prot_E_fasciculatus_S2_contig6719.14834.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6719.14834.1
Unique Nameprot_E_fasciculatus_S2_contig6719.14834.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length195
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6719.14834.1 vs. uniprot
Match: D8LQV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV1_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 6.640e-123
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0 
Query:    3 QAIQGQVQLFFGCLGALAARFGVRTPVEHAMFGGYISVLTGLTEFVLSIIAGEDEDSSSLLGISIMAFAEIVGSLLVLWRWRKGMANDRGGGSHRKSEQLQEDAKCSLCVGLISLAVVAALVLERLVSWADSATGICLSLYIVYEGVRSVWEARQQFVAHLEGDEGLRLVPLMHERLLVDKGEDTALLEETM 194
            +A QGQ+QLFFGCLG LAARFGVRTPVEHAMFGGYISVLTG TEFVLSIIAGEDEDSSSLLGISIMAFAEIVGSLLVLWRWRKGM NDRGG SHRKSEQLQEDAKCSLCVGLISLAVVAALVLERLVSWADSATGICLSLYIVYEG+ SVWEARQQFVAHLEGDEGLRLVPLMHERLL+DK E TALLEETM
Sbjct:    8 EAFQGQMQLFFGCLGGLAARFGVRTPVEHAMFGGYISVLTGATEFVLSIIAGEDEDSSSLLGISIMAFAEIVGSLLVLWRWRKGMGNDRGGASHRKSEQLQEDAKCSLCVGLISLAVVAALVLERLVSWADSATGICLSLYIVYEGLMSVWEARQQFVAHLEGDEGLRLVPLMHERLLLDKEEGTALLEETM 199
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BLAST of mRNA_E_fasciculatus_S2_contig6719.14834.1 vs. uniprot
Match: A0A7S2UWE3_9STRA (Transmembrane protein 163 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWE3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.530e-8
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:   30 EHAMFGGYISVLTGLTEFVLSIIAGEDEDSSSLLGISIMAFAEIVGSLLVLWRWR 84
             +A+   Y+S++ GL EFV S +AGE EDS S++GI+ MA  E  GS LV WRW+
Sbjct:   35 RNAIISAYLSIVAGLLEFVFSYMAGESEDSVSIMGIASMAIIEAAGSALVAWRWQ 89
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BLAST of mRNA_E_fasciculatus_S2_contig6719.14834.1 vs. uniprot
Match: A0A836CMU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU9_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.510e-7
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 0 
Query:   94 GSHRKSEQLQEDAKCSLCVGLISLAVVAALVLERLVSWADSATGICLSLYIVYEGVRSVWEARQQF--------VAHLEGDEGLRLVPLM 175
            G+  +S  +  DA CS C G +S  V  AL+++ +V WADSA G+ L+ YI+++GV ++  AR ++         A   G  G R  PL+
Sbjct:    4 GAQLQSIVVITDAHCSRCTGYVSACVALALLIQGVVWWADSALGLLLACYIIFDGVSNMQAARAEWQTLKDAPGAAPTNGTGGARSEPLL 93
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6719.14834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQV1_ECTSI6.640e-12393.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UWE3_9STRA1.530e-850.91Transmembrane protein 163 n=2 Tax=Fibrocapsa japon... [more]
A0A836CMU9_9STRA7.510e-735.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002524Cation efflux proteinPFAMPF01545Cation_effluxcoord: 33..156
e-value: 2.0E-8
score: 34.2
IPR027469Cation efflux transmembrane domain superfamilyGENE3D1.20.1510.10coord: 29..159
e-value: 2.2E-7
score: 32.6
IPR027469Cation efflux transmembrane domain superfamilySUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 48..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 33..52
NoneNo IPR availableTMHMMTMhelixcoord: 62..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6719contigE_fasciculatus_S2_contig6719:1731..7282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6719.14834.1mRNA_E_fasciculatus_S2_contig6719.14834.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6719 1731..7282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6719.14834.1 ID=prot_E_fasciculatus_S2_contig6719.14834.1|Name=mRNA_E_fasciculatus_S2_contig6719.14834.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=195bp
MVQAIQGQVQLFFGCLGALAARFGVRTPVEHAMFGGYISVLTGLTEFVLS
IIAGEDEDSSSLLGISIMAFAEIVGSLLVLWRWRKGMANDRGGGSHRKSE
QLQEDAKCSLCVGLISLAVVAALVLERLVSWADSATGICLSLYIVYEGVR
SVWEARQQFVAHLEGDEGLRLVPLMHERLLVDKGEDTALLEETM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027469Cation_efflux_TMD_sf
IPR002524Cation_efflux