prot_E_fasciculatus_S2_contig6972.15112.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6972.15112.1
Unique Nameprot_E_fasciculatus_S2_contig6972.15112.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length702
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A6H5KZI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI4_9PHAE)

HSP 1 Score: 658 bits (1698), Expect = 1.200e-210
Identity = 537/691 (77.71%), Postives = 562/691 (81.33%), Query Frame = 0
Query:    1 MDAPPPATSSTATTTSRATGGTDTDVVDSLSVAVPHAGSLRHDDESSSPLNENGSDAREGAVAGAAS--AAPGGGVA--RSRDCYMAAITACHKEEDFPRALALLKHMRRKGVRGSLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIGHSPQRAVLLLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYRDGAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGM---SIPGRGQEDVAPGVKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAATAPEDARPKAAGAVDAGASLRQETQLGPSERQVEPQQXXXXXXXXXXXXXXXXLTSPGLLEPEASPPSSLSVA----MPAPPSAPSLTTADQAGAGEVPGHEGAERNGGGAAANDRGVLGPSEQEGRWESGEVRPP-AFTIAKPTSTSTRSAVPRELRSAVSEGVRVRNGGNSSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-DGVVAPSRIVMPSGRGVRAAGTRASPESGRPRR 678
            MD  P ATSS AT  +RATG  DTD VDSLS AVPHAGSL   D                         AAPG GVA  RSRDCYMAAI+ACHKEEDFPRALALLKHMRRKGVRGSLGL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIGHSPQRAV+LLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYR+GAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGM   S+PGRG ED  PG+KAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITG+GRGSLHAFQP+IRPEVQRMLTDEFYPPLDSAT+VGNTGRVVVSAKTIEAWLD NVEAKRPVMARLAAALQKKASVAAAA   E+ RP+ AGAVD GAS  QETQ GPS+RQ+EP Q  XXXXXXXXXX    LT PGLLEP+ASP ++ S++     PAPPSAPSLT  DQ G G+VPGHE  ER GGG+AA DRGVLG SEQ   W+SG+ RP  A T  KPT TSTRS VPRE RSAV +G R+RNGG S    XXXXXXXXX           XXXXXXXXXX         X      + DGVVAPSRIVMPSGRGVRAAGTRASPESGRPRR
Sbjct: 1575 MDVAPAATSSAATAATRATGDADTDTVDSLSAAVPHAGSLCDGDXXXXXXXXXXXXXXXXXXXXXXXXXAAPGRGVAVARSRDCYMAAISACHKEEDFPRALALLKHMRRKGVRGSLGLYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIGHSPQRAVVLLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYREGAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGMMGGSVPGRGPEDCVPGLKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGMGRGSLHAFQPIIRPEVQRMLTDEFYPPLDSATEVGNTGRVVVSAKTIEAWLDQNVEAKRPVMARLAAALQKKASVAAAAA--EEPRPEVAGAVDVGASPPQETQFGPSKRQLEPPQQPXXXXXXXXXXEQ--LTHPGLLEPQASPAAAASLSGVMPAPAPPSAPSLTKTDQGGRGDVPGHEAGERGGGGSAAKDRGVLGSSEQVEPWKSGDARPATASTTTKPTPTSTRSTVPREFRSAVRKGDRIRNGGKSXXXXXXXXXXXXXAASGAPGRGGAXXXXXXXXXXREISNKSSSXSSSISGSTDGVVAPSRIVMPSGRGVRAAGTRASPESGRPRR 2261          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: D7G9B6_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B6_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 8.550e-69
Identity = 118/121 (97.52%), Postives = 121/121 (100.00%), Query Frame = 0
Query:  306 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAA 426
            MDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITG+GRGSLHAFQP+IRPEVQRMLTDEFYPPLDSAT+VGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAA
Sbjct:    1 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGMGRGSLHAFQPIIRPEVQRMLTDEFYPPLDSATEVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAA 121          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: D7G9B5_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B5_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 6.420e-34
Identity = 91/113 (80.53%), Postives = 95/113 (84.07%), Query Frame = 0
Query:    1 MDAPPPATSSTATTTSRATGGTDTDVVDSLSVAVPHAGSL--RHDDESSSPLNENGSDAREGAVAGAASAAPGGGVARSRDCYMAAITACHKEEDFPRALALLKHMRRKGVRG 111
            MD  P ATSST TTTSRA GG DT  VDSLS AVPHAGSL    D++SSSP NE+GSDAR G VA AASAAPG GVARSRDCYMAAI+ACHKEEDFPRALALLKHMRRKGVRG
