Homology
BLAST of mRNA_E_fasciculatus_S2_contig9851.17859.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)
HSP 1 Score: 963 bits (2490), Expect = 0.000e+0
Identity = 617/874 (70.59%), Postives = 632/874 (72.31%), Query Frame = 1
Query: 1 KMALLPKMVSVMKSYAGQRAADGAQAASNGGXXXXXXXXXXHGAARATXXXXSAAVSFQPRAALSCLRVLCAVGGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPFDLSETATTT------------PPSQESATSARVEGKARRGRAGGPTGSPPPP-QEQLALLAVRLAKVLVQSGRGVALALSRTPLLGSTKGWLALGQGSRRTLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLSGGVG------------------------------------------------------DGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLPPRLAFYRALHQLACACVLPPGGDAAGRNXXXXXXXXXXXXXKAGVGAAGAGAREETESFSVGGVAVVPESWADVGDTVDAAVEAALLWLLSGARGXXXXXXXXTPETAQQAAAVHLVACWVERYQAMSRTAGRRASRHLESTVEDAAVLFSSLLASPALPLPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-GLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXX--------------ASPPAAFLRRVRRADAGARWLGCRLLALGCRGGVRGAGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPAEEGSKRPNGDPAAAASXXXXXXXXASASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPLASQASFGGGKAAATAVSACLSLLVQLEREESAYVWGGGXXXXXXXXXTGCVSPEVKLYHLANACLYGASVLSGLGAVQNFDWLFGRY 2376
+MALLPK+ SV+KSYA Q AADGAQAAS+GG HGAARAT + AVSF+PRAALSCLRVLCAV GRAPWAAERVASEPGLLDAVREAFLEPRADGTLP DLSETA T PP QE ATSAR EGKAR G PP QEQLALLAVRLA+VLVQSGRGVALALS+TPLLGSTKGWLALGQGSRR LPALEAVQREVLELWRCCLSYG+DVAAADTVVLVARGQGWWPGLSGGVG XXXX DSLPPRLAFYRALHQLACACVLPPG AAGRN KAG GAAG G R+E E FSVGGVAVVPESWADVGDTVDAAVE ALLWLLSG RG XX ETAQQAAAVHLVACWVERYQAMSRT GRR SRHLEST EDAAVLFSSLLASPALPLPAAVA XXXXXXXXXXX A GLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXX A PPA FLRRVRRA+AGARWLGCRLLALGCRGG R GWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSP EEGS+RP+ DPAAAA AS SLLR LFRGAISDPVALSQSSFHLDGRWASLQSLKAC PPGTASLLPLPPHWLFLPLASQ GG KAA+TAVSACLSLLVQLEREESAYVW GG X TGCVSPEVKLYHLANACLYGASVLSGLG VQ+FDWLF RY
Sbjct: 591 EMALLPKIASVIKSYADQVAADGAQAASDGGGGLGDKGSF-HGAARATAA--ATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETAPATVTATAIPKQLSPPPPQEPATSARAEGKARTEGPRDANGCPPXXXQEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLSGGVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEEPTAXXXXXXXXXXXXXXXXXXXXXXXVGAQSSSGVAQSTSGGAGGGSRGGDSLPPRLAFYRALHQLACACVLPPGVSAAGRNKNDGAETAGGDG-KAGAGAAGTGVRKEAEGFSVGGVAVVPESWADVGDTVDAAVEGALLWLLSGVRGGGRVGGXXAAETAQQAAAVHLVACWVERYQAMSRTIGRRGSRHLESTAEDAAVLFSSLLASPALPLPAAVAATTAVTRRGDQXXXXXXXXXXXSGDGFSQRGVSSGEAAAAAGLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXXXXXXXXXXXPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALGCRGGGREGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPEEEGSERPSDDPAAAA----VGTAAASTSLLRMLFRGAISDPVALSQSSFHLDGRWASLQSLKACTPPGTASLLPLPPHWLFLPLASQ---GGEKAASTAVSACLSLLVQLEREESAYVWSGGGXGG-----TGCVSPEVKLYHLANACLYGASVLSGLGVVQHFDWLFSRY 1448
BLAST of mRNA_E_fasciculatus_S2_contig9851.17859.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)
HSP 1 Score: 928 bits (2399), Expect = 0.000e+0
Identity = 599/858 (69.81%), Postives = 617/858 (71.91%), Query Frame = 1
Query: 4 MALLPKMVSVMKSYAGQRAADGAQAASNGGXXXXXXXXXXHGAARATXXXXSAAVSFQPRAALSCLRVLCAVGGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPFDLSETA--TTTP-----PSQESATSARVEGKARRGRAGGPTGSPPPP--QEQLALLAVRLAKVLVQSGRGVALALSRTPLLGSTKGWLALGQGSRRTLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLS-GGVG----------------------DGA--------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLPPRLAFYRALHQLACACVLPPGGDAAGRNXXXXXXXXXXXXXKAGVGAAGAGAREETESFSVGGVAVVPESWADVGDTVDAAVEAALLWLLSGARGXXXXXXXXTPETAQQAAAVHLVACWVERYQAMSRTAGRRASRHLESTVEDAAVLFSSLLASPALPLPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXX-------------ASPPAAFLRRVRRADAGARWLGCRLLALGCRGGVRGAGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPAEEGSKRPNGDPAAAASXXXXXXXXASASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPLASQASFGGGKAAATAVSACLSLLVQLEREESAYVWGGGXXXXXXXXXTGCVSPEVKLYHLANACLYGASVLSGLGAVQNFDWLFGRY 2376
MALLPK+ SV+KS AGQ +ADGAQA S+GG HGAARAT +AAVS +PRAALSCLRVLCAV GRAPWAAERVASEPGLLDAVREAFLEPR DGTLP DLSE A TTT P QE AT AR EGKAR G G G P QE LALLAVRLA+VLVQSGRGVALALS+TPLLGSTKGWLALGQGSRR LPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLS GGVG DG DS+PPRLAFYRALHQLACACVLPPGG+AAGRN KAGVGAAGAG R+E E FSVGGV VVPESWADVGDTVDAAVEA LLWLL RG T ETAQQAAAVHLVACW+ERYQAMSRTAGRRAS HLES EDAAVLFSSLLAS ALPL AAVA XXXXXXXXXXXXXX AGLDWL GVFRLGLACERA+PGEAAAALASAPEATA XX A PPA FLRRVRRA+AGARWLGCRLLAL RG RG GWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPAE GS+RP+ DPAA XXXXXX SASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPL SQ GGGKAA+ AVSACLSLLV+LEREES YVWG XXXXXXX TGC PEVKLYHLANACLYGASVLSGLGAVQNFDWLF RY
Sbjct: 144 MALLPKIASVIKSCAGQVSADGAQAGSDGGGGLGDMGSV-HGAARATAE--AAAVSLRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRTDGTLPLDLSEAAPATTTKQLSPAPPQEPATPARAEGKARGGGPGDANGCPXXXXXQEGLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLSVGGVGXXXXXXXXXAPLVADTVTVERGDGGXXXXXXXXXXXXXXXTAATPVAAKSLPVGVGVGGARSTSGGASGGSRGGDSVPPRLAFYRALHQLACACVLPPGGNAAGRNKNDGAETAGGDG-KAGVGAAGAGLRKEAEGFSVGGVVVVPESWADVGDTVDAAVEAVLLWLLRSVRGGGGVDGGGTAETAQQAAAVHLVACWMERYQAMSRTAGRRASGHLESIAEDAAVLFSSLLASSALPLMAAVAAAVTRGCDQSGGGXXXXXXXXXXXXXXSFSQRGVSSGEAVTAGLDWLCGVFRLGLACERAMPGEAAAALASAPEATAAALXXFLATAGPTAGAVXXGGALTTPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALVSRGVGRGGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPAENGSERPSDDPAA-----XXXXXXXSASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPLVSQ---GGGKAASMAVSACLSLLVELEREESTYVWGXXXXXXXXX--TGCNPPEVKLYHLANACLYGASVLSGLGAVQNFDWLFSRY 987
BLAST of mRNA_E_fasciculatus_S2_contig9851.17859.1 vs.
Match: RPAP1_C (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)
HSP 1 Score: 84.7 bits (208), Expect = 4.980e-13
Identity = 265/767 (34.55%), Postives = 320/767 (41.72%), Query Frame = 1
Query: 178 PRAALSCLRVLCAVGGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPFDLSETATTTPPSQESATSARVEGKARRGRAGGPTGSPPPPQEQLALLAVRLAKVLVQSGRGVA---LALSRTPLLGSTKGWLALG-QGSRRTLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLSGGVGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLPP-RLAFYRALHQLACACVLPPGGDAAGRNXXXXXXXXXXXXXKAGVGAAGAGAREETESFSVGGVAVVPESWADVGDTVDAAVEAALLWLLSGARGXXXXXXXXTPETAQQAAAVHLVACWVERYQAMSRTAGRRASRHLESTVEDAAVLFSSLLASPALPLPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXXASPPAAFLRRVRRADA------GARWLGCRLLALGCRGGVRGAGWPWAALRRD-------CALQAMALCERGDEAIA-----VGLLAEALPGSTVDSPAEEGSKRPNGDPAAAASXXXXXXXXASASLLRTLFRGAISDPVALSQS-SFHLDGRWASLQSLK----------ACAPPGTASLLPLPPHWLFLPLASQASFGGGKAAATAVSACLSLLVQLEREESAYVWGGGXXXXXXXXXTGCVSPEVKLYHLANACLYGASVLSGLGAVQNFDWLFGRY 2376
P A+ CLRVL AV + AER+ +EPGLLDAVREAF+EP G P LS G GG TGS + A+ A+RLA+ + R A L R +L + + LALG L A Q E L +W CL YG+ + AA+TV+ +A+ AA XXXXXXXXXXXXXXX S P A YR L LA A P D R A E E + + P++ A + + + AA+ AA L E Q AAA L A RTA L + V L A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DWL V +L LAC+ A P AAA A XXXXXXXXXXXXXXXX L +LA G WP A L C L ++ E G+E A +GL A + V EE K S L L+ G++ + L+ S + H G W SLQSL A A ASLLPLPPHWL LPL S+ G G AA AVS CL LL+ ++ + + ++PE++LYHL AC YG VL+ F L R+
Sbjct: 393 PPGAVECLRVLVAVARSSAANAERIIAEPGLLDAVREAFVEPDTAGAPPVPLS--------------------CGSSGGGGGSTGSGNDVERSPAVWALRLARAVCHGSRLAARHVLYGGRGGILDAAQALLALGGXXXXXXXXVLAAAQCEALAVWHACLRYGLALEAAETVLPLAQAL-------------AAPRSAAXXXXXXXXXXXXXXXGHQWGALTSSRSPIAAALYRCLVALAYAST-PLPQDVIDR----------------------ASEPERLELEADAKLRPAPQALAALRERM-AAIAAATL-----------------AELQQAAAAQELSA----------RTAAFAPMLQLVAAV---------------LATQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADWLCIVCQLLLACDSAQPEACAAAXXXXSNADVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACEALHACVLARGL--------WPLAVLPAARAGAVAACPLFMVSEFEAGEEYPAAQMMLLGLRAGVAGSAEVQQGVEEDDKP-------------------SLPFLEALYCGSMCEVATLAHSRALHTGGAWHSLQSLTLRQRQHAVGAAAAAAEPASLLPLPPHWLLLPLTSR---GSGAAAVRAVSQCLRLLLSVDESPALSTY------------MRALAPELRLYHLMAACTYGQGVLADPAVAPPFRALLSRW 1018
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9851.17859.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 3
0 1 Expect = 0.00e+0 / Id = 70.59 Expect = 0.00e+0 / Id = 69.81 Expect = 4.98e-13 / Id = 34.55 Sequence Uncharacterized Uncharacterized RPAP1_C
Match Name E-value Identity Description
Uncharacterized 0.000e+0 70.59 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more] Uncharacterized 0.000e+0 69.81 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more] RPAP1_C 4.980e-13 34.55 domain-containing protein n=1 Tax=Tribonema minus ... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 0 Start 1 Seed ortholog score 978.0 Seed ortholog evalue 2.6e-282 Seed eggNOG ortholog 2880.D8LHI7 Preferred name RPAP1 Model size 2376 KEGG ko ko:K19496,ko:K20826 KEGG TC 1.A.17.1.1,1.A.17.1.22 Hectar predicted targeting category other localisation GOs GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0030154,GO:0030880,GO:0032502,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048869,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 Exons 7 EggNOG free text desc. transcription by RNA polymerase II EggNOG OGs KOG4732@1,KOG4732@2759 Ec32 ortholog description RNA polymerase II-associated protein 1, C-terminal Ec32 ortholog Ec-10_002060.1 Cds size 2373 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko03021,ko04040
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842628.8568232-UTR-E_fasciculatus_S2_contig9851:433..436 1696842628.8568232-UTR-E_fasciculatus_S2_contig9851:433..436 Ectocarpus fasciculatus EfasUO2 UTR E_fasciculatus_S2_contig9851 434..436 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842628.8689613-CDS-E_fasciculatus_S2_contig9851:436..721 1696842628.8689613-CDS-E_fasciculatus_S2_contig9851:436..721 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 437..721 + 1696842628.8904727-CDS-E_fasciculatus_S2_contig9851:1612..1881 1696842628.8904727-CDS-E_fasciculatus_S2_contig9851:1612..1881 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 1613..1881 + 1696842628.9118323-CDS-E_fasciculatus_S2_contig9851:2349..2968 1696842628.9118323-CDS-E_fasciculatus_S2_contig9851:2349..2968 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 2350..2968 + 1696842628.9280176-CDS-E_fasciculatus_S2_contig9851:3173..3770 1696842628.9280176-CDS-E_fasciculatus_S2_contig9851:3173..3770 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 3174..3770 + 1696842628.9371965-CDS-E_fasciculatus_S2_contig9851:4225..4411 1696842628.9371965-CDS-E_fasciculatus_S2_contig9851:4225..4411 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 4226..4411 + 1696842628.9464915-CDS-E_fasciculatus_S2_contig9851:4705..4879 1696842628.9464915-CDS-E_fasciculatus_S2_contig9851:4705..4879 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 4706..4879 + 1696842628.9575844-CDS-E_fasciculatus_S2_contig9851:5381..5624 1696842628.9575844-CDS-E_fasciculatus_S2_contig9851:5381..5624 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9851 5382..5624 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9851.17859.1
>prot_E_fasciculatus_S2_contig9851.17859.1 ID=prot_E_fasciculatus_S2_contig9851.17859.1|Name=mRNA_E_fasciculatus_S2_contig9851.17859.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=791bp
MALLPKMVSVMKSYAGQRAADGAQAASNGGSGGLGDKGGFHGAARATAAA back to top mRNA from alignment at E_fasciculatus_S2_contig9851:434..5624+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9851.17859.1 ID=mRNA_E_fasciculatus_S2_contig9851.17859.1|Name=mRNA_E_fasciculatus_S2_contig9851.17859.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5191bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9851:434..5624+ (Ectocarpus fasciculatus EfasUO2)AAG ATGGCGCTGCTACCAAAGATGGTGAGCGTGATGAAGAGTTACGCGGG
CCAACGCGCTGCCGATGGTGCTCAGGCTGCTTCCAACGGCGGAAGCGGCG
GCCTTGGGGATAAGGGCGGCTTTCATGGGGCGGCAAGGGCAACGGCAGCG
GCGGCTTCGGCGGCGGTTTCGTTCCAGCCGCGGGCGGCGCTGTCCTGCCT
GAGGGTGCTGTGCGCGGTGGGGGGGAGGGCTCCCTGGGCCGCGGAGAGGG
TGGCGAGCGAGCCCGGCCTGCTTGACGCCGTGCGTGAG GTGTGTATGTAG
TGCGTCGTGTTTGTGTGTGGAATGTTCACATGTGCTTGGGTACGTGTTTT
TTTGTGTGTGATGAGACAGACAACCCGACGGTTTTTGCAAGCGTTGTGTT
TTTTTTGGGATAAAAAGAGTCGAGGGTGTGCGTGTGTGTGTGTGGTGCGC
CTTTATGACCGAATGGGAGACGTACTGCAACCGCTCGCTTTCGAGAGATG
GTCATCCCGTTTTTTATGGGTTGGTTGTGCAGGGCTTGCAAGGCTGCACT
GTGGCCGCGCTTTCGCCCACGGCACAGGCGGCAAGCGCAGCACGTGCACA
ACTCGAGTTATTCATGTTCCAAGACCTTGTGCCTTGAAGCAAATGCCGCC
CGGGAGATGTGGGTACGGTGTGATTTCTACCGTACACAGGGTATACACGT
CGTGCATTTCCCGGGCGTGGCCTTTTCGACTGTCGCTGCAAATGCAAGCG
TGACGGTTGCATAGAACATCCCCCTTTCGCCTTACACGCGTGTATTAGTG
TTCCGAGCTGCAGGTTGTTGTCGGTGTGTCTACGGGCCGAGAGTTTTTCG
CAAGCTTCCCACGATAGCGTGTGTGTTCACGTGGATGTGGAATTAGCTTG
GAAAGAACCAGGGCTAAAACCCGTGTGATGCTTAGGTGCTTCAGAGCGGT
GTGTTGCGTAAACGTATCCCGCCATGAGCACGAGCCAATGCTTTGCCTTT
CTGCGGTGGTGAGGAACGACGGACAGTGCAGCCAGATCGCCACCