prot_E_fasciculatus_S2_contig678.14903.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig678.14903.1
Unique Nameprot_E_fasciculatus_S2_contig678.14903.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length320
Homology
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 2.250e-176
Identity = 260/301 (86.38%), Postives = 264/301 (87.71%), Query Frame = 0
Query:   19 IGAGATVLDSVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            IGAGATVLDSVLW+LG DKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDE VSASISARDLFDKLCEAWQT+NLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIR NLVKCTARDRYGKET+RIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRL+RDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA   LFIHDA                               ENLMFFNTF
Sbjct:   27 IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA---LFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM)

HSP 1 Score: 179 bits (455), Expect = 3.880e-48
Identity = 105/310 (33.87%), Postives = 178/310 (57.42%), Query Frame = 0
Query:   20 GAGATVLD-SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            G+GAT  + S++WR G  +  RD R+ A +    +    + +A ++V+ ML +SSP ER+ DEP S  +SARDLF    E         ++A   WR  ++++  +C D + MV K+   +  +P         +YVV+M K+V++++    +   +D+YG  ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D+++ +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RRKF    +K    L         +ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  310 GSGATTDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSARDLF----EMESVKKALPSEANNPWRLLLNYIMVMCRDKSGMVMKV-SQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 607          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI)

HSP 1 Score: 177 bits (448), Expect = 8.340e-47
Identity = 102/301 (33.89%), Postives = 171/301 (56.81%), Query Frame = 0
Query:   28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            S++WR G  +  RD R+ A +    +    + +A ++V  ML +S+P ER+ DEP SA +SARDLF+         N    +A   WR  ++++  +C D + MV K+   +  +P         +YVV+M K+V++++        +D+YG  ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D+++ +QE+PKRAD NP  TF+ W++   Q+   V E +  ++  +R RRKF    +K    L         +ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  381 SLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSARDLFNME----SVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 669          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP)

HSP 1 Score: 175 bits (443), Expect = 1.820e-46
Identity = 103/306 (33.66%), Postives = 172/306 (56.21%), Query Frame = 0
Query:   28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            S++WR G  +  RD R+ A +    +    + +A ++V  ML +SSP ER+ DEP S  +SARDLFD           +  KA+P      WR  ++++  +C D + MV K+   +  +P         +YVV+M K+V++++        +D+YG  ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D+++ +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RRKF    +K    L         +ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  312 SLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARDLFDME---------SVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 600          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL)

HSP 1 Score: 174 bits (441), Expect = 5.910e-46
Identity = 99/305 (32.46%), Postives = 173/305 (56.72%), Query Frame = 0
Query:   28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIP--------GSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            S++WR G  +  RD R+   +    +    + +A ++V+ ML +SSP ER+ DE  SA +SARDLF+           +  KA+P      WR  +++++ +C D + M+ K+            +   +YVV+M K+V++++   V    +D+YG  ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D++V +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RRKF    +K  +       + +L    + ++ D++ RSLDRLD A++ LD  LM F  F
Sbjct:  353 SLVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFNME---------SVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIA-----RSEQLVEALDIDKFDKLSRSLDRLDRAIIHLDGMLMLFRDF 641          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.440e-45
Identity = 102/310 (32.90%), Postives = 173/310 (55.81%), Query Frame = 0
Query:   20 GAGATVLD--SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            G+ A  +D  S++WR G  +  RD R+ A +    +    + +A ++V  ML +S+P ER+ DEP+SA +SARDLF          N   +++   WR  ++++  +C D + MV K+     D    R      YVV+M K+V++++        +D++G  ++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  +++V +QE+PKRAD NP  TF+ W++    +   + E +  ++  +R RRKF    +K    L          ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  353 GSSAVDMDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSARDLFGME----SVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENK---ELIARSEQLVEGNDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 651          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA)

HSP 1 Score: 169 bits (427), Expect = 7.000e-44
Identity = 105/306 (34.31%), Postives = 170/306 (55.56%), Query Frame = 0
Query:   22 GATVLDSVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            GA    +++WR GAD+  RD R+ A +    +    + +A ++V  ML +SSP ER+ DE  S  ++AR+LF         S L K+     WR  +++++ +C D + MV K+     D    R      YVV+M K+V ++R        +D++G  ++RI+ +L++ + L+QQ +GE+A++P +DAR RLY L  +R+V +QEVPKRAD NP  T Y W++   ++ + V E +  ++  +R RRK     +K    L         +ND  K   D++ R+LDRLD A+L+LD  LM +  F
Sbjct:  368 GALAEQALVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTARELFAVPAVK---SALPKDSK-DTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNK---ELIARSDQLVEANDVAK--FDKLSRALDRLDRAVLQLDAMLMLYRDF 662          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC)

HSP 1 Score: 165 bits (418), Expect = 1.090e-42
Identity = 97/305 (31.80%), Postives = 174/305 (57.05%), Query Frame = 0
Query:   28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            S++WR G  +  R+ R+ A +    +    + +A ++V  ML++SSP ER+ +E  SA +SARDL++           T  KA+P      WR  +++++ +C D + M+ K+     D+   R      YVV+M K+V++++        +DR+G  ++RI+ +L++ + L+Q+ +GE+A++P ++AR RLY L  D++V +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RR F    +K  +       + +L    + ++ D++ RSLDRLD A+++LD  LM F  F
Sbjct:  358 SLVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSARDLYNME---------TVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKELIA-----RSEQLVEAHDLDKFDKLSRSLDRLDRAIIQLDGMLMLFRDF 646          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A8K1CIH0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIH0_PYTOL)

HSP 1 Score: 162 bits (411), Expect = 7.920e-42
Identity = 91/300 (30.33%), Postives = 170/300 (56.67%), Query Frame = 0
Query:   28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            S++WR G D+  RD R+ A +    +    + +A ++V  ML +SSP ER+ DE  S  ++AR+LF       +  +    ++   WR  +++++ +C D + MV K+     D    R      Y V+M K+++++R +       +++G +++RI+ +L++ + L+Q+ +GE+A++P +DAR RLY L R+ +V +QE+PKRAD NP  T Y W++    +   + E +  ++  +R RRK     D+A  +  +   + +L ++ +  + D++ R+LDRLD A++ LD  LM +  F
Sbjct:  331 SLVWRCGVDQLLRDLRHRACVKFATENI--NNVAGVLVAAMLHHSSPHEREKDEATSFPVTARELFSMP----EVKDALPKESKDTWRLLLNYITVMCRDKSGMVMKVAAEAFDPTQARAGDGGQYAVHMKKIIEFLRQSTSHAYISEKFGVQSARIIRLLMEKRQLEQKTIGELALLPSNDARRRLYELYRENLVKLQEIPKRADHNPAFTMYCWSVDVPGLELSIAERIQDSLSKLRRRRK-----DEAEQNKELIARSDQLVDENDLAKFDKISRALDRLDRAIIHLDNMLMLYRDF 619          
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Match: A0A024GFJ4_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GFJ4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.630e-40
Identity = 89/301 (29.57%), Postives = 177/301 (58.80%), Query Frame = 0
Query:   28 SVLWRLGADKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-WRRFVSWMSALCTDLTSMVSKIPG-----SDTQNP---RYVVNMAKMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 319
            S++WR G D+  R+ R+ A +    +    + +A ++V  ML  S   ER+ +EP S  ++AR+++ K+ E  Q       K + D WR  +++++ +  D + M++++       + TQ     +YVV+M  +  Y++   +    +D++G +++RI+ ++L+ + L+Q+ +GE+A++P ++AR RLY L RD+++ +QE+PKR+D NP  T Y W++    + +V+ E +  ++  +R RR F+   +K  +       +++L  + + E+ D++ + LDRLD ++L+LDENLM +  F
Sbjct:  359 SLVWRCGTDQLLRELRHDAFVRFAMENV--NHVAGVIVSAMLSYSMSHERESNEPTSFPMTAREIY-KVDEVKQALP----KEIKDTWRLLLNYLAVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKFGVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIA-----RSSQLVEENDLEKFDKLSQGLDRLDRSILQLDENLMLYRDF 647          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig678.14903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMS6_ECTSI2.250e-17686.38DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
H3GD40_PHYRM3.880e-4833.87DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A0W8C9C8_PHYNI8.340e-4733.89DNA-directed RNA polymerase III subunit RPC3 n=12 ... [more]
G4Z0C0_PHYSP1.820e-4633.66DNA-directed RNA polymerase III subunit RPC3 (Frag... [more]
A0A0P1AWK6_PLAHL5.910e-4632.46DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A3R7FY14_9STRA2.440e-4532.90DNA-directed RNA polymerase III subunit RPC3 n=3 T... [more]
A0A5D6XL36_9STRA7.000e-4434.31DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A484E8N6_BRELC1.090e-4231.80DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A8K1CIH0_PYTOL7.920e-4230.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GFJ4_9STRA3.630e-4029.57DNA-directed RNA polymerase III subunit RPC3 n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..312
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 149..238
e-value: 8.7E-28
score: 98.0
IPR024550TFIIEalpha/SarR/Rpc3 HTH domainPFAMPF02002TFIIE_alphacoord: 159..252
e-value: 2.2E-7
score: 30.7
IPR039748DNA-directed RNA polymerase III subunit RPC3PANTHERPTHR12949RNA POLYMERASE III DNA DIRECTED -RELATEDcoord: 27..318
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 156..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig678contigE_fasciculatus_S2_contig678:23023..29309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig678.14903.1mRNA_E_fasciculatus_S2_contig678.14903.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig678 23023..29309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig678.14903.1 ID=prot_E_fasciculatus_S2_contig678.14903.1|Name=mRNA_E_fasciculatus_S2_contig678.14903.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=320bp
GGGGGGGGGGGGGGGGGGIGAGATVLDSVLWRLGADKFHRDFRNLALLGL
VQDRFPKSKLAYLVVKVMLDNSSPTERKVDEPVSASISARDLFDKLCEAW
QTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMA
KMVQYIRSNLVKCTARDRYGKETSRIMEILLQNKYLDQQQVGEMAMIPPS
DARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESL
YKAMLNMRLRRKFVYSNDKACMHLFIHDAAARLSNDAEKERLDQVRRSLD
RLDTALLRLDENLMFFNTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR039748RPC3
IPR024550TFIIEa/SarR/Rpc3_HTH_dom
IPR036388WH-like_DNA-bd_sf