mRNA_E_fasciculatus_S2_contig6972.15112.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6972.15112.1
Unique NamemRNA_E_fasciculatus_S2_contig6972.15112.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI4_9PHAE)

HSP 1 Score: 671 bits (1732), Expect = 3.380e-209
Identity = 545/699 (77.97%), Postives = 570/699 (81.55%), Query Frame = 1 
Query:    1 ALQLFATIMDAPPPATSSTATTTSRATGGTDTDVVDSLSVAVPHAGSLRHDDESSSPLNENGSDAREGAVAGAAS--AAPGGGVA--RSRDCYMAAITACHKEEDFPRALALLKHMRRKGVRGSLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIGHSPQRAVLLLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYRDGAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGM---SIPGRGQEDVAPGVKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAATAPEDARPKAAGAVDAGASLRQETQLGPSERQVEPQQXXXXXXXXXXXXXXXXLTSPGLLEPEASPPSSLSVA----MPAPPSAPSLTTADQAGAGEVPGHEGAERNGGGAAANDRGVLGPSEQEGRWESGEVRPP-AFTIAKPTSTSTRSAVPRELRSAVSEGVRVRNGGNSSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-DGVVAPSRIVMPSGRGVRAAGTRASPESGRPRR 2058
            ALQLFATIMD  P ATSS AT  +RATG  DTD VDSLS AVPHAGSL   D                         AAPG GVA  RSRDCYMAAI+ACHKEEDFPRALALLKHMRRKGVRGSLGL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIGHSPQRAV+LLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYR+GAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGM   S+PGRG ED  PG+KAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITG+GRGSLHAFQP+IRPEVQRMLTDEFYPPLDSAT+VGNTGRVVVSAKTIEAWLD NVEAKRPVMARLAAALQKKASVAAAA   E+ RP+ AGAVD GAS  QETQ GPS+RQ+EP Q  XXXXXXXXXX    LT PGLLEP+ASP ++ S++     PAPPSAPSLT  DQ G G+VPGHE  ER GGG+AA DRGVLG SEQ   W+SG+ RP  A T  KPT TSTRS VPRE RSAV +G R+RNGG S    XXXXXXXXX           XXXXXXXXXX         X      + DGVVAPSRIVMPSGRGVRAAGTRASPESGRPRR
Sbjct: 1567 ALQLFATIMDVAPAATSSAATAATRATGDADTDTVDSLSAAVPHAGSLCDGDXXXXXXXXXXXXXXXXXXXXXXXXXAAPGRGVAVARSRDCYMAAISACHKEEDFPRALALLKHMRRKGVRGSLGLYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIGHSPQRAVVLLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYREGAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGMMGGSVPGRGPEDCVPGLKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGMGRGSLHAFQPIIRPEVQRMLTDEFYPPLDSATEVGNTGRVVVSAKTIEAWLDQNVEAKRPVMARLAAALQKKASVAAAAA--EEPRPEVAGAVDVGASPPQETQFGPSKRQLEPPQQPXXXXXXXXXXEQ--LTHPGLLEPQASPAAAASLSGVMPAPAPPSAPSLTKTDQGGRGDVPGHEAGERGGGGSAAKDRGVLGSSEQVEPWKSGDARPATASTTTKPTPTSTRSTVPREFRSAVRKGDRIRNGGKSXXXXXXXXXXXXXAASGAPGRGGAXXXXXXXXXXREISNKSSSXSSSISGSTDGVVAPSRIVMPSGRGVRAAGTRASPESGRPRR 2261
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Smr (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B6_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.040e-66
Identity = 118/121 (97.52%), Postives = 121/121 (100.00%), Query Frame = 1 
Query:  940 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAA 1302
            MDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITG+GRGSLHAFQP+IRPEVQRMLTDEFYPPLDSAT+VGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAA
Sbjct:    1 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGMGRGSLHAFQPIIRPEVQRMLTDEFYPPLDSATEVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKASVAAAA 121
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: PPR_long (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B5_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 4.560e-37
Identity = 99/121 (81.82%), Postives = 103/121 (85.12%), Query Frame = 1 
Query:    1 ALQLFATIMDAPPPATSSTATTTSRATGGTDTDVVDSLSVAVPHAGSL--RHDDESSSPLNENGSDAREGAVAGAASAAPGGGVARSRDCYMAAITACHKEEDFPRALALLKHMRRKGVRG 357
            ALQLFATIMD  P ATSST TTTSRA GG DT  VDSLS AVPHAGSL    D++SSSP NE+GSDAR G VA AASAAPG GVARSRDCYMAAI+ACHKEEDFPRALALLKHMRRKGVRG
Sbjct: 1432 ALQLFATIMDVAPAATSST-TTTSRAIGGADTHTVDSLSAAVPHAGSLCDGDDNDSSSPRNEDGSDAR-GVVAAAASAAPGRGVARSRDCYMAAISACHKEEDFPRALALLKHMRRKGVRG 1550
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Smr (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.910e-24
Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 1 
Query:  940 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTA-------LGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQ 1275
            MDLHG +LPLAH AVR AL E+ R +     A       L DL +ITG GRGS  A  PV+RPEVQRMLT+EFYPPL S T   N GR+VV A  + AW  HN+  +  +++ + AAL+
Sbjct:    1 MDLHGLTLPLAHCAVRVALRELDRAATAAAAATPGTPLPLPDLVVITGRGRGSDSAVGPVLRPEVQRMLTEEFYPPLGSVTAPANPGRLVVPAADVTAWAVHNLRERSRLISHVGAALR 119
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPQ0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.900e-20
Identity = 74/201 (36.82%), Postives = 98/201 (48.76%), Query Frame = 1 
Query:  685 VYNTLVCSFHRDGRYDLADFFYKEAYRDGAVSHWQQXXXXXXXXXXXXXXXXXXXXXAVPEPDGAGMSIPGRGQEDVAPGVKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKAS 1287
            +Y   V + HR G YD AD    EAYR GA                                 G   ++ GRG+     G +   +DLHG S  +AHAAVR  L  +   ++  G    D+ I+TG G  S    +PV+RPEVQRMLT+EFYPPL + +  GNTG VVV  + +  WL++  E KR  M  LA A ++ AS
Sbjct:   14 LYADAVAALHRAGEYDDAD----EAYRAGAAE------------------------------GGLPSALVGRGE-----GAR---LDLHGMSTAVAHAAVREGLAGLQEHTETRGR---DVLIVTGRGLRSGERLRPVLRPEVQRMLTEEFYPPLSTVSVPGNTGAVVVPGEDVMRWLEYAAEQKRRRMLALADAFREIAS 169
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Putative (udp-glucosyltransferase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPG0_NANGC)

HSP 1 Score: 97.1 bits (240), Expect = 3.310e-18
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:  940 MDLHGHSLPLAHAAVRCALVEV----WRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLD 1221
            +DLHG S P+A AAVR AL  +    WR       A+ DL +I+GVG+GSL  F+P +RP VQ ML +++YPP+DS TQ GN GRVVV  +++ AWL+
Sbjct:  186 LDLHGMSAPVAAAAVRYALKRIREEWWRCGP---AAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVVGRESLLAWLE 280
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTI1_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 1.370e-17
Identity = 48/113 (42.48%), Postives = 77/113 (68.14%), Query Frame = 1 
