prot_E_fasciculatus_S2_contig7050.15216.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7050.15216.1
Unique Nameprot_E_fasciculatus_S2_contig7050.15216.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length93
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7050.15216.1 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 8.320e-50
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    1 APIKGSSSETASIFCALLRENFVGCVKSTWRGPTYNPVNTELQRRRSSLLLPEFQDGQSSDEETANPHFGRGPSGPVRPTGPRRHTGRGPTT 92
            APIKGSSSETASIFCAL+RENFVGCVKSTWRGPTYNPV TELQRRRSSLLLPEFQ+GQSSDEETANPHFG+ PSGPV PTGPRRH GR PTT
Sbjct:  956 APIKGSSSETASIFCALVRENFVGCVKSTWRGPTYNPVQTELQRRRSSLLLPEFQEGQSSDEETANPHFGKRPSGPVHPTGPRRHAGRAPTT 1047          
BLAST of mRNA_E_fasciculatus_S2_contig7050.15216.1 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 4.640e-21
Identity = 54/92 (58.70%), Postives = 57/92 (61.96%), Query Frame = 0
Query:    1 APIKGSSSETASIFCALLRENFVGCVKSTWRGPTYNPVNTELQRRRSSLLLPEFQDGQSSDEETANPHFGRGPSGPVRPTGPRRHTGRGPTT 92
            APIKGSSSETASIF AL+RENF                              EFQ+GQSSDEETANPHFG+ PSGPV PTGPRRH GR PTT
Sbjct: 1320 APIKGSSSETASIFFALVRENFTA----------------------------EFQEGQSSDEETANPHFGKRPSGPVPPTGPRRHAGRAPTT 1383          
BLAST of mRNA_E_fasciculatus_S2_contig7050.15216.1 vs. uniprot
Match: A0A6H5JTC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC8_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.180e-5
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 0
Query:    3 IKGSSSETASIFCALLRENFVGCVKSTWRGPTYNPVNTELQRRRSSLLLPEFQDGQSSDEETANPHFGRGP 73
            IKGS  E   IFC L+RENF+GCVK + +GP   P ++       S  LP  ++ ++ D E A    GR P
Sbjct:  243 IKGSWGEACGIFCVLVRENFIGCVKESVQGPRRKPRSSFTLA--VSDRLPGIKEEENRDPEAAEGIIGRKP 311          
BLAST of mRNA_E_fasciculatus_S2_contig7050.15216.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.700e-5
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 0
Query:    3 IKGSSSETASIFCALLRENFVGCVKSTWRGPTYNPVNTELQRRRSSLLLPEFQDGQSSDEETANPHFGRGP 73
            IKGS  E+  IFC L+RENF+GCVK +  GP   P ++       S  LP  ++ +  D E A    GR P
Sbjct: 1417 IKGSWGESCGIFCVLVRENFIGCVKESVHGPRRKPRSSFTLA--VSDRLPGIKEEEKRDPEAAEGIIGRKP 1485          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7050.15216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3P1_ECTSI8.320e-5091.30Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5LAH5_9PHAE4.640e-2158.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC8_9PHAE1.180e-540.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIK9_ECTSI1.700e-540.85Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7050contigE_fasciculatus_S2_contig7050:362..1440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7050.15216.1mRNA_E_fasciculatus_S2_contig7050.15216.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7050 362..1440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7050.15216.1 ID=prot_E_fasciculatus_S2_contig7050.15216.1|Name=mRNA_E_fasciculatus_S2_contig7050.15216.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=93bp
APIKGSSSETASIFCALLRENFVGCVKSTWRGPTYNPVNTELQRRRSSLL
LPEFQDGQSSDEETANPHFGRGPSGPVRPTGPRRHTGRGPTT*
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