prot_E_fasciculatus_S2_contig7121.15300.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7121.15300.1
Unique Nameprot_E_fasciculatus_S2_contig7121.15300.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length769
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 747 bits (1928), Expect = 3.720e-254
Identity = 433/794 (54.53%), Postives = 528/794 (66.50%), Query Frame = 0
Query:    1 MLHMRVPGAALALVGSHVDQMEEKDADEAGANLHT---------------VVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLRGTTPCVLWDEAMRVFIERMGGSMP---DGGEVLLRAMQHREAEGGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMVLSDLELDSVVSTMARLLVMYGSSETDKLVVPARHPEYGPERVVVRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLR------YAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAETKPTLLKHLRDL----RALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQA--DGNSERIQRVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQEFMELQGTAYKFLCDFMQEAEPSTPRRLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRN-SNGRWAWVLKKNEEAYCRANGDA-ASAGS 762
            MLHMRVPGAA+ALVGSHVDQME +DA +A  +LHT               VVSKFI++KA NAS RQS RCI A      + DH RD        GS   +A PL LH +VFKVSL  TSV ELRQWIVKAAS +ECP GFNFPAVDQ V KAWIEAY+AMDVL+GT PCVLW  A+  F  +M G  P   D G+VLLRAMQHREAEGGVLLSLA+ S PV +DMLHLDP+WLIELVRRL DHNLVD DK+K+  ++  LR YA +Q ++ A L++ H  Y RSG LN AYLRFLW+HRKI+G     + L+D E +S+VSTM RLLVMY + + D LVVPAR  EYG +R+    PD +T++VL ++CSFGQVYPPPGIVGRFLAWS QQV  + ECWQHGAF  Y Y   +Y VFLYES  EE  +      +AGLTLG+Q P   A  VLEEL+ SL+ LV+D AYGYPGL   M F    E + +LL  L  +                 XXXXXX              QL++Q+L  A  ++  YP  RLV++ P+ +   D   ERIQR GWDRW KA     L ++G H KFR+ FLC H L EVPCGP G G+PI+  +DWVKQ +PLM+ SLW+LRVAVG VS+VDLPLN+VL A V ATGA +L+ +G +VP+ + S  +PVF EGAT  +   F +L+G +Y+ LC FM++ E S P+ LS CLPC R           V+W+D MVQVRN S GR AWVLK NE+A+ R +G A A+AG+
Sbjct:  391 MLHMRVPGAAVALVGSHVDQMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTAPCVLWSRAVEEFRRKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEG-PGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRI----PDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGPMYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETVRKLGGIVTQLLEQDLLPASDEQSAYP--RLVLVRPELETAEDMTHERIQRAGWDRWTKA-----LSEMGFH-KFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVG-KVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPCHR-------TLAVVDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHGGAPATAGA 1163          
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.130e-92
Identity = 240/707 (33.95%), Postives = 360/707 (50.92%), Query Frame = 0
Query:   86 SATPLALHSHVFKVSLDRTS-VTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLRGT--TPCVLWDEAMRVFIERMGGSMPDGGEV--------------LLRAMQHREAEGGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAG---LWETHKEYRRSGCLNPAYLRFLWIHRK--IQGIQSSAMVLSDLELDSVVSTMARLLVMYGS-----SETDKLVVPARHPEYGPERVVVRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETL-----RYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVP-------DGQADGN-SERIQ-RVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQE--FMELQGTAYKFLCDFMQEAEPSTPR-RLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEE 748
            S  PL LH  VF  SL   + +  L  WI+  A  +     F+FPAV  ++P AW++A  A++ L     TP VLW +A+R F         + G+               L  AM+HREAEGGV+LSL + S+P  +DM+H+DP WLIELVRR+TDHNLVD  K+KQ+ I  +L EY   +  +++G   L ETH  + R G LN  YLRFLW+HRK  ++G  + A +  D   DS+V TM + L +Y S     +  D  +VPAR PE+G + ++      + ++V+     F + + P GI+GRFLA+++ +     +CWQHGA +++  DS ++ V L E+  E+ +      +  + + V+  +A A+ VL E+   L  L+ D  +GYPGL+  +              H    R L     ++++                         +  F +     + PYPRLV+L P       + QA+ + +  IQ R  WDRW      + L   G    F L FLCE    E+PCGP G G+ +           PL++ +LW++++AVGTV+SVDLPL+ VLEA + AT A VL+   ++            F   AT+++ Q+  F EL G AYK LCDFM + E      R  +CLP  RP      +    +W+  M  ++N  G ++WV K +E+
Sbjct: 1467 STHPLILHPRVFCASLGLDNRIGRLSDWIIGVAPEKI---SFSFPAVATILPAAWVDAIAAVEALHKEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLVD--KKKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDA-FDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEES-IGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPGQSTFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLRLPIFEELNITQSDQFQVHFE--RYLATQLAKILEDTRRESVRMF---------------RAAFPSYGDPVELPYPRLVLLKPVETTSIQETQAEESVNGAIQLRRTWDRW------IDLCRSGGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVLEAAPSQ------------FSPSATLDEGQQEGFKELHGPAYKALCDFMTKEEFGPEEARCESCLPWYRPRVHE-PIPSEFDWRSHMEMIKNGIG-YSWVRKSSEQ 2129          
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 4.210e-82
Identity = 226/704 (32.10%), Postives = 337/704 (47.87%), Query Frame = 0
Query:   89 PLALHSHVFKVSLDRTS-VTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLRGTTPCVLWDEAM----RVFIERMGGSMPD----------GGEVLLRAMQHREAEGGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAG---LWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMV-LSDLELDSVVSTMARLLVMYGS-SETDKL----VVPARHPEYGPERVVVRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETL-----RYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAY----GYPGLKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQADGNSERIQRVG--------WDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQE--FMELQGTAYKFLCDFMQEAEPSTPR-RLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEE 748
            PL LH  VF+ SL   + V  L  WI+  ++ +     F+FPAV  ++P AW                VLW +A+    R F E+      D              L  AM+HREAEGGV+LSL   S+P  +DM+H+DP WLI+LVRR+TDHNLVD  K+ + +I  +L EY   +  +++G   L ETH  + R G LN  YLRFLW+HRK++     A V L +   DS+V TM + L +Y S  E  K     +VPAR PE G + V+      + ++V+     F + + P GI+G FLA+++ +     ECWQHGA +++  DS ++ + L E+  E+ +         + + V+  +A A+ VL E+   L  L+ D  +     Y   K + +  DT        + +R  RA   +  E V+                                       YPRLV+L P         +++ V         WDRW      + L   G    F L  LCE    E+PCGP G G+ +           PL++ +LW++++AVGTV+SV LPL+ VLEA + AT A VL+   ++            F   AT+++ Q+  F EL G AYK LCDFM++ E      +   CLP  RP      L+   +W+  M +++N  G ++WV K +E+
Sbjct:   42 PLILHPRVFRASLGLDNRVNRLSDWIIDVSTEKI---SFSFPAVATILPSAW----------------VLWGDAVKAFQRYFQEKHKEEREDERNKPLSDEEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLVD--KKNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEES-IGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGTLPAIAICVKGKTAEAKGVLREVGEQLLSLLKDVIHVHFERYLATKLATILEDTRR------ESVRMFRAAFPSYGEHVELL-------------------------------------YPRLVLLKPVETTSIQETQVESVSGAKKLRRTWDRW------IDLCWSGGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVLEAAPSQ------------FSPSATLDEGQQEGFKELHGPAYKALCDFMRKEEFGPEEAQCCPCLPWHRPRVHEPILS-EFDWRSHMYKIKNGVG-YSWVRKSSEQ 660          
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.170e-34
Identity = 193/787 (24.52%), Postives = 327/787 (41.55%), Query Frame = 0
Query:    2 LHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVS---KFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPK------AWIEAYNAMDVLRGT-------------------TPCVLWDEAMRVFIE------RMGGSMPDGGEVLLRAMQHREAEGGVLLSLANPSN------PVGTD--MLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQK-ISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQ-GIQSSAMVLSDLEL-DSVVSTMARLLVMYG-----SSETDKLVVPARHPEYGPERVVVRP--PDNVTDIVLTVQCSFGQVYP-PPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKF------------------SMLFGDTAETKPTLLKHLRDL------------RALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPD---GQADGNSERIQRVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIE--QLRDWVKQCVPLMKASLWILRVAVGTVSSVD-LPLNQVLEAAVKATG---AAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQEFMELQGTAYKFLCDFMQEAE 696
            L  RVPG+ + LVG+H D M +  AD +  ++   V    K   E+A+  S   S+R    AG   +    P   V+  + L    ++ TP               +  +L++     A       G++FP+V+  VP+      A +EA      LRG+                    P +L+ EA+ +F+E        GG+  +G +  L A+   E +G +L++ A+         P      ++H++PAW  +L+RR+ D  L+D  ++++      L E   +Q   S+A L + H  +  +G ++  Y++FLW  R ++ G  S ++     E+ +  ++TM   L+            D  +VP+  P++    V  +     +V   + + +   G   P PPG++ R LAW +Q       CW+ G    ++    ++ V LYE   E             A +  A   L+++ A L+ LV DP YG+PG+                     +L     E K  +  + ++L            R L   QEE+                        +  + L  ++   K  P PRL++++ D   G A       +R   D+  +       P       +R+RFLC + L    CG DGLGY +E    ++W+K C+P++K SLW+LRV +  V+  D LP++ V+E   +  G   A +L E+  E   S   D V          Q+Q F    GTAY  L  ++Q+ E
Sbjct:  334 LQARVPGSVVLLVGTHSD-MFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDR--EYAGVQDSRRYQPLRIVVVDELLA---LNLTPSG-----------GVTTAQLQEHFEGVAYGVH--DGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEK------LAEVIKRQSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFN---RKHLVLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSV--EKDIPCPRLIMVLEDVSPGSALSRLSHFRRDMVDKLLRREGEGPAPQC-----YRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEEAAGILGEIDLEGRRSSGQDLVDKVN-----AQEQVF----GTAYAELAKWVQQRE 1076          
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 4.890e-33
Identity = 172/710 (24.23%), Postives = 303/710 (42.68%), Query Frame = 0
Query:    2 LHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRT---SVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR---------------------GTT-----PCVLWDEAMRVFIE------RMGGSMPDGGEVLLRAMQHREAEGGVLLSLANPSNPVGTDM-------LHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSA-----MVLSDLELDSVVSTMARLLVMYGSSET-DKLVVPARHPEY-----GPERVVVRPPDNVTDIVLTVQCSF-GQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFG------DTAETKPTLLKHLR-DLRALLDNQ-EELVDKXXXXXXXXXXXXXXXXXXXXQL-----VQQELFAAIAKR-------KKYPYPRLVILVPDGQADGNSERIQRVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIE--QLRDWVKQCVPLMKASLWILRVAVGTVSSVD-LPLNQVL 634
            L  RVPG+ + L+G+H D  +     E    +   V   +    KN  M++     +AA    AD  H       VQ   +R      + +   +  ++L  +   +  ELR+ I   A       G++FP+V+  VP+  + A   ++ +R                     GT      P VL+ EA+  F+E        GG   +G  V L A++  E +G +LL+ A+    +  DM       +H++PAW  +L+RR+ D  L+D  + +Q+ +   ++    +   S+  L + H  +  +G LN  Y+RFLW  R ++   +S      + +S+ ++ ++V ++  +  M+   +  D  +VP+  P++      P++++      V   + + +  F G    PPG++ R LAW  Q       CW+ G    +     ++ V LYE             +G  A    A   LE++   L  LV D  YG+PG+    + G       +AET   LL     +L+  ++ + EEL  K                     L     +Q +  AA+          K  P PRL+++  D   + +  R+        ++  + L L        +R+RFLC + L    CG DGLGY +E    + W+++ +P+++ +LW +RV V  VS  D LP++ V+
Sbjct:  162 LQARVPGSVVLLMGTHSDSFD--SPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAA----ADRGHA-----GVQD--NRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVH--DGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEM-EDMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADLIK---RQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLPDHVGCDMDPKKLMEL---EVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFK----EHLVLLYEHRDAGRAVIECHAMG-SAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAEKDIPCPRLIMVSEDDVPESDQSRLSHFR----REMMDQLFLGKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVM 840          
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.500e-8
Identity = 113/416 (27.16%), Postives = 167/416 (40.14%), Query Frame = 0
Query:    5 RVPGAALALVGSHVDQMEEKDADEAGA--NLHTVVSKFIEEK----------AKNASMRQSNRC-IRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKV----SLDRTSVTELRQW-IVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR-GTTP--CVLWDEAM--------RVFIERMGGSMP----DGGEVL-LRAM----QHREAEGGVLLSLANPSNPVGTDML------HLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMVLSDLELDSVVSTMARLLVMY-----GSSETDKLVVPARHPEYGPERVVVRPPDNV---TDIVLTVQCSFGQVYPPPGIVGRFL 368
            RVPG+ + +V +H D   +     A A   L   ++  ++EK          A+ A     +RC   A+G+T   T +P D             +A P  L    F +    SL+  SV   + W I   AS         FP + Q VPK+W   +  MD LR G  P   V  D  +        R F+ R          DG  V  L+A     Q  + +   L   A     +G  +L      HL+ AW+ EL+R L DH L D  + K      QL+ Y + + +    L   H+ +  +G L   YLRFLW  R+++ +Q   +       D +V TMA    M+     G  E  + +VPAR P       +    + V   T +   +    G  Y PPGI+ +FL
Sbjct:  290 RVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGST---TGYPAD-----------HAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASL--------FPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKW--WVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLW--REVKAVQDEEV------FDRLVDTMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAG--YVPPGIIPQFL 671          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LKS5_ECTSI3.720e-25454.53LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LK68_ECTSI1.130e-9233.95LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JR01_9PHAE4.210e-8232.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPJ1_9PHAE2.170e-3424.52Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE4.890e-3324.23Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FUH6_ECTSI2.500e-827.16LRR-GTPase of the ROCO family, incomplete sequence... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 471..498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7121contigE_fasciculatus_S2_contig7121:943..4102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7121.15300.1mRNA_E_fasciculatus_S2_contig7121.15300.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7121 508..5027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7121.15300.1 ID=prot_E_fasciculatus_S2_contig7121.15300.1|Name=mRNA_E_fasciculatus_S2_contig7121.15300.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=769bp
MLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASM
RQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVS
LDRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR
GTTPCVLWDEAMRVFIERMGGSMPDGGEVLLRAMQHREAEGGVLLSLANP
SNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQ
KISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMVLSDLELD
SVVSTMARLLVMYGSSETDKLVVPARHPEYGPERVVVRPPDNVTDIVLTV
QCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVF
LYESIAEETLRYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPG
LKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKLGKTVDRLEETAS
KLVGVANQLVQQELFAAIAKRKKYPYPRLVILVPDGQADGNSERIQRVGW
DRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRD
WVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMG
TEVPNSVDSDPVPVFGEGATVEQKQEFMELQGTAYKFLCDFMQEAEPSTP
RRLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEEAY
CRANGDAASAGSARPPIS*
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