGGAAATCTACTCGCCCCCCCGCGTCCTCG AGCTCCCGGCGCGAGCACCCACCTCGACGGCCGACTTGGCCGCCATCGGT TCTAGCCTTGTAGGGGCGGGCGCCGTCTACACGCCGGGGCCGCAGCAAGT GGGTCGTCGCGGGGGGGGAGGAGGAGGAGGAAGAGGGGCACCTCTTTGCG ACGGCACGCCGCCGCAGCCAAGCCACCCGGGGCACGCAGGGTGCGGTCGG GGGGAGAACAGCGTCGCTGACGATGCGGAGGAGCCAGACCACGACAAGGC GAGGCGCGACAGGGTGGCGTCATGCTTGTCGGCCTTGCGTCGCTCTCGGG AGGGGCTTGAGGTGTTCTCCGATGGGCTCGAACAGGCGCACATTCAGGCC CTCACGGAAGCGTTTGCCTCGAGATACCGCTTGGCTGGATCGGCATCCCC CGGCGGCGGCGACAGCGCTGGCAGCAGCTCGTCACAAGATTTGAGCAGCC CTCGGTCGGACGTGGCAGCGTTGGACGAGTTCGCGGCGGTGCCCTTCTTA GACCACGAGCTATTCATGCTTGTCCGGGCGATAGAGAAGGAGCGACTCGG GGAAGAAGACGGAGCGGGGAAAGAAGAAGAGCCCGCAAGCGGCCGCGGCA GCAGCAGCAGCAGCGCTGCGCCGGCAGCAGACGACGACGGCGAGACGCGT CTGTGTGAGAGGCCCGCGGCGTGCCTCGAGTACCTCCTGACGTCTCAAGC GGTCCGGGTGCGCGCGGACGAGAGCATGGAGAGGGGGCTGGAGAAAAAAG CGGCTGCGTCTTTGGAAGAGGCGAACGGCCTCATGGAGGCGTTCTTGAAA GAGGGACACCGACTTCCAAGGCCCAGCAGGCATGTATGGGCCGCATCTCT TCGCGCCGGCCTAGCCAAGTGCGAGATGCGCGGCGGAGACCTGGAGGCCG CGGTCGCCCACGCGGAGGCAGCCCTGGCGGAACACCCCGCCTGCGGGGAC GCGTTCCTGATCAGGGGACAGTGCCGCCGCGAGCTGGGCGACAACAGCGG CGCGCTGAGCGACCTGGTGAACGCCTTCGTGCTGCAGGGGAACGCCTTGA ACAACGCCGGGGACGGGTCGGAAGCCCAGGCCATAGAAGACGTCTCGCGG GAGAGCTGCAGGGAGAGGGCAGGGTGA back to top
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