prot_E_fasciculatus_S2_contig678.14903.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI) HSP 1 Score: 499 bits (1286), Expect = 2.250e-176 Identity = 260/301 (86.38%), Postives = 264/301 (87.71%), Query Frame = 0
Query: 19 IGAGATVLDSVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
IGAGATVLDSVLW+LG DKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDE VSASISARDLFDKLCEAWQT+NLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIR NLVKCTARDRYGKET+RIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRL+RDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA LFIHDA ENLMFFNTF
Sbjct: 27 IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA---LFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM) HSP 1 Score: 179 bits (455), Expect = 3.880e-48 Identity = 105/310 (33.87%), Postives = 178/310 (57.42%), Query Frame = 0
Query: 20 GAGATVLD-SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
G+GAT + S++WR G + RD R+ A + + + +A ++V+ ML +SSP ER+ DEP S +SARDLF E ++A WR ++++ +C D + MV K+ + +P +YVV+M K+V++++ + +D+YG ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K L +ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 310 GSGATTDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSARDLF----EMESVKKALPSEANNPWRLLLNYIMVMCRDKSGMVMKV-SQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 607
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI) HSP 1 Score: 177 bits (448), Expect = 8.340e-47 Identity = 102/301 (33.89%), Postives = 171/301 (56.81%), Query Frame = 0
Query: 28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
S++WR G + RD R+ A + + + +A ++V ML +S+P ER+ DEP SA +SARDLF+ N +A WR ++++ +C D + MV K+ + +P +YVV+M K+V++++ +D+YG ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ V E + ++ +R RRKF +K L +ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 381 SLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSARDLFNME----SVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 669
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP) HSP 1 Score: 175 bits (443), Expect = 1.820e-46 Identity = 103/306 (33.66%), Postives = 172/306 (56.21%), Query Frame = 0
Query: 28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
S++WR G + RD R+ A + + + +A ++V ML +SSP ER+ DEP S +SARDLFD + KA+P WR ++++ +C D + MV K+ + +P +YVV+M K+V++++ +D+YG ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K L +ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 312 SLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARDLFDME---------SVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 600
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL) HSP 1 Score: 174 bits (441), Expect = 5.910e-46 Identity = 99/305 (32.46%), Postives = 173/305 (56.72%), Query Frame = 0
Query: 28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIP--------GSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
S++WR G + RD R+ + + + +A ++V+ ML +SSP ER+ DE SA +SARDLF+ + KA+P WR +++++ +C D + M+ K+ + +YVV+M K+V++++ V +D+YG ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K + + +L + ++ D++ RSLDRLD A++ LD LM F F
Sbjct: 353 SLVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFNME---------SVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIA-----RSEQLVEALDIDKFDKLSRSLDRLDRAIIHLDGMLMLFRDF 641
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.440e-45 Identity = 102/310 (32.90%), Postives = 173/310 (55.81%), Query Frame = 0
Query: 20 GAGATVLD--SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
G+ A +D S++WR G + RD R+ A + + + +A ++V ML +S+P ER+ DEP+SA +SARDLF N +++ WR ++++ +C D + MV K+ D R YVV+M K+V++++ +D++G ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L +++V +QE+PKRAD NP TF+ W++ + + E + ++ +R RRKF +K L ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 353 GSSAVDMDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSARDLFGME----SVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEGNDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 651
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.000e-44 Identity = 105/306 (34.31%), Postives = 170/306 (55.56%), Query Frame = 0
Query: 22 GATVLDSVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
GA +++WR GAD+ RD R+ A + + + +A ++V ML +SSP ER+ DE S ++AR+LF S L K+ WR +++++ +C D + MV K+ D R YVV+M K+V ++R +D++G ++RI+ +L++ + L+QQ +GE+A++P +DAR RLY L +R+V +QEVPKRAD NP T Y W++ ++ + V E + ++ +R RRK +K L +ND K D++ R+LDRLD A+L+LD LM + F
Sbjct: 368 GALAEQALVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTARELFAVPAVK---SALPKDSK-DTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNK---ELIARSDQLVEANDVAK--FDKLSRALDRLDRAVLQLDAMLMLYRDF 662
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC) HSP 1 Score: 165 bits (418), Expect = 1.090e-42 Identity = 97/305 (31.80%), Postives = 174/305 (57.05%), Query Frame = 0
Query: 28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
S++WR G + R+ R+ A + + + +A ++V ML++SSP ER+ +E SA +SARDL++ T KA+P WR +++++ +C D + M+ K+ D+ R YVV+M K+V++++ +DR+G ++RI+ +L++ + L+Q+ +GE+A++P ++AR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RR F +K + + +L + ++ D++ RSLDRLD A+++LD LM F F
Sbjct: 358 SLVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSARDLYNME---------TVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKELIA-----RSEQLVEAHDLDKFDKLSRSLDRLDRAIIQLDGMLMLFRDF 646
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A8K1CIH0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIH0_PYTOL) HSP 1 Score: 162 bits (411), Expect = 7.920e-42 Identity = 91/300 (30.33%), Postives = 170/300 (56.67%), Query Frame = 0
Query: 28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
S++WR G D+ RD R+ A + + + +A ++V ML +SSP ER+ DE S ++AR+LF + + ++ WR +++++ +C D + MV K+ D R Y V+M K+++++R + +++G +++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L R+ +V +QE+PKRAD NP T Y W++ + + E + ++ +R RRK D+A + + + +L ++ + + D++ R+LDRLD A++ LD LM + F
Sbjct: 331 SLVWRCGVDQLLRDLRHRACVKFATENI--NNVAGVLVAAMLHHSSPHEREKDEATSFPVTARELFSMP----EVKDALPKESKDTWRLLLNYITVMCRDKSGMVMKVAAEAFDPTQARAGDGGQYAVHMKKIIEFLRQSTSHAYISEKFGVQSARIIRLLMEKRQLEQKTIGELALLPSNDARRRLYELYRENLVKLQEIPKRADHNPAFTMYCWSVDVPGLELSIAERIQDSLSKLRRRRK-----DEAEQNKELIARSDQLVDENDLAKFDKISRALDRLDRAIIHLDNMLMLYRDF 619
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A024GFJ4_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GFJ4_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.630e-40 Identity = 89/301 (29.57%), Postives = 177/301 (58.80%), Query Frame = 0
Query: 28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-WRRFVSWMSALCTDLTSMVSKIPG-----SDTQNP---RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
S++WR G D+ R+ R+ A + + + +A ++V ML S ER+ +EP S ++AR+++ K+ E Q K + D WR +++++ + D + M++++ + TQ +YVV+M + Y++ + +D++G +++RI+ ++L+ + L+Q+ +GE+A++P ++AR RLY L RD+++ +QE+PKR+D NP T Y W++ + +V+ E + ++ +R RR F+ +K + +++L + + E+ D++ + LDRLD ++L+LDENLM + F
Sbjct: 359 SLVWRCGTDQLLRELRHDAFVRFAMENV--NHVAGVIVSAMLSYSMSHERESNEPTSFPMTAREIY-KVDEVKQALP----KEIKDTWRLLLNYLAVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKFGVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIA-----RSSQLVEENDLEKFDKLSQGLDRLDRSILQLDENLMLYRDF 647 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig678.14903.1 ID=prot_E_fasciculatus_S2_contig678.14903.1|Name=mRNA_E_fasciculatus_S2_contig678.14903.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=320bpback to top |