prot_E_fasciculatus_S2_contig6778.14899.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6778.14899.1
Unique Nameprot_E_fasciculatus_S2_contig6778.14899.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length241
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6778.14899.1 vs. uniprot
Match: A0A6H5KGJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ2_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.320e-109
Identity = 196/240 (81.67%), Postives = 206/240 (85.83%), Query Frame = 0 
Query:    1 WFLWVAAFCVLVAICGLCSCYVVTPVVRSCRERFGVKHGWKPKGVVVRQEQHQRXXXXXXXXXXXXXXXXXXDRGRPRGTGERERGDARDSKSHHQRYHHWYLDDLLKITPEDEVEFGVRHSPAYTATPTPRVARTASGLAPQSRRHQYRPQHRPQEKRRASFPMSSMSSSGESCSRSVLSAPARRKSSXXXXXXXHAHNRRRSVSSGTRREVTVVDEPGIGAEATLRGGGWMGAANGRL 240
            WFLWVAAFCVLVAICGLCSCY+VTP+VRSCRE  GV+HG +PKGVVVRQ+QH   XXXXXXXXXXXXXXXXX   RPR TGERE+ DARDSKSH QR+HHWYLDDLLKITPEDEVEFGVRHSPAYT TPTPR +RTASGLAPQSRRH   PQHRP+E RRASFPMSSMSS GE CSRSVL AP RRKSS       HAHNR  SVSS TRR V VVD+PGIGAEATLRGGGWMGAANGRL
Sbjct:  299 WFLWVAAFCVLVAICGLCSCYMVTPLVRSCRELLGVEHGRQPKGVVVRQDQHVHQXXXXXXXXXXXXXXXXX---RPRETGEREKCDARDSKSHRQRHHHWYLDDLLKITPEDEVEFGVRHSPAYTVTPTPRASRTASGLAPQSRRHNNHPQHRPRE-RRASFPMSSMSSRGEPCSRSVLPAPVRRKSSDNYYDDYHAHNRSHSVSSETRRAVAVVDDPGIGAEATLRGGGWMGAANGRL 534
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6778.14899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGJ2_9PHAE1.320e-10981.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..68
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..240
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.721
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6778contigE_fasciculatus_S2_contig6778:457..2508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6778.14899.1mRNA_E_fasciculatus_S2_contig6778.14899.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6778 5..2508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6778.14899.1 ID=prot_E_fasciculatus_S2_contig6778.14899.1|Name=mRNA_E_fasciculatus_S2_contig6778.14899.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=241bp
WFLWVAAFCVLVAICGLCSCYVVTPVVRSCRERFGVKHGWKPKGVVVRQE
QHQRHEKHQQQQHQLQQQQQQPDRGRPRGTGERERGDARDSKSHHQRYHH
WYLDDLLKITPEDEVEFGVRHSPAYTATPTPRVARTASGLAPQSRRHQYR
PQHRPQEKRRASFPMSSMSSSGESCSRSVLSAPARRKSSDYYYDDYHAHN
RRRSVSSGTRREVTVVDEPGIGAEATLRGGGWMGAANGRL*
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