Query:  937 VMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQ 1275
            V+DLHG+ LP+AH A+R A+ EV   +Q    ++  + IITG G+ S++  +PV+RPE+Q ML +EF+PP+ ++T+ GN+GR++++  +I  WL H  EAK  +M  L   L+
Sbjct:  426 VIDLHGYVLPVAHMAIRRAMSEVLGVAQHCQQSVKPIEIITGSGKHSINN-KPVLRPEIQNMLVEEFFPPIYTSTKPGNSGRIIITTDSILEWLSHTAEAKNNIMMGLKVVLE 537
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BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Smr (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXQ2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.450e-16
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:  940 MDLHGHSLPLAHAAVRCALVEV----WRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLD 1221
            +DLHG S P+A AAVR AL  +    WR       A+ DL +I+GVG+GSL  F+P +RP VQ ML +++YPP+DS TQ GN GRVVV  +++ AWL+
Sbjct: 1050 LDLHGMSAPVAAAAVRYALKRIREEWWRCGP---AAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVVGRESLLAWLE 1144
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Smr (domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGL3_FISSO)

HSP 1 Score: 95.5 bits (236), Expect = 4.330e-16
Identity = 51/122 (41.80%), Postives = 78/122 (63.93%), Query Frame = 1 
Query:  937 VMDLHGHSLPLAHAAVRCA-----LVEVWRFSQREGTALGDLTIITGVGRGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQKKAS 1287
            V+DLHG +LP+AH+AVR A     L ++W  + +   ++ DL I+TG GR S    +P++RP VQRML +EFYPP+ + +  GN G + +S++ I AWL+   + K   M  +A AL+K +S
Sbjct: 1050 VLDLHGMNLPMAHSAVRIAFQQGLLTDIWPNNDK---SVNDLVIVTGRGRNSALKMRPILRPAVQRMLVEEFYPPIGTTSIPGNMGALRISSEDIRAWLEFQRQQKGARMIEVATALKKLSS 1168
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDK7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.220e-16
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1 
Query:  940 MDLHGHSLPLAHAAVRCALVEVWRFSQREGTAL--GDLTIITGVG-RGSLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDHNVEAKRPVMARLAAALQ 1275
            +DLHG +  +AH+AVRCAL +    +    T L   D+ I+TG G R SLH  +P++RPEVQRML +EFYPPL + +  GN G + VS++ I  W+DH  + K   M  +AA L+
Sbjct:   49 LDLHGMNTAVAHSAVRCALQQEVLGTGWNQTDLWDNDMIIVTGRGKRSSLH-MRPILRPEVQRMLIEEFYPPLSTTSVPGNMGALRVSSEGIYEWVDHQRQQKGVRMLAVAAVLK 162
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6972.15112.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.380e-20977.97protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Smr1.040e-6697.52domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PPR_long4.560e-3781.82domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Smr5.910e-2451.26domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Hypothetical5.900e-2036.82protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Putative3.310e-1851.02udp-glucosyltransferase (Fragment) n=1 Tax=Nannoch... [more]
Hypothetical1.370e-1742.48protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Smr1.450e-1651.02domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Smr4.330e-1641.80domain-containing protein n=1 Tax=Fistulifera sola... [more]