Sbjct: 1440 MDVAPAATSST-TTTSRAIGGADTHTVDSLSAAVPHAGSLCDGDDNDSSSPRNEDGSDAR-GVVAAAASAAPGRGVARSRDCYMAAISACHKEEDFPRALALLKHMRRKGVRG 1550          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A836CDU5_9STRA (Smr domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.440e-24
Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 0
Query:  306 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTA-------LGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQ 417
            MDLHG +LPLAH AVR AL E+ R +     A       L DL +ITG GRGS  A  PV+RPEVQRMLT+EFYPPL S T   N GR+VV A  + AW  HN+  +  +++ + AAL+
Sbjct:    1 MDLHGLTLPLAHCAVRVALRELDRAATAAAAATPGTPLPLPDLVVITGRGRGSDSAVGPVLRPEVQRMLTEEFYPPLGSVTAPANPGRLVVPAADVTAWAVHNLRERSRLISHVGAALR 119          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A7S1BPQ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPQ0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.310e-20
Identity = 74/201 (36.82%), Postives = 98/201 (48.76%), Query Frame = 0
Query:  221 VYNTLVCSFHRDGRYDLADFFYKEAYRDGAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGMSIPGRGQEDVAPGVKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKAS 421
            +Y   V + HR G YD AD    EAYR GA                                 G   ++ GRG+     G +   +DLHG S  +AHAAVR  L  +   ++  G    D+ I+TG G  S    +PV+RPEVQRMLT+EFYPPL + +  GNTG VVV  + +  WL++  E KR  M  LA A ++ AS
Sbjct:   14 LYADAVAALHRAGEYDDAD----EAYRAGAAE------------------------------GGLPSALVGRGE-----GAR---LDLHGMSTAVAHAAVREGLAGLQEHTETRGR---DVLIVTGRGLRSGERLRPVLRPEVQRMLTEEFYPPLSTVSVPGNTGAVVVPGEDVMRWLEYAAEQKRRRMLALADAFREIAS 169          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: I2CPG0_NANGC (Putative udp-glucosyltransferase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPG0_NANGC)

HSP 1 Score: 97.1 bits (240), Expect = 1.730e-18
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 0
Query:  306 MDLHGHSLPLAHAAVRCALVEV----WRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLD 399
            +DLHG S P+A AAVR AL  +    WR       A+ DL +I+GVG+GSL  F+P +RP VQ ML +++YPP+DS TQ GN GRVVV  +++ AWL+
Sbjct:  186 LDLHGMSAPVAAAAVRYALKRIREEWWRCGP---AAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVVGRESLLAWLE 280          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A7S3XTI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTI1_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 5.870e-18
Identity = 48/113 (42.48%), Postives = 77/113 (68.14%), Query Frame = 0
Query:  305 VMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQ 417
            V+DLHG+ LP+AH A+R A+ EV   +Q    ++  + IITG G+ S++  +PV+RPE+Q ML +EF+PP+ ++T+ GN+GR++++  +I  WL H  EAK  +M  L   L+
Sbjct:  426 VIDLHGYVLPVAHMAIRRAMSEVLGVAQHCQQSVKPIEIITGSGKHSINN-KPVLRPEIQNMLVEEFFPPIYTSTKPGNSGRIIITTDSILEWLSHTAEAKNNIMMGLKVVLE 537          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A4D9CXQ2_9STRA (Smr domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXQ2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.630e-17
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 0
Query:  306 MDLHGHSLPLAHAAVRCALVEV----WRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLD 399
            +DLHG S P+A AAVR AL  +    WR       A+ DL +I+GVG+GSL  F+P +RP VQ ML +++YPP+DS TQ GN GRVVV  +++ AWL+
Sbjct: 1050 LDLHGMSAPVAAAAVRYALKRIREEWWRCGP---AAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVVGRESLLAWLE 1144          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A1Z5JGL3_FISSO (Smr domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGL3_FISSO)

HSP 1 Score: 95.5 bits (236), Expect = 1.710e-16
Identity = 51/122 (41.80%), Postives = 78/122 (63.93%), Query Frame = 0
Query:  305 VMDLHGHSLPLAHAAVRCA-----LVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKAS 421
            V+DLHG +LP+AH+AVR A     L ++W  + +   ++ DL I+TG GR S    +P++RP VQRML +EFYPP+ + +  GN G + +S++ I AWL+   + K   M  +A AL+K +S
Sbjct: 1050 VLDLHGMNLPMAHSAVRIAFQQGLLTDIWPNNDK---SVNDLVIVTGRGRNSALKMRPILRPAVQRMLVEEFYPPIGTTSIPGNMGALRISSEDIRAWLEFQRQQKGARMIEVATALKKLSS 1168          
