prot_E_fasciculatus_S2_contig6841.14967.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6841.14967.1
Unique Name	prot_E_fasciculatus_S2_contig6841.14967.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	55

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot
Match: D7G6Q2_ECTSI (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q2_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.230e-14
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0

Query:    1 MACLARARIRHERYNECLLVIAMAVLCLCLGHDDLFDVMSSV 42
            MA LARARI HERYNECL VIA+AVLCLCLGHDDLF VMSSV
Sbjct:    1 MARLARARISHERYNECLSVIALAVLCLCLGHDDLFVVMSSV 42

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BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot
Match: A0A6H5JFA8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA8_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 3.940e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0

Query:    1 MACLARARIRHERYNECLLVIAMAVLCLCLGHDDLFDVMS 40
            MA LAR RIR+ERY+EC+LV+ +AVLC   G +D+F VM+
Sbjct:    1 MARLARGRIRYERYDECMLVLLLAVLCALAGEEDMFLVMA 40

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BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot
Match: A0A6H5JMI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI7_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 4.980e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0

Query:    1 MACLARARIRHERYNECLLVIAMAVLCLCLGHDDLFDVMS 40
            MA LAR RIR+ERY+EC+LV+ +AVLC   G +D+F VM+
Sbjct:    1 MARLARGRIRYERYDECMLVLLLAVLCALAGEEDMFLVMA 40

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BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot
Match: A0A6H5L0G5_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G5_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.400e-6
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0

Query:    1 MACLARARIRHERYNECLLVIAMAVLCLCLGHDDLFDVMSS 41
            MA LAR RIR+ERY+EC+LV+ +AVLC   G +D+F VM++
Sbjct:    1 MARLARGRIRYERYDECMLVLLLAVLCALAGEEDMFLVMAT 41

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BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot
Match: A0A6H5JKA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA9_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 3.600e-6
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:    1 MACLARARIRHERYNECLLVIAMAVLCLCLGHDDLFDVMS 40
            MA L R RIR+ERY+EC+ ++A+A+LC   G +DLF VM+
Sbjct:    1 MARLERGRIRYERYDECMQIMALALLCALAGEEDLFLVMT 40

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6841.14967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
D7G6Q2_ECTSI	2.230e-14	88.10	DDE Tnp4 domain-containing protein n=2 Tax=Ectocar...	[more]
A0A6H5JFA8_9PHAE	3.940e-7	60.00	Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMI7_9PHAE	4.980e-7	60.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L0G5_9PHAE	1.400e-6	58.54	DDE Tnp4 domain-containing protein n=3 Tax=Ectocar...	[more]
A0A6H5JKA9_9PHAE	3.600e-6	55.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 28..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 17..27
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..54
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6841	contig	E_fasciculatus_S2_contig6841:3968..4132 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6841.14967.1	mRNA_E_fasciculatus_S2_contig6841.14967.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6841 3838..4207 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6841.14967.1 ID=prot_E_fasciculatus_S2_contig6841.14967.1|Name=mRNA_E_fasciculatus_S2_contig6841.14967.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=55bp
MACLARARIRHERYNECLLVIAMAVLCLCLGHDDLFDVMSSVLACFNSKN
TTSS*