prot_E_fasciculatus_S2_contig685.14980.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig685.14980.1
Unique Nameprot_E_fasciculatus_S2_contig685.14980.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length566
Homology
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: D8LGX6_ECTSI (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX6_ECTSI)

HSP 1 Score: 861 bits (2225), Expect = 3.100e-312
Identity = 478/505 (94.65%), Postives = 485/505 (96.04%), Query Frame = 0
Query:   61 MMTSHQHDAITIHSSSAAVTGLAERCSAETTYQGEHRVVHIATPGAPPPWLEDEEQGEEQQATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRDVVGRVHRGLRTDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL 565
            MMT HQHDAITI SSSAAVTG+AE CSAETTYQGEHRVVHIATPGAPPPWLEDEEQGEEQ+ATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQV DWS+RIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRAR+VKKRYLALLTPGP VPTGSMAHCCRSKAFDGSRRPRIYADFD ELLA DKWGGAWQEARSTVLLCAPATG A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PEE+EAAA+GGEGR E+DGSTAPDAEAT AA AAREEGDH PHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYR VVGRVHRGLR DDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL
Sbjct:    1 MMTYHQHDAITIASSSAAVTGIAEGCSAETTYQGEHRVVHIATPGAPPPWLEDEEQGEEQRATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVMDWSKRIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPAVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEIEAAARGGEGREEEDGSTAPDAEATTAAEAAREEGDHAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL 505          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A835YKX4_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX4_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.150e-55
Identity = 127/354 (35.88%), Postives = 163/354 (46.05%), Query Frame = 0
Query:  211 GAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRDVVGRVHRGLRTDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWA 564
            G YLR+H  PR F  +   DW  R++H   D+VV+DKPAGVP+VPT DN   + +++A  A+ G          PLHAVSRLDVCTSG++VFAR   AA  L+    AR V+K Y  ++T G  VP G + HCC ++A  G  +PRIYA FD      D  G  W+ A   VL                                                                      D GS A                        + L TGRTHQ+RLQLAA+G+ IVGD+RY D++G+VH G    D T  FG EPE I L AA +EF+W G  V ++ + P WA
Sbjct:  150 GTYLRLHAAPRRFARAAAADWRARVLHACADYVVIDKPAGVPSVPTTDNAADSALWRARAALGG------DAARPLHAVSRLDVCTSGVLVFARSPAAAAALSGAISARAVRKVY-RVVTTGAEVPLGVLRHCCSTRARTGDAQPRIYAPFDAAKACGD--GSGWRLAELEVL--------------------------------------------------------------------SHDRGSGAS----------------------TISLMTGRTHQIRLQLAALGAGIVGDSRYADIIGKVHDGTAASDRTDWFGPEPEEIRLHAAALEFDWGGERVCYTAE-PPWA 403          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A5J4Z0G8_PORPP (RNA pseudouridine synthase 6, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0G8_PORPP)

HSP 1 Score: 162 bits (410), Expect = 1.490e-40
Identity = 124/359 (34.54%), Postives = 159/359 (44.29%), Query Frame = 0
Query:  211 GAYLRVHCDPRTFPASQVTDWSERIVHKNE-DFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPT------GSMAHCCRSKAFDGSRRPRIYA------DFDRELLASDKW---------GGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRDVVGRVHRGLRTDDDTSRFGQEPEAIALQAARIEF 547
            G Y R+H +P  +P +    W +RIV+  + DFV VDKP  +P+VPT+ N V+    Q   A+          P PLHAVSRLDVCTSG++VFARHK AA  LNE  R R VKKRY  LL PGP +P       G + H  R+   D   +PRIY       D D  LL  + +         GGAW  A   +L                                                     +  EM  A                    TM A  A  +  +  +   +EL TGRTHQLRLQ A++G  + GD+RYR V GRVHRG+  DD+   FG EP  ++L A+   F
Sbjct:  141 GMYFRLHANPARYPDAHAYVWKDRIVYNGDNDFVAVDKPPNLPSVPTLVNVVECARTQVECAL--------ECPAPLHAVSRLDVCTSGVLVFARHKRAAAHLNEQIRNRSVKKRY-TLLVPGP-IPREIIQKDGRVLHAARTNLPDNIPKPRIYRLLDLEKDLDAALLQDESYSTPLEAPKIGGAWHVAAMRIL-----------------------------------------------------TEREMNRAELS--------------EVVTMQADHAGIDVRYTEY--EVELLTGRTHQLRLQFASLGLPLFGDSRYRPVSGRVHRGVPEDDNLDMFGPEPNRVSLCASVFHF 420          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: D7G898_ECTSI (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G898_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.810e-33
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 0
Query:  264 CVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRS 346
            C  QASLAVAG+ PGSRSLPPPLHAVSRLDVCTSG+VVFARHK+A KQLNELFRAR+VKKRYLALLTPGPPV TGSM    R+
Sbjct:   71 CFQQASLAVAGISPGSRSLPPPLHAVSRLDVCTSGVVVFARHKDATKQLNELFRARRVKKRYLALLTPGPPVSTGSMVRWRRA 153          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A8J9RE80_9CHLO (Probable mitochondrial RNA pseudouridine synthase Rpusd4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RE80_9CHLO)

HSP 1 Score: 106 bits (264), Expect = 8.180e-21
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 0
Query:  212 AYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAH 342
            AY+RVH  P+ FP +   DW  RIVH  +DFVV++KPAGVP VPT+DN +++C+   + A+     G  S   PL +  RLD CT G+VV  R ++     NEL R     +++   LT  PP PTG+  H
Sbjct:  127 AYVRVHVHPKRFPNAYKVDWKARIVHAAQDFVVINKPAGVPVVPTVDNILESCLACTAQAL-----GESS---PLLSTHRLDTCTEGLVVLGRKRDFVAAFNELLRLPGAVQKFYRALTKSPP-PTGASVH 248          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A2P6Q2U7_ROSCH (Putative diaminohydroxyphosphoribosylaminopyrimidine deaminase, tRNA pseudouridine(32) synthase n=3 Tax=Rosoideae TaxID=171638 RepID=A0A2P6Q2U7_ROSCH)

HSP 1 Score: 105 bits (262), Expect = 1.600e-20
Identity = 122/448 (27.23%), Postives = 168/448 (37.50%), Query Frame = 0
Query:  141 ELVKFGSVYIGEVVDTNWRHPPS---KEKQMTIAAARKKALKSADQAPFRG-TSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRY--------------------RDVVGRVHRGLRTDDDTSRFGQEPE-AIALQAARIEFEWQGRTVVFSTDRPSW 563
            +L+ FG+VY   V     + PP+   +E ++   A     LK   +A  +G T  E  +  R+       F   G YLRVH  P+ FP     DW  R++  NEDFVV+DKPAG     T DN  ++C    S A+         L  PL    ++D CT G VV AR KE     +   R +QVKK YLAL     PVP G++ H  R         PR+ ++   E          W   +  V+ C     P S                                             EE           VED G  + D                  + C + L TG+THQ+R QLAA G+ +VGD+ Y                    +  +G   + +   +  +R G+EP  AI LQA +I   W      F    P W
Sbjct:  121 DLIHFGAVYYALVCP---KPPPTATPEEMKVYKEATAPSVLKK--RASIKGKTVREAQKTFRI--THVDQFVEDGTYLRVHVHPKRFPRCYEIDWKSRVIAVNEDFVVLDKPAGTTVGGTTDNIEESCATFTSHALG--------LTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKQVKKLYLALAAA--PVPLGTITHYMRPINV----APRLISEDSIER---------WSLCQLEVMECKKVPWPNSVI-------------------------------------------EEKYG--------VEDCGWPSKD----------------YAYECKINLLTGKTHQIRAQLAAHGAPLVGDSMYMPAAIAEIASPELNPFGKHKKHYIGEDEKEIAVTEWMARHGKEPNVAIGLQACQIS--WDDGEHSFEARAPWW 469          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A7S0H4S4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H4S4_9CRYP)

HSP 1 Score: 100 bits (250), Expect = 3.560e-20
Identity = 61/178 (34.27%), Postives = 96/178 (53.93%), Query Frame = 0
Query:  211 GAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHC-CRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAP 387
            G+Y+RVH  P+ F      DW+ R++ ++EDF+V++KP GVP++ TIDN ++ CV      +  +     SL P     SRLDVCT+G+++FA+ +E     N+    R+ +K Y  LL+ G  V TG++ H  CR +    + RP +   +       D     WQ+A   +L C P
Sbjct:   90 GSYVRVHAQPKRFLTVYKMDWNARVICESEDFIVINKPPGVPSLTTIDNAIE-CVMSQVEKIKNI-----SLMP----TSRLDVCTAGVLIFAKTREFCMSTNKAMSERRSEKIY-KLLSEGE-VQTGTVRHLFCRKRKGHKNSRPTLLRAWQDLTSRKDLQEEGWQDAVLEILDCRP 255          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A1Y1HRB5_KLENI (PseudoU_synth_2 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRB5_KLENI)

HSP 1 Score: 102 bits (254), Expect = 1.040e-19
Identity = 115/450 (25.56%), Postives = 166/450 (36.89%), Query Frame = 0
Query:  141 ELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFE---HMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRDVVGRVH-RGLRTD----------------------DDTSRFGQEPEA-IALQAARIEFEWQGRTVVFSTDRPSW 563
            +L+KFG+V+   ++      PP   +    +   +   K++D+     +S      MR+ RL   +       G YLRVH  P+ FP     DW  R++ +  D+V++DKPAGVP   T+DN V+NC      A+         L  PL    RLDV T G +V A+     +  N+L   R+V K Y AL    PP+  G + H  + K++     PRI +D  R+          W      +L       P  A                                                     G  R+ED G   P A A               + C + L TGRTHQ+R QLA +G  ++GDT Y       H  GL                         +D   +G EP   +ALQA ++   W   T  +    P W
Sbjct:   66 DLIKFGAVHYAPLLPP----PPPNSRPSVHSQWSESTAKASDEFGLHPSSQALKLMMRVGRLQ--DPFRLLRQGGYLRVHVHPKRFPRCYEVDWRGRVLTETPDYVILDKPAGVPVQGTVDNLVENCAACLLEALG--------LEEPLKVTHRLDVGTEGCLVLAKTPAFLRSFNQLLADRKVHKTYRALAAARPPL--GRLLHWTQPKSY----APRILSDETRD---------GWLPCELEILAVDEVPWPTGAV----------------------------------------------------GSLRMED-GGWPPQATA---------------YECTVRLITGRTHQVRAQLARVGCPLLGDTMYMPGPAIEHLAGLEPSSSSFDLLGAELSRKVAPLHCCLEDRRIYGAEPGGPLALQAWKLR--WDSGTEEYVAGTPWW 416          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: L1JPX0_GUITC (PseudoU_synth_2 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPX0_GUITC)

HSP 1 Score: 100 bits (248), Expect = 1.160e-19
Identity = 106/408 (25.98%), Postives = 158/408 (38.73%), Query Frame = 0
Query:  141 ELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRDVVGRVHRGLRTDD---DTSR-FGQEPEAIALQAAR 544
            ELVKFG+VY G   D         +KQ  + A R   ++  +  P                         G+Y+RVH  P+   +    DWS R++ +++DF+V+DKP GVP++ TIDNGV+ CV      +  +     SL P     SRLDVCT+G+++FA+ ++   + N+    R+  K YL L                  +        R   D   E          WQ+A   +L C                                                    P +++   QGG  +V +                            ++ L TGRTHQ+RLQ AA+G+ ++GDTRY    G + + +  DD   D SR FG +P+ I LQA R
Sbjct:   24 ELVKFGAVYTGPPQDA------MDKKQSPVKAVR--TMQDVELLP-------------------------GSYVRVHAQPKRCLSVYKIDWSARVIRESQDFIVIDKPPGVPSLTTIDNGVE-CVMSQVEKMRNI-----SLMP----TSRLDVCTAGVLIFAKTRDFCLKTNKAMSERRCDKVYLLL----------------SERELPRGEDLRSRQDLQEE---------GWQDAVLEILDC--------------------------------------------RCLLTFLQPFDLKQ--QGGRRKVFE---------------------------YSVRLITGRTHQIRLQFAALGAPVLGDTRYTPAAGLLFQSV--DDAIGDGSRVFGPDPDVIFLQARR 288          
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Match: A0A812T6T9_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812T6T9_9DINO)