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Match: A0A7S3LDK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDK7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.520e-16
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 0
Query:  306 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTAL--GDLTIITGVG-RGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQ 417
            +DLHG +  +AH+AVRCAL +    +    T L   D+ I+TG G R SLH  +P++RPEVQRML +EFYPPL + +  GN G + VS++ I  W+DH  + K   M  +AA L+
Sbjct:   49 LDLHGMNTAVAHSAVRCALQQEVLGTGWNQTDLWDNDMIIVTGRGKRSSLH-MRPILRPEVQRMLIEEFYPPLSTTSVPGNMGALRVSSEGIYEWVDHQRQQKGVRMLAVAAVLK 162          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZI4_9PHAE1.200e-21077.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9B6_ECTSI8.550e-6997.52Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G9B5_ECTSI6.420e-3480.53PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CDU5_9STRA3.440e-2451.26Smr domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S1BPQ0_9STRA3.310e-2036.82Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
I2CPG0_NANGC1.730e-1851.02Putative udp-glucosyltransferase (Fragment) n=1 Ta... [more]
A0A7S3XTI1_HETAK5.870e-1842.48Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CXQ2_9STRA5.630e-1751.02Smr domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A1Z5JGL3_FISSO1.710e-1641.80Smr domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S3LDK7_9STRA3.520e-1645.22Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..271
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 81..246
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 149..183
e-value: 1.0E-6
score: 26.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 146..194
e-value: 1.5E-10
score: 41.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 116..142
e-value: 1.3
score: 9.4
coord: 80..109
e-value: 0.16
score: 12.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..252
score: 7.432
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 11.246
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 77..111
score: 7.98
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..212
score: 5.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 112..146
score: 8.364
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 81..278
e-value: 1.1E-34
score: 122.2
IPR002625Smr domainPFAMPF01713Smrcoord: 307..390
e-value: 3.9E-8
score: 33.5
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 305..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6972contigE_fasciculatus_S2_contig6972:291..6617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6972.15112.1mRNA_E_fasciculatus_S2_contig6972.15112.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6972 267..7938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6972.15112.1 ID=prot_E_fasciculatus_S2_contig6972.15112.1|Name=mRNA_E_fasciculatus_S2_contig6972.15112.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=702bp
MDAPPPATSSTATTTSRATGGTDTDVVDSLSVAVPHAGSLRHDDESSSPL
NENGSDAREGAVAGAASAAPGGGVARSRDCYMAAITACHKEEDFPRALAL
LKHMRRKGVRGSLGLYNLVLSMCERHGDAETSKKLLTLMRMDRVSPSVVS
CNQVIRACEKAGRWEDALAILMAMVSGGISPNVYTVCSALRACCIGHSPQ
RAVLLLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYRDGA
VSHWQQQQQQQQQQQQQQQRERSPPPPAVPEPDGAGMSIPGRGQEDVAPG
VKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRG
SLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDH
NVEAKRPVMARLAAALQKKASVAAAATAPEDARPKAAGAVDAGASLRQET
QLGPSERQVEPQQQQQQQQQQQQQQQQQQLTSPGLLEPEASPPSSLSVAM
PAPPSAPSLTTADQAGAGEVPGHEGAERNGGGAAANDRGVLGPSEQEGRW
ESGEVRPPAFTIAKPTSTSTRSAVPRELRSAVSEGVRVRNGGNSSSSSSS
RSGSAASGAIGRGVADGGAASSGVSRASSNDSSSGSSSSSSSSSADGVVA
PSRIVMPSGRGVRAAGTRASPESGRPRRRRSMAMAQAEAEAGAAAVEGGE
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036063Smr_dom_sf
IPR002625Smr_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat