mRNA_E_fasciculatus_S2_contig7121.15300.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 981 bits (2537), Expect = 0.000e+0 Identity = 549/944 (58.16%), Postives = 650/944 (68.86%), Query Frame = 1
Query: 1 SNPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFTGGPVPTRPDRTVGIEITPAWRPVDECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGANLHT---------------VVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLRGTTPCVLWDEAMRVFIERMGGSMP---DGGEVLLRAMQHREAEGGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMVLSDLELDSVVSTMARLLVMYGSSETDKLVVPARHPEYGPERVVVRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLR------YAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAETKPTLLKHLRDL----RALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQA--DGNSERIQRVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQEFMELQGTAYKFLCDFMQEAEPSTPRRLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRN-SNGRWAWVLKKNEEAYCRANGDAASAGSARPPIS 2739
+NPWSRPPSTVLESG+ RALGWWEDVKRFGEGKSNKLK+VLVG+A AGKTTIVRH TG VP R DRTVGIEIT W+P DE LQVSVWDFAGQ DYYSSHQLFLTKGALFLLVVDL F E+ SGV NF D RRIYWWLEMLHMRVPGAA+ALVGSHVDQME +DA +A +LHT VVSKFI++KA NAS RQS RCI A + DH RD GS +A PL LH +VFKVSL TSV ELRQWIVKAAS +ECP GFNFPAVDQ V KAWIEAY+AMDVL+GT PCVLW A+ F +M G P D G+VLLRAMQHREAEGGVLLSLA+ S PV +DMLHLDP+WLIELVRRL DHNLVD DK+K+ ++ LR YA +Q ++ A L++ H Y RSG LN AYLRFLW+HRKI+G + L+D E +S+VSTM RLLVMY + + D LVVPAR EYG +R+ PD +T++VL ++CSFGQVYPPPGIVGRFLAWS QQV + ECWQHGAF Y Y +Y VFLYES EE + +AGLTLG+Q P A VLEEL+ SL+ LV+D AYGYPGL M F E + +LL L + XXXXXX QL++Q+L A ++ YP RLV++ P+ + D ERIQR GWDRW KA L ++G H KFR+ FLC H L EVPCGP G G+PI+ +DWVKQ +PLM+ SLW+LRVAVG VS+VDLPLN+VL A V ATGA +L+ +G +VP+ + S +PVF EGAT + F +L+G +Y+ LC FM++ E S P+ LS CLPC R V+W+D MVQVRN S GR AWVLK NE+A+ R +G A + A P+S
Sbjct: 247 ANPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTGRSVPKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEIG-SGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTAPCVLWSRAVEEFRRKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEG-PGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRI----PDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGPMYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETVRKLGGIVTQLLEQDLLPASDEQSAYP--RLVLVRPELETAEDMTHERIQRAGWDRWTKA-----LSEMGFH-KFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVG-KVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPCHR-------TLAVVDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHGGAPATAGA--PVS 1166
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 328 bits (842), Expect = 5.250e-89 Identity = 240/707 (33.95%), Postives = 360/707 (50.92%), Query Frame = 1
Query: 691 SATPLALHSHVFKVSLDRTS-VTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLRGT--TPCVLWDEAMRVFIERMGGSMPDGGEV--------------LLRAMQHREAEGGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAG---LWETHKEYRRSGCLNPAYLRFLWIHRK--IQGIQSSAMVLSDLELDSVVSTMARLLVMYGS-----SETDKLVVPARHPEYGPERVVVRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETL-----RYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVP-------DGQADGN-SERIQ-RVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQE--FMELQGTAYKFLCDFMQEAEPSTPR-RLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEE 2679