HSP 1 Score: 100 bits (248), Expect = 1.190e-18
Identity = 95/348 (27.30%), Postives = 142/348 (40.80%), Query Frame = 0
Query:  211 GAYLRVHCDPRTFP--ASQVTDWSERIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCV--FQASLAVAGMPP-GSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEEMEAAAQGGEGRVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRDVVGRVHRGLRTDDDTSRFGQ-----EPEAIALQAARIEFE 548
            G  LRVH +P+ +   +++  DW++R+++ + ++VVVDKPAGVP  P + NG +  V    A+L++A     G  S    L A  RLDV TSG+ + AR +EAA++  +L    QV KRYLA++  G    T  +     S A  G   PR+ A     +  S      W+ AR+T+L         S  +V                                                        +DGS                          ++L+TGRTHQ+R QLA+MG+ +V D  Y  +   + RG   D+      Q     E   I LQ  ++ FE
Sbjct:  118 GGELRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSGGEDLVACQRLDVATSGLTLLARSREAAERFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVFGRPAPRLVAPLSAPVQDSRH---KWRNARTTIL---------STTSV--------------------------------------------------------EDGSQE----------------------MLLDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRGPCDDEVAENLVQSATSSEDVDIGLQCTQLSFE 375          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig685.14980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGX6_ECTSI3.100e-31294.65PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A835YKX4_9STRA7.150e-5535.88Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A5J4Z0G8_PORPP1.490e-4034.54RNA pseudouridine synthase 6, chloroplastic n=1 Ta... [more]
D7G898_ECTSI1.810e-3383.13Ribosomal large subunit pseudouridine synthase D n... [more]
A0A8J9RE80_9CHLO8.180e-2142.75Probable mitochondrial RNA pseudouridine synthase ... [more]
A0A2P6Q2U7_ROSCH1.600e-2027.23Putative diaminohydroxyphosphoribosylaminopyrimidi... [more]
A0A7S0H4S4_9CRYP3.560e-2034.27Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A1Y1HRB5_KLENI1.040e-1925.56PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
L1JPX0_GUITC1.160e-1925.98PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A812T6T9_9DINO1.190e-1827.30Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 394..421
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 74..564
NoneNo IPR availablePANTHERPTHR21600:SF52RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTICcoord: 74..564
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..565
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 241..500
e-value: 3.9E-24
score: 85.6
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 480..563
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 227..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig685contigE_fasciculatus_S2_contig685:14490..16187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig685.14980.1mRNA_E_fasciculatus_S2_contig685.14980.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig685 14490..16187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig685.14980.1 ID=prot_E_fasciculatus_S2_contig685.14980.1|Name=mRNA_E_fasciculatus_S2_contig685.14980.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=566bp
MLKGLLLTAAAANSWCPSRAFVGVRVELGRRSASAGRSVASQSSPLPPAS
PTAGVVPSSIMMTSHQHDAITIHSSSAAVTGLAERCSAETTYQGEHRVVH
IATPGAPPPWLEDEEQGEEQQATIAELVSHFGAVSRERGVELVKFGSVYI
GEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFEHMRLRRLH
PWESGNFPPHGAYLRVHCDPRTFPASQVTDWSERIVHKNEDFVVVDKPAG
VPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIV
VFARHKEAAKQLNELFRARQVKKRYLALLTPGPPVPTGSMAHCCRSKAFD
GSRRPRIYADFDRELLASDKWGGAWQEARSTVLLCAPATGPASAAAVAED
RERAEAAARALEESAAGAAARLEAELAAGLGLGSGSSPEEMEAAAQGGEG
RVEDDGSTAPDAEATMAAGAAREEGDHVPHLCAMELETGRTHQLRLQLAA
MGSAIVGDTRYRDVVGRVHRGLRTDDDTSRFGQEPEAIALQAARIEFEWQ
GRTVVFSTDRPSWAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR006145PsdUridine_synth_RsuA/RluA