Hypothetical6.220e-1645.22protein (Fragment) n=1 Tax=Amphora coffeiformis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6972contigE_fasciculatus_S2_contig6972:267..7938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score234.2
Seed ortholog evalue1.9e-58
Seed eggNOG ortholog2880.D7G9B6
Model size3451
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.Smr domain
EggNOG OGs2E0BI@1,2S7SI@2759
Cds size2106
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6972.15112.1prot_E_fasciculatus_S2_contig6972.15112.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6972 291..6617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842354.7396152-UTR-E_fasciculatus_S2_contig6972:266..2901696842354.7396152-UTR-E_fasciculatus_S2_contig6972:266..290Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig6972 267..290 +
1696842354.848213-UTR-E_fasciculatus_S2_contig6972:6617..79381696842354.848213-UTR-E_fasciculatus_S2_contig6972:6617..7938Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig6972 6618..7938 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842354.7527616-CDS-E_fasciculatus_S2_contig6972:290..4011696842354.7527616-CDS-E_fasciculatus_S2_contig6972:290..401Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 291..401 +
1696842354.7632258-CDS-E_fasciculatus_S2_contig6972:1639..18491696842354.7632258-CDS-E_fasciculatus_S2_contig6972:1639..1849Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 1640..1849 +
1696842354.7737765-CDS-E_fasciculatus_S2_contig6972:2092..22541696842354.7737765-CDS-E_fasciculatus_S2_contig6972:2092..2254Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 2093..2254 +
1696842354.787245-CDS-E_fasciculatus_S2_contig6972:3069..31881696842354.787245-CDS-E_fasciculatus_S2_contig6972:3069..3188Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 3070..3188 +
1696842354.7978988-CDS-E_fasciculatus_S2_contig6972:3865..39551696842354.7978988-CDS-E_fasciculatus_S2_contig6972:3865..3955Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 3866..3955 +
1696842354.8072853-CDS-E_fasciculatus_S2_contig6972:4293..45631696842354.8072853-CDS-E_fasciculatus_S2_contig6972:4293..4563Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 4294..4563 +
1696842354.8164382-CDS-E_fasciculatus_S2_contig6972:4875..49871696842354.8164382-CDS-E_fasciculatus_S2_contig6972:4875..4987Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 4876..4987 +
1696842354.825258-CDS-E_fasciculatus_S2_contig6972:5260..53261696842354.825258-CDS-E_fasciculatus_S2_contig6972:5260..5326Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 5261..5326 +
1696842354.8341784-CDS-E_fasciculatus_S2_contig6972:5651..66171696842354.8341784-CDS-E_fasciculatus_S2_contig6972:5651..6617Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6972 5652..6617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6972.15112.1

>prot_E_fasciculatus_S2_contig6972.15112.1 ID=prot_E_fasciculatus_S2_contig6972.15112.1|Name=mRNA_E_fasciculatus_S2_contig6972.15112.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=702bp
MDAPPPATSSTATTTSRATGGTDTDVVDSLSVAVPHAGSLRHDDESSSPL
NENGSDAREGAVAGAASAAPGGGVARSRDCYMAAITACHKEEDFPRALAL
LKHMRRKGVRGSLGLYNLVLSMCERHGDAETSKKLLTLMRMDRVSPSVVS
CNQVIRACEKAGRWEDALAILMAMVSGGISPNVYTVCSALRACCIGHSPQ
RAVLLLKELRGIMGTALGLPVYNTLVCSFHRDGRYDLADFFYKEAYRDGA
VSHWQQQQQQQQQQQQQQQRERSPPPPAVPEPDGAGMSIPGRGQEDVAPG
VKAGVMDLHGHSLPLAHAAVRCALVEVWRFSQREGTALGDLTIITGVGRG
SLHAFQPVIRPEVQRMLTDEFYPPLDSATQVGNTGRVVVSAKTIEAWLDH
NVEAKRPVMARLAAALQKKASVAAAATAPEDARPKAAGAVDAGASLRQET
QLGPSERQVEPQQQQQQQQQQQQQQQQQQLTSPGLLEPEASPPSSLSVAM
PAPPSAPSLTTADQAGAGEVPGHEGAERNGGGAAANDRGVLGPSEQEGRW
ESGEVRPPAFTIAKPTSTSTRSAVPRELRSAVSEGVRVRNGGNSSSSSSS
RSGSAASGAIGRGVADGGAASSGVSRASSNDSSSGSSSSSSSSSADGVVA
PSRIVMPSGRGVRAAGTRASPESGRPRRRRSMAMAQAEAEAGAAAVEGGE
G*
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mRNA from alignment at E_fasciculatus_S2_contig6972:267..7938+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig6972.15112.1 ID=mRNA_E_fasciculatus_S2_contig6972.15112.1|Name=mRNA_E_fasciculatus_S2_contig6972.15112.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7672bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6972:267..7938+ (Ectocarpus fasciculatus EfasUO2)
GCCTTGCAGCTGTTCGCGACGATCATGGACGCTCCTCCCCCAGCAACTAG
CTCCACCGCCACCACCACCAGCCGCGCTACCGGTGGCACGGACACCGATG
TCGTTGACAGTCTCTCGGTCGCTGTTCCTCATGCGGTGAGAAAAAAATCC
GTGTTTAGTTTTAGAATCATTCGTTTTGTTGTACGGCTTTTTTTTGTAGT
TTTAGCACAGCCATCGTGTCAGAACACCAGAACCAAACTACATTCGGCTA
CACAAACTGCAAGAGAAATAATTATATTTTCCGGGCAAGTGCACGCAAAA
AGTTATATCATTTGGTGTTTTTGGCAGACATTTTTGTTGTCCACTTCTGC
CGTTGGATCCATTACCGTTGAGAATTGGATTGCCCCTGTGGGTTTGTCCT
CCTTTGCTTTTGTTGGCATTCCTCTCGCGTAGCTTGTCGTGACAACGCTG
CGGTGTGGGTGGCACGTTCAGCATGGAATGTAAACCTATTAGTAGCCACC
ATCGAAGAAAGGGCCGCTTGTTTTCTTGCTTGCATGGGTGGATGAGACTC
GCAACCATATCCATACCGAACCGATGCATGCACCGCGGTGAAATTATGTG
CGCTGTTTTTCGCAACCATACCGTTGCATGCACCACCGAGAATTCATGTG
CGCTGTTTTAGCTCGCGTACACACAGAGAGGATGTAGATACCTTTGAGTG
GCTTAGCCTTGAGTGGCTTAGCCCTTAGCCTTCAGTGGCTTAGCCCTTAG
CCTTGAGTGGCTTAGCCCTTAGCCGTCAAGCTGTTGATCGATCGTCTCGT
CCCGTACGTTACATAGTTTGCCGCATGCCAAGAACAGCGGTTATTCATGG
TTGCTGATCCGCCGAATGTGTATCTTAGTCGTCCTATTCCTATTTTACTG
CTTTCGGTTGCTCTTTGTCTTGGCATAGGTCATCCACCAAGCCGAACATA
CCCCCAAACCCACCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTCAATTCA
AAATCAATATAAACAAAATGATACATTTCNNNNNNNNNNTTCCACCTAAT
GTTTTTTTTTTCTGCCTTTTCCCTTTTTTTTTTTTTTCTGTTTCCCTTTT
TTTTTGACAAGGCCCCCCCCCCAGCCGCCCCCCCCCCCCCCCCCCCCCTT
TTCTTTTTATTGCGTGTCCTTTGCCCACGGAAGGCGTTGTCGTCAGTCGG
ACCGGTGCAGATATTATTATAGAAGGTACCAAGCAGAGACCGAAAAACGA
TTCTTAATCTGAAAACAACGACGCTGGGCAACCACCATGGCTCGCCTTGG
CTGGCTGTGTTGTTTCTCGAGCCGACCCCGGATTGCTGCATGGGTGTTTC
ATCCCGCGGTCCTACTGTTACAGGGGTCCTTGCGCCACGACGATGAAAGC
AGTAGCCCTCTCAACGAAAACGGATCTGACGCGAGAGAGGGGGCGGTGGC
GGGTGCGGCGTCCGCTGCGCCGGGCGGGGGGGTGGCGAGGAGCCGCGACT
GCTACATGGCCGCGATAACGGCGTGCCACAAGGAAGAGGACTTCCCGCGC
GCCCTCGCGCTGCTCAAGCACATGCGGCGGAAGGTGCGCTGTGTTGTCGT
CGTTGTTATTCAGGCTTGAATGAGGTTTATGTTTTGACTATTATAATAGT
GTTCGAGGCGGAGGTCTTCCCTTCCCTCGTCTACACGTGAGTTGCGGCTG
CTTGTGTAACATCCGCACCAACGTTCGTTGGCATTCTGTTGCGTTTTTCG
CTGTTGCTTCTCTTTCCCCTTTTACATGTATTTTGTGGTGGTGGTGGTGG
TGGTGCTGCTGCTGCTGTTACTGCAGGGGGTCAGGGGGAGCCTGGGTCTC
TACAACCTGGTGCTGAGCATGTGCGAGAGGCACGGGGACGCGGAAACTTC
AAAGAAGCTTCTGACCCTCATGCGGATGGACCGCGTGTCACCCTCGGTCG
TGTCCTGCAACCAGGTCATCCGGGCCTGCGAGAAAGCGGTGAGCTTGCCT
TCCAAGTAGGGCAGAACAGGCAGAACGCGAATGAGCCAGCCCATGGTCGA
CATCTCACGGTTGATGGTGGATTTTAGTAGACCTGTCCCGAGCTTTTGCA
GGACACAGCGAGTGCTTCTCCCCCTCGTGTGGTCGTTTCAAGGCAAACGA
GATGATGAAGGGAAGTTAGGTTTGGCGGACGAACTCGAAGTGAAAGTTAG
CCCGATGGTCGTCCGTATTATTTTACACATGTGTGTTTTAGCCCAATGAT
CGTGCTCCCCGCCTCTCTCTCGGCCTACCTTGCCCTAAGAAAGGTAGTGT
GTGTCGTTGTATTTTGTTTTCGGTAAGTCGTTTCGCGCAGTCGATGCTGC
ATCTATTTAGTAGCGATGCTGTATCGGAAGCAAGCAATAGTCTTCGAGAG
TGATTTGCCTCAATTTGTGCTATCAATGATACCAAGGGATCCCCAGGTTC
CTTCCTTCAAGCGGCCTCATGACGAACAGCACACCGCCGTGGCTAGCGGT
ACCGCCTGCTTGCGCGAAACTCACAACTAACCAACGGGCGGGACTTGCCC
GCCACCTCCGCCTCCTTCCCCCGGCGCAATTGCTGCCAACGGGTCTATCC
AACTCCACCGATATGTCCTCTCTCAACCTCAACCTCAACGGGGCTACCCG
CCACCACCGATACAACCTCTCTCTCTCCTCTCCCCCAAAGCATTCGGTGC
CATCCGTGCCGTATCCGACGACACTGTTACAACGACAACGTCTCTATCCC
CCACCGCAATGGCTGTCTAATCGGGCATCATCCCTTTCACTTTCACCTTT
CAGGGCCGGTGGGAGGACGCTCTGGCCATCCTGATGGCCATGGTCTCGGG
AGGCATCTCCCCTAACGTGTACACCGTGTGCTCCGCGCTCAGAGCTTGCT
GCATCGGACACTCGCCACAGAGGTAACAACCTTATAGAACATTTTATTGG
TTGAGAGTATTTTTTTTTATTTGTCGAGAACAGTTTTCTATTCAAGAACT
TATTTATTTTTTCTGGGGATATGCTCATGTAAACGACTGCCGTGGTCACT
AGACCGTTGACGTCGCATCCTTACAACGCCGCACGGAGCACGCTGGGTTC
TCACAGGATCAAGTGCGAAGCGCCGTGGGGTATTCCAGGGGTTATTCTCA
TGCCGTAAATAGTCACTAGACCATTGACCTCGCATCGCCGGGACGGAGCG
ATATGGGAATATTCAACTTTGCTGATGCCGTTCGGGGGCGTGTTTTTCTA
CCCCGTGTATGGAAAATCCGATTTTTTTTTTTCTTCTTTCCTTTTCTGCG
ACCCGTATTTTCGTAAGATGTAAGATGGCTGCTGCGCTGGACCGGCGACA
CGAGTGGTGATACGTTGGCGCCGCTGATGAGGATTTCGTTGTTCTTGTTT
GATTGCTTAGGGTTTTGACTCTTGACCACCCATTCTCTCGCTCTCTCTAT
TTTCAGTCTGTTTCACTCTGTGTCTCACTCTTTCTCTTTCATTCTCTCTC
GCGCTCTCTCCCTCTCCCTGTCGTTTCTATCTTCGAAACATCTGTCGTTT
CTATGTTCGGAACGTCTGCCTTGTCTTCGTCGGCACATTCACTTCACAGG
GCTGTGCTTCTTCTGAAGGAGCTCCGTGGAATCATGGGCACCGCGCTCGG
TCTCCCCGTGTACAACACTCTAGTCTGCTCTTTTCATAGGTGACACAGGT
TTTATCGCACAACTCGACAAAAATGCTCGTCGATGTTGTAGCTGTTGTGT
TGCTGTGGCTTTGGTCGTGGTTATGGTCGTCGTCGTCGTCGTTGTTGTTG
CTATCTTCATGCTGTTGCCCACCATAGTACCTGGTCTGCCGTAGATACCT
ACCAAGGCACTTTTTCTTCGCCGAAGGTTGTGCCCCAAACTGCAAAATGC
TACAATCTGAAAAAGAAAAGTTTCAGCAGTGTTTGCGCCGTGTGTTGTTG
TTGTTGTTGTCGTTGCCGTGTCTGTCTCTCTTTTACCACATTGTTTTGCT
GTTTTTTTTTCTTTATTTTTCCACAAGGGATGGACGCTACGATCTCGCGG
ATTTCTTCTACAAGGAGGCCTACCGGGATGGAGCCGTATCTCACTGGCAG
CAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAACAACAACGGGAACG
ATCTCCTCCACCGCCGGCAGTACCGGAGCCTGATGGGGCGGGGATGAGCA
TCCCCGGGAGGGGACAGGAGGATGTTGCCCCCGGGGTGAAGGCTGGGGTG
ATGGACCTCCACGGACACAGCTTGCCGCTAGCCCACGCCGCCGTCAGGTA
TTTTGTTTTCGTTTCGTCTGCGCACGCACTGGATGATACTGTAGGAGGAA
ACCGTCCGCCTTGTTGTCTATTTCGTGTTGTTTGTTTTTTGTCGGAGGTT
TATTTTTCGAAGTGCAGCCGTGAGGCTGCTGACGTCGTTCAGTCGGGTAG
CACGGTCGATGCTAGTAGCGCAAAAACCACACACGCACGCCTCCACACCA
ATGCTATAATAGGCAAACGTTGATATCGACCCTCGTCCGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATCTGTCTGTCTGTGCGC
CCTTTACAGGTGCGCTCTGGTTGAGGTGTGGCGGTTCTCTCAGAGAGAGG
GGACAGCGTTGGGCGACCTGACCATCATCACCGGCGTGGGGCGGGGGAGC
CTCCACGCCTTCCAGCCAGTCGTGAGTCTCGTGTGCGGTTGTTTTGATTG
TAGTTCCACCCGTACGCGAGCCACATGTTCTGCGTCGACCCCTTCCAGCC
GAGTAGGGCGAGTATTTGCCATTGACTCCTGGCCCTAGTTCCTCAGCTTG
TCGTGACTCTTCTTCCTTCATCGCTTCCGCTGTCGTCGCCAACCCGCGAT
GTTTACCCGCCTAGACTGACTACGTTCTTCCTCTGCGGTCGAGCCAACTC
TCCCATCCCGCCCGAACGTGCGTGTTGTGGTGCGTGTTCCACAGATTCGG
CCGGAGGTTCAGCGAATGCTCACGGACGAGTTCTACCCCCCCCTAGACTC
AGCCACACAGGTAGCTACGCGTGTGTCTGGACGATGTGTCCAGCCGAGTT
GTTGTTTTTGTTGCTGTTGCCGCTGTTGTTGGTGATGATGATGATGATGA
TGTTATTGTTGCTATTGTTGCTGGCGACCTCGTTGTTGACTCTTGCGAGC
TGGATGGTGAATTCATGACTCTGTCACTTCCGGGCCATGCATGCCCCATG
CAGCAGAAGCAGGTTTCTCGATGTTGCACGCCTCACGACCCGTACTTGAT
CAAGACGATTCGTACATATGTCCACCACATCTGTTCTCTCTCAAAGCAAT
GAGCATGTAGTTCCGCTCTTGCTTCCGTATCACAGGTTGGAAACACGGGA
CGCGTGGTGGTCTCGGCCAAGACAATCGAGGCCTGGCTAGACCACAACGT
AGAGGCAAAGCGGCCGGTCATGGCGAGGCTTGCGGCCGCTCTCCAGAAGA
AGGCTTCGGTTGCGGCAGCGGCAACGGCGCCGGAGGACGCAAGGCCCAAA
GCAGCGGGTGCCGTGGATGCGGGCGCGTCGCTACGGCAGGAGACGCAGTT
GGGACCGTCGGAGCGCCAGGTGGAACCGCAACAACAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGACTTCTCCGGGTTTG
TTAGAGCCGGAGGCTTCGCCGCCGTCTTCGTTGTCGGTAGCGATGCCAGC
ACCCCCATCGGCACCGTCGTTGACGACGGCGGATCAAGCTGGCGCTGGCG
AAGTGCCCGGTCACGAGGGGGCGGAGAGGAACGGAGGAGGTGCGGCGGCG
AATGATCGGGGTGTTCTAGGCCCCTCGGAGCAAGAGGGGCGATGGGAATC
CGGGGAAGTGAGGCCGCCGGCATTCACCATAGCGAAGCCTACGTCGACTT
CTACCAGATCCGCGGTCCCGAGAGAACTCCGATCGGCCGTGTCCGAGGGC
GTTAGGGTTCGCAACGGTGGTAATAGCAGCAGCAGCAGCAGCAGCAGGAG
CGGTAGCGCCGCCAGCGGGGCTATAGGCCGTGGTGTTGCCGACGGTGGTG
CTGCCAGCAGTGGGGTAAGCAGAGCAAGCAGCAACGACAGCAGCAGCGGT
AGCAGCAGCAGCAGCAGCAGCAGCAGCGCAGATGGCGTTGTCGCCCCGAG
CAGGATAGTCATGCCGTCCGGCCGTGGCGTACGTGCGGCGGGTACGCGCG
CTTCTCCCGAGAGCGGACGGCCGCGGAGAAGAAGGAGCATGGCAATGGCA
CAAGCCGAAGCCGAAGCCGGCGCTGCTGCTGTGGAAGGGGGGGAAGGGTA
GTTAAAACCCTAGGTGGGAGAACGCTAGCAGCAGCCGGGGTAGTGCGCTC
AGGTTTCCGCTCTCTCGTCAAGATGACAGTCGCCGGGTTCTGATTGGCCG
ACAGTCGTTGGCCGGTGGGTGGAGTCGAAAAAAGTCGGGAAGGCCACGGC
GTGCTGGCGTCATTGCTTTTCGTACTCCATGGCGTTGTGCACGTGCGCGG
TGGTGCGTGTTGTATTGTTGCCTCTTTGCTGGTGCTGTTCTCGGTTGATT
GCGAAAGCCTGTAGGTCAGAGTCGCTTCCTCCTGTCTATTATTGCGTTAC
GTTTGTACTCCGTGGGTGTGTGACGTTTGCGTGTCATTCGCTGCCCTGCT
ACTATTTATTCGTTTCGTCGAGAGTTCCGTCAACTGTTTTTGTGTCCGGG
GAGTGCGCCGCATCGGTAAAGTGACCCGATCGTAGGGTCCATCCAGAAGG
GTCAATTATGAATCGAGAGCAGCAGTCAGAGCAACAGTTATCGCGATGCC
GGAGGCAATAACGCCCGTCCCCCGATGTATGATCACGCGTCTCTTTGGTC
GTTGCATTCGAATACTGGATTACTTTTGGTCGTACCCCCCCCCGGAGAGA
AGAGTGTTGTGCAGCCCCTCGTTCGCTTGTCATGTGCGGATAACTGGGGT
GTACATAAGGGACCCTGCTCAACATTTTCTCCTCTTTGACGATCCTGTTT
TTATTCTGGGTATTTCGTGTTTCAAGTTGCATGACGGGGTATGTTTGTAA
GGGTGGCGAAGCGAAGTATTTGGGTCAGTGGGGTATCAGCCTCCTCGAGA
GTGAGTGACTTGGGGCAGCGCGAGGGCATCTAGGTTGGTAAAACGTGTGA
GGAGTGAGGAGGTGTGAATCGGTGGTTGGCATTGTGTTTCGTGAAGTCGT
TGATCCGGGGGGAGGTGTCATTTCGTCCATTCCCTGCGCAGCACTTGACC
TTGGGTTCCCTCCTGGTTGGAGCAGCGCGGCGTAACCGTGCGTCCGAATA
CCGGGTTCCGATGTATAATAATACCGCGGGGGGCAAAAGCAACATCACCA
ATAATCTCACGTGGCAATGTCCAGGTGTTCCGATGGTCGTGCAATGTTCT
GGCCAAGGAGTGCTTCTCTGCGCAATTTCGCTCGTGTCTCGAGGAAGTGC
GATTTAGTCTGCGTGGTTCTGTCGCCGTCTGGTTGGGTGTTGAGTGCCCA
GATGAGACGAGAAACCTGGCGCATGGAATCGCTTGTTCTCCCGGGATTCA
AGGCTAGCGAACCAGGCGAAGACATTTTTTGTACGGGAACCGGTCAACGG
CGAATGGCATTTTTGTGTTTTT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6972:267..7938+

>mRNA_E_fasciculatus_S2_contig6972.15112.1 ID=mRNA_E_fasciculatus_S2_contig6972.15112.1|Name=mRNA_E_fasciculatus_S2_contig6972.15112.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2106bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6972:267..7938+ (Ectocarpus fasciculatus EfasUO2)
ATGGACGCTCCTCCCCCAGCAACTAGCTCCACCGCCACCACCACCAGCCG
CGCTACCGGTGGCACGGACACCGATGTCGTTGACAGTCTCTCGGTCGCTG
TTCCTCATGCGGGGTCCTTGCGCCACGACGATGAAAGCAGTAGCCCTCTC
AACGAAAACGGATCTGACGCGAGAGAGGGGGCGGTGGCGGGTGCGGCGTC
CGCTGCGCCGGGCGGGGGGGTGGCGAGGAGCCGCGACTGCTACATGGCCG
CGATAACGGCGTGCCACAAGGAAGAGGACTTCCCGCGCGCCCTCGCGCTG
CTCAAGCACATGCGGCGGAAGGGGGTCAGGGGGAGCCTGGGTCTCTACAA
CCTGGTGCTGAGCATGTGCGAGAGGCACGGGGACGCGGAAACTTCAAAGA
AGCTTCTGACCCTCATGCGGATGGACCGCGTGTCACCCTCGGTCGTGTCC
TGCAACCAGGTCATCCGGGCCTGCGAGAAAGCGGGCCGGTGGGAGGACGC
TCTGGCCATCCTGATGGCCATGGTCTCGGGAGGCATCTCCCCTAACGTGT
ACACCGTGTGCTCCGCGCTCAGAGCTTGCTGCATCGGACACTCGCCACAG
AGGGCTGTGCTTCTTCTGAAGGAGCTCCGTGGAATCATGGGCACCGCGCT
CGGTCTCCCCGTGTACAACACTCTAGTCTGCTCTTTTCATAGGGATGGAC
GCTACGATCTCGCGGATTTCTTCTACAAGGAGGCCTACCGGGATGGAGCC
GTATCTCACTGGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCA
ACAACAACGGGAACGATCTCCTCCACCGCCGGCAGTACCGGAGCCTGATG
GGGCGGGGATGAGCATCCCCGGGAGGGGACAGGAGGATGTTGCCCCCGGG
GTGAAGGCTGGGGTGATGGACCTCCACGGACACAGCTTGCCGCTAGCCCA
CGCCGCCGTCAGGTGCGCTCTGGTTGAGGTGTGGCGGTTCTCTCAGAGAG
AGGGGACAGCGTTGGGCGACCTGACCATCATCACCGGCGTGGGGCGGGGG
AGCCTCCACGCCTTCCAGCCAGTCATTCGGCCGGAGGTTCAGCGAATGCT
CACGGACGAGTTCTACCCCCCCCTAGACTCAGCCACACAGGTTGGAAACA
CGGGACGCGTGGTGGTCTCGGCCAAGACAATCGAGGCCTGGCTAGACCAC
AACGTAGAGGCAAAGCGGCCGGTCATGGCGAGGCTTGCGGCCGCTCTCCA
GAAGAAGGCTTCGGTTGCGGCAGCGGCAACGGCGCCGGAGGACGCAAGGC
CCAAAGCAGCGGGTGCCGTGGATGCGGGCGCGTCGCTACGGCAGGAGACG
CAGTTGGGACCGTCGGAGCGCCAGGTGGAACCGCAACAACAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGACTTCTCCGG
GTTTGTTAGAGCCGGAGGCTTCGCCGCCGTCTTCGTTGTCGGTAGCGATG
CCAGCACCCCCATCGGCACCGTCGTTGACGACGGCGGATCAAGCTGGCGC
TGGCGAAGTGCCCGGTCACGAGGGGGCGGAGAGGAACGGAGGAGGTGCGG
CGGCGAATGATCGGGGTGTTCTAGGCCCCTCGGAGCAAGAGGGGCGATGG
GAATCCGGGGAAGTGAGGCCGCCGGCATTCACCATAGCGAAGCCTACGTC
GACTTCTACCAGATCCGCGGTCCCGAGAGAACTCCGATCGGCCGTGTCCG
AGGGCGTTAGGGTTCGCAACGGTGGTAATAGCAGCAGCAGCAGCAGCAGC
AGGAGCGGTAGCGCCGCCAGCGGGGCTATAGGCCGTGGTGTTGCCGACGG
TGGTGCTGCCAGCAGTGGGGTAAGCAGAGCAAGCAGCAACGACAGCAGCA
GCGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCGCAGATGGCGTTGTCGCC
CCGAGCAGGATAGTCATGCCGTCCGGCCGTGGCGTACGTGCGGCGGGTAC
GCGCGCTTCTCCCGAGAGCGGACGGCCGCGGAGAAGAAGGAGCATGGCAA
TGGCACAAGCCGAAGCCGAAGCCGGCGCTGCTGCTGTGGAAGGGGGGGAA
GGGTAG
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