S PL LH VF SL + + L WI+ A + F+FPAV ++P AW++A A++ L TP VLW +A+R F + G+ L AM+HREAEGGV+LSL + S+P +DM+H+DP WLIELVRR+TDHNLVD K+KQ+ I +L EY + +++G L ETH + R G LN YLRFLW+HRK ++G + A + D DS+V TM + L +Y S + D +VPAR PE+G + ++ + ++V+ F + + P GI+GRFLA+++ + +CWQHGA +++ DS ++ V L E+ E+ + + + + V+ +A A+ VL E+ L L+ D +GYPGL+ + H R L ++++ + F + + PYPRLV+L P + QA+ + + IQ R WDRW + L G F L FLCE E+PCGP G G+ + PL++ +LW++++AVGTV+SVDLPL+ VLEA + AT A VL+ ++ F AT+++ Q+ F EL G AYK LCDFM + E R +CLP RP + +W+ M ++N G ++WV K +E+
Sbjct: 1467 STHPLILHPRVFCASLGLDNRIGRLSDWIIGVAPEKI---SFSFPAVATILPAAWVDAIAAVEALHKEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLVD--KKKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDA-FDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEES-IGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPGQSTFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLRLPIFEELNITQSDQFQVHFE--RYLATQLAKILEDTRRESVRMF---------------RAAFPSYGDPVELPYPRLVLLKPVETTSIQETQAEESVNGAIQLRRTWDRW------IDLCRSGGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVLEAAPSQ------------FSPSATLDEGQQEGFKELHGPAYKALCDFMTKEEFGPEEARCESCLPWYRPRVHE-PIPSEFDWRSHMEMIKNGIG-YSWVRKSSEQ 2129
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE) HSP 1 Score: 285 bits (728), Expect = 2.770e-79 Identity = 226/704 (32.10%), Postives = 337/704 (47.87%), Query Frame = 1
Query: 700 PLALHSHVFKVSLDRTS-VTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLRGTTPCVLWDEAM----RVFIERMGGSMPD----------GGEVLLRAMQHREAEGGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAG---LWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMV-LSDLELDSVVSTMARLLVMYGS-SETDKL----VVPARHPEYGPERVVVRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETL-----RYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAY----GYPGLKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQADGNSERIQRVG--------WDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQE--FMELQGTAYKFLCDFMQEAEPSTPR-RLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEE 2679
PL LH VF+ SL + V L WI+ ++ + F+FPAV ++P AW VLW +A+ R F E+ D L AM+HREAEGGV+LSL S+P +DM+H+DP WLI+LVRR+TDHNLVD K+ + +I +L EY + +++G L ETH + R G LN YLRFLW+HRK++ A V L + DS+V TM + L +Y S E K +VPAR PE G + V+ + ++V+ F + + P GI+G FLA+++ + ECWQHGA +++ DS ++ + L E+ E+ + + + V+ +A A+ VL E+ L L+ D + Y K + + DT + +R RA + E V+ YPRLV+L P +++ V WDRW + L G F L LCE E+PCGP G G+ + PL++ +LW++++AVGTV+SV LPL+ VLEA + AT A VL+ ++ F AT+++ Q+ F EL G AYK LCDFM++ E + CLP RP L+ +W+ M +++N G ++WV K +E+
Sbjct: 42 PLILHPRVFRASLGLDNRVNRLSDWIIDVSTEKI---SFSFPAVATILPSAW----------------VLWGDAVKAFQRYFQEKHKEEREDERNKPLSDEEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLVD--KKNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEES-IGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGTLPAIAICVKGKTAEAKGVLREVGEQLLSLLKDVIHVHFERYLATKLATILEDTRR------ESVRMFRAAFPSYGEHVELL-------------------------------------YPRLVLLKPVETTSIQETQVESVSGAKKLRRTWDRW------IDLCWSGGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVLEAAPSQ------------FSPSATLDEGQQEGFKELHGPAYKALCDFMRKEEFGPEEAQCCPCLPWHRPRVHEPILS-EFDWRSHMYKIKNGVG-YSWVRKSSEQ 660
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 259 bits (661), Expect = 3.490e-67 Identity = 259/944 (27.44%), Postives = 415/944 (43.96%), Query Frame = 1
Query: 4 NPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFTG----GPVPTRPDRTVGIEITP---AWRPVD-----ECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVS---KFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPK------AWIEAYNAMDVLRGT-------------------TPCVLWDEAMRVFIE------RMGGSMPDGGEVLLRAMQHREAEGGVLLSLANPSN------PVGTD--MLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQK-ISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQ-GIQSSAMVLSDLEL-DSVVSTMARLLVMYG-----SSETDKLVVPARHPEYGPERVVVRP--PDNVTDIVLTVQCSFGQVYP-PPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKF------------------SMLFGDTAETKPTLLKHLRDL------------RALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPD---GQADGNSERIQRVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIE--QLRDWVKQCVPLMKASLWILRVAVGTVSSVD-LPLNQVLEAAVKATG---AAVLDEMGTEVPNSVDSDPVPVFGEGATVEQKQEFMELQGTAYKFLCDFMQEAE 2523
NPW+ PP+ VLE G A + +D+ FG SN+LK+VLVG+ AGKT++ G P+PT +RTVG+EI A P + L V +WDFAGQ YY +HQ+FLT GALF+LVVD+ Y E S R + WL++L RVPG+ + LVG+H D M + AD + ++ V K E+A+ S S+R AG + P V+ + L ++ TP + +L++ A G++FP+V+ VP+ A +EA LRG+ P +L+ EA+ +F+E GG+ +G + L A+ E +G +L++ A+ P ++H++PAW +L+RR+ D L+D ++++ L E +Q S+A L + H + +G ++ Y++FLW R ++ G S ++ E+ + ++TM L+ D +VP+ P++ V + +V + + + G P PPG++ R LAW +Q CW+ G ++ ++ V LYE E A + A L+++ A L+ LV DP YG+PG+ +L E K + + ++L R L QEE+ + + L ++ K P PRL++++ D G A +R D+ + P +R+RFLC + L CG DGLGY +E ++W+K C+P++K SLW+LRV + V+ D LP++ V+E + G A +L E+ E S D V Q+Q F GTAY L ++Q+ E
Sbjct: 185 NPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDI-FAYSEDGHS-------REDALEQWLDILQARVPGSVVLLVGTHSD-MFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDR--EYAGVQDSRRYQPLRIVVVDELLA---LNLTPSG-----------GVTTAQLQEHFEGVAYGVH--DGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEK------LAEVIKRQSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFN---RKHLVLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSV--EKDIPCPRLIMVLEDVSPGSALSRLSHFRRDMVDKLLRREGEGPAPQC-----YRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEEAAGILGEIDLEGRRSSGQDLVDKVN-----AQEQVF----GTAYAELAKWVQQRE 1076
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.430e-66 Identity = 237/868 (27.30%), Postives = 393/868 (45.28%), Query Frame = 1
Query: 1 SNPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFTG----GPVPTRPDRTVGIEIT-------PA-WRPVDECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRT---SVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR---------------------GTT-----PCVLWDEAMRVFIE------RMGGSMPDGGEVLLRAMQHREAEGGVLLSLANPSNPVGTDM-------LHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSA-----MVLSDLELDSVVSTMARLLVMYGSSET-DKLVVPARHPEY-----GPERVVVRPPDNVTDIVLTVQCSF-GQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFG------DTAETKPTLLKHLR-DLRALLDNQ-EELVDKXXXXXXXXXXXXXXXXXXXXQL-----VQQELFAAIAKR-------KKYPYPRLVILVPDGQADGNSERIQRVGWDRWKKAWESLSLPDVGLHHKFRLRFLCEHSLEEVPCGPDGLGYPIE--QLRDWVKQCVPLMKASLWILRVAVGTVSSVD-LPLNQVL 2337
+NPW+ PP+ VL+ G A + +D++ FG SN+LK+VLVG+ AGKT++ G P+P+ +RTVG+EI PA R L V +WDFAGQ YY +HQ+FLT GALF+LVVD+ Y E S R + WL++L RVPG+ + L+G+H D + E + V + KN M++ +AA AD H VQ +R + + + ++L + + ELR+ I A G++FP+V+ VP+ + A ++ +R GT P VL+ EA+ F+E GG +G V L A++ E +G +LL+ A+ + DM +H++PAW +L+RR+ D L+D + +Q+ + ++ + S+ L + H + +G LN Y+RFLW R ++ +S + +S+ ++ ++V ++ + M+ + D +VP+ P++ P++++ V + + + F G PPG++ R LAW Q CW+ G + ++ V LYE +G A A LE++ L LV D YG+PG+ + G +AET LL +L+ ++ + EEL K L +Q + AA+ K P PRL+++ D + + R+ ++ + L L +R+RFLC + L CG DGLGY +E + W+++ +P+++ +LW +RV V VS D LP++ V+
Sbjct: 12 NNPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRLGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDM-FAYSEDGHS-------REDALEQWLDILQARVPGSVVLLMGTHSDSFD--SPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAA----ADRGHA-----GVQD--NRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVH--DGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEM-EDMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADLIK---RQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLPDHVGCDMDPKKLMEL---EVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFK----EHLVLLYEHRDAGRAVIECHAMG-SAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAEKDIPCPRLIMVSEDDVPESDQSRLSHFR----REMMDQLFLGKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVM 840
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 204 bits (518), Expect = 1.430e-49 Identity = 237/993 (23.87%), Postives = 394/993 (39.68%), Query Frame = 1
Query: 1 SNPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFT---GGPVPTRPDRTVGIEITPAWR---PVDE-----CRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSL---DRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR--------GTT-----------------PCVLWDEAMRVFIERMGGSMPD-------GGE---VLLRAMQHREAEGGVLL--------SLANPSNPVGTD------MLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSA---MVLSDLELDSVVSTMARLLVMYGSSETDKLVVPARHPEYG--PERVVVR-PPDNVTDIVLTVQCS------FGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGL-TLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQADGNSERIQRVGWDRWKKAWESLSLPDVGLH-----HKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGE--------------GATVEQKQEFMELQGTAYKFLCDFMQEAEPSTPRRLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEEAYCRA 2694
+NPW PP+ V+ G A + D+ +G SN+LK+VLVG+ EAGKT+I G P +RTVG+EI P +E L VS+WDFAGQ YY +HQ+FLT GALF+LVVD+ + + R + WLE+L RVPG+ + LVG+H D E A+ K +EE + RC + +T+ ++ G+ + L + + L D + L+Q + A G++FP+V VVP+ ++ A ++ +R G T V + EA+ +F ++ G GE + L A++ EA G +LL S + +G ++H++P+ +LVRR+ D LVD +Q + E + + L + HK + ++G ++ YL+FLW+ G S + +S+ +++ +V ++ + MY + VP R+ P + + P + ++ + G PPG+V R LAW + CW+ G + + V LYE A + + G + AR L+++ + L+ D YG+PGL + E++ T++ D +ALL E +VD + Q F ++P PRLV ++P ++ + +++W + + K R+ FLC + CGP G GY + +L W K+ +P + + +A+ + +P EA + L + E NS + GE GA Q+ +QG Y+ L + ++ E R S P+ + K +V WAWV KN + + A
Sbjct: 320 NNPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTEG---------QSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAE--CTRRTDRFKKDVEE------IMTRLRCECDSAKDRVETELGEGHTTDLK--GNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLA--YNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDP---RQQAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFK----NHLVLLYEVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLVR----SGESEETVISSDSDHKALL---ERIVD-------VLRDQMNVKFMMDRSMRQDVAFL------RWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVD-FEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGGRAEGLPQGAGAHGAQQGWPSPVQGFTYETLKEVIKSFEVDGMRGRSPF--------------PSFDAKMHLVDRGGRGEEWAWVRTKNIDQFAGA 1249
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.260e-43 Identity = 242/1036 (23.36%), Postives = 405/1036 (39.09%), Query Frame = 1
Query: 1 SNPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFT---GGPVPTRPDRTVGIEI--------TPAWRPVDECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISAT------PLALHSHVFKVSLDRTS-----VTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR---------GTTPCVL----------------WDEAMRVF-----------IERMGGSM---------------------PDGGEVLLRAMQHREAEGGVLLSLAN------PSNPVGTD--------MLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSA---MVLSDLELDSVVSTMARLLVMYGSSETDKLVVPARH-----------PEYGPERVV-VRPPDNVTDIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGLTLGVQAP--SAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAET-------KPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQADGNSERIQRVGWDRWKKAWESLSL----PDVGLH-HKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWILRVAVGTVSSVDLPLNQVLEAAVKATGAAVLDEMGTEVPNSVDSDPVPVFGE---GATVEQ------KQEFMELQGT-------AYKFLCDFMQEAEPSTPRRLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEEAYCRA 2694
+NPW PP+ V++ G A + D+ +G SN+LK+VLVG+ AGKT+I GG P +RTVG+EI + L VS+WDFAGQ YY +HQ+FLT+GALF+LVVD+ + + + WL++L RVPGA L LVG+H D E+ A T + ++ + R S +C A A+T+ LG R PL + ++LD TS + L++ + A G++F +V VVP+ ++ ++ +R GT V+ + EA+ + + + S+ + + L A++ EA G +LL+ + VG ++H++P+ +LVRR+ D LVD +Q Q + + L + HK + ++G ++ YL+FLW+ G S + +S+ ++D +V ++ + MY + VP R+ PE P +++ ++ V L + G PPG+V R LAW + CW+ G + + V LYE +T + + + AR L ++ + L+ D YG+PGL ++ G++ E L+K + ++ N + ++D+ ++Q+L ++P PRLV ++P ++ + +D+W + L G+ K RL FLC + CGP G GY + +L W K+ +PL K L + A + + +P EA + L + NS + GE G T ++ Q F QG AY L + ++ E + R S P+ + K +V W+WV KN + + A
Sbjct: 25 NNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAEGHSPEDA---------VEQWLDILQARVPGAVLLLVGTHTDLFEDN------ATECTKRTDRFKKDVEKIMKRISCQCDSAKNL--AETE-----------LGERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLA--YNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDP---RQQVKVEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKL---VGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFK----NHMVLLYE--VRDTAGNSWIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGL--GLIRGESEEALVSSDGDHEALVKRIVNMLRDQMNVKFMMDRS---------------------IKQDLAFL-----RWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEAD-FEATLGTKAGGALSTFVEDSLNSGGESMASIAGERLDGGTADELLQGVGAQRFGAQQGWPSPVQAFAYDALKEVIKRFEVANMRDRSPF--------------PSFDVKMRLVDRGGQGAEWSWVRTKNIDQFVGA 975
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.600e-39 Identity = 235/995 (23.62%), Postives = 388/995 (38.99%), Query Frame = 1
Query: 4 NPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFTG---GPVPTRPDRTVGIEI----------TPAWRPVDECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKVSLDRTSVTELR---QWIVKAASAQECPPGFNFPA-----VDQVVPKAWIEAYNAMDVLRGTTPC-------------------VLWDEAMRVFIERMGGSM-----------PDGGEVLLRAMQHREAEGGVLL--------SLANPSNPVGTD------MLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHR---KIQGIQSSAMVLSDLELDSVVSTMARLLVMYGSSETDKLVVPARH-----------PEYGPERVVVRPPDNVTDIVLTVQCSFGQVYP-PPGIVGRFLAWSTQQVHCFDECWQHGAFLRYSYDSGQYRVFLYESIAEETLRYAGLTLGVQAPSAVARNVLEELKASLQLLVADPAYGYPGLKFSMLFGDTAETKPTLLKHLRDLRALLDNQEELVDKXXXXXXXXXXXXXXXXXXXXQLVQQELFAAIAKRKKYPYPRLVILVPDGQADGNSERIQRVGWDRWKKAWESLSLPDVGLH-----HKFRLRFLCEHSLEEVPCGPDGLGYPIEQLRDWVKQCVPLMKASLWI----LRVAVG-TVSSVDLPLNQVLEAA-VKATGAAVLDEMGTEVPNSVDSDPVP-------VFGEGATVEQKQEFMELQGTAYKFLCDFMQEAEPSTPRRLSACLPCCRPSTPPTDLTPTVNWKDSMVQVRNSNGRWAWVLKKNEEAYCRA 2694
NPW PP+ V+E G + +D+ +G N+LK+VLVG+ EAGKT+I G P +RTVG+EI P DE L VS+WDFAGQ YY +HQ+FLT GALF+LVVD+ F EV QS + + WLE+L RVPG+ + LVG+H D + A A T + +E S +N + + P D + + SA A + L T+L+ ++ +E N + +D + + AYN LRG+ V + EA+ +F + GSM + + L A++ EA G + L S + +G ++H++P+ +LVRR+ D LV +Q + E + S+ L + HK + ++G ++ YL+FLW+ + ++ + +S+ +++ +VS++ + MY + VP R+ P+ P +++ N + + + +V+ PPG+V R L+ C + V LYE A + + AR L+++ + L++D +PGL + E++ T++ D +ALL E +VD +L+ ++P PRLV ++P ++ +++W + L K R+ FLC + CGP G GY + +L +W K+ +P K L + LRV +G + VD +A +T A G E S+ D + G G Q++ +QG Y+ L + ++ E R S P+ + K +V WAWV KN + + A
Sbjct: 66 NPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGIGPNDE--LDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDM--FTYEVGQS-------KEDALEQWLEILQARVPGSIMLLVGTHTDLFK------ANAAECTRRTDSFKEGRSYCSTSSNNSYL---------SPWPTDVDDIMTRMRYECDSAKDRA------EAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNGGADLRGSGSTREAVAQRLREGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLV---APRQQAKVEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNA---IYSQKLKLVRVHAVPPGLVPRLLS-----------C---------------HLVLLYEVRATDGTSWIECHARGNVFDESARTALKDIGDQVDELISDHKNRFPGLGLVR----SGESEETVVYSDSDHKALL---ERIVD-------------VQRDQMNVKLMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHSGVESVASIAGDRLDGGRAEGLPHGAGGHGAQQEWPSPMQGITYETLKEVIKSFEVDGMRHRSPF--------------PSFDVKMRLVDRGGRGAEWAWVRTKNIDQFVGA 962
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: LRR-GTPase (of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 165 bits (418), Expect = 1.170e-37 Identity = 172/568 (30.28%), Postives = 250/568 (44.01%), Query Frame = 1
Query: 4 NPWSRPPSTVLESGYVRALGWWEDVKRFGE-GKSNKLKLVLVGVAEAGKTTIVRHFTGGP---VPTRPDRTVGIEITPAWRPVDECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGA--NLHTVVSKFIEEK----------AKNASMRQSNRC-IRAAGATAADTDHPRDAVISVQPLGSREISATPLALHSHVFKV----SLDRTSVTELRQW-IVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVLR-GTTP--CVLWDEAM--------RVFIERMGGSMP----DGGEVL-LRAM----QHREAEGGVLLSLANPSNPVGTDML------HLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMVLSDLELDSVVSTMARLLVMY-----GSSETDKLVVPARHPEYGPERVVVRPPDNV---TDIVLTVQCSFGQVYPPPGIVGRFL 1539
N W PP V++ G+ + + ++E + + G LK+VLVG AGKTT+ R G VP R V + I P W P + ++V +WDFAG +DYYS+HQLFLT G+L +LVVDL F VC+ + +Y WL+ L RVPG+ + +V +H D + A A L ++ ++EK A+ A +RC A+G+T T +P D +A P L F + SL+ SV + W I AS FP + Q VPK+W + MD LR G P V D + R F+ R DG V L+A Q + + L A +G +L HL+ AW+ EL+R L DH L D + K QL+ Y + + + L H+ + +G L YLRFLW R+++ +Q + D +V TMA M+ G E + +VPAR P + + V T + + G Y PPGI+ +FL
Sbjct: 147 NRWKNPPWQVIQGGWYQVISFYEGLAQSGGVAVVPSLKVVLVGAVHAGKTTLTRGLLDGKLAKVPPPRTRGVDVHINP-WTPNFDPAVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKF--------VCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGST---TGYPAD-----------HAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASL--------FPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKW--WVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLW--REVKAVQDEEV------FDRLVDTMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAG--YVPPGIIPQFL 671
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 164 bits (414), Expect = 3.400e-37 Identity = 168/590 (28.47%), Postives = 260/590 (44.07%), Query Frame = 1
Query: 4 NPWSRPPSTVLESGYVRALGWWEDVKRFGEGKSNKLKLVLVGVAEAGKTTIVRHFTGGPVP-TRPDRTVGIEI-TPAWRPVDECRLQVSVWDFAGQEDYYSSHQLFLTKGALFLLVVDLRIFYDEVRQSGVCNFNDRHRRIYWWLEMLHMRVPGAALALVGSHVDQMEEKDADEAGA--NLHTVVSKFIEEKAKN--ASMRQSNRCIRAAGATAADTDHPRDAVISVQPLGSREISATPLALHS----HVFKVSLDRTSVTELRQWIVKAASAQECPPGFNFPAVDQVVPKAWIEAYNAMDVL----------RGTTPCV------------------LWDEAMRVFIERMGGSMPDGGEVLLRAMQHREAE------GGVLLSLANPSNPVGTDMLHLDPAWLIELVRRLTDHNLVDNDKEKQDDIKGQLREYANKQKISMAGLWETHKEYRRSGCLNPAYLRFLWIHRKIQGIQSSAMVLSDLELDSVVSTMARLLVMY----GSSETD--KLVVPARHPEYGPERVVVRPPDNVT-----DIVLTVQCSFGQVYPPPGIVGRFLAWSTQQVH------CFDECWQHG 1590
NPW PP V++ G+ + + + E + + G LK+VLVG AGKTT+ R G + T P RT GI++ W P + L+V +WDFAG +DY+S+HQ+FLT GAL LLVVDL F +V G +Y WL+ L RVPG+A+ +V +H D + AGA L V++ +E K ++ A+ R R + + A+ RD +S P R A P +LH V SLD S + W V A FP+V ++VP W + MD L R P V +W A R ++ + G ++ L + +H +A GG +L++ ++HL+P+W+ L+R + DH L D ++++ QL+ Y + I + L ETH+ + +G L +LRFLW ++G+ +V TM M+ G +E + + +VPAR P+ + D ++ V+ + Y PP I+ +FL + F CW G
Sbjct: 153 NPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSRG--------GGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTG---RD-FMSESP-ADRSKPAPP-SLHLCGFISVSGRSLDGLSTVGEKIWEVANEPAV-------FPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCG--------LIHLNPSWINVLLREVLDHRLTDPNEDEW--WWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLW-RDVLKGVDEKVFA-------RLVETMTAHDAMFPCNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAK----YVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARG 699 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7121.15300.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7121.15300.1 >prot_E_fasciculatus_S2_contig7121.15300.1 ID=prot_E_fasciculatus_S2_contig7121.15300.1|Name=mRNA_E_fasciculatus_S2_contig7121.15300.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=769bp MLHMRVPGAALALVGSHVDQMEEKDADEAGANLHTVVSKFIEEKAKNASMback to top mRNA from alignment at E_fasciculatus_S2_contig7121:508..5027+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7121.15300.1 ID=mRNA_E_fasciculatus_S2_contig7121.15300.1|Name=mRNA_E_fasciculatus_S2_contig7121.15300.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4520bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7121:508..5027+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7121:508..5027+ >mRNA_E_fasciculatus_S2_contig7121.15300.1 ID=mRNA_E_fasciculatus_S2_contig7121.15300.1|Name=mRNA_E_fasciculatus_S2_contig7121.15300.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2307bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7121:508..5027+ (Ectocarpus fasciculatus EfasUO2)back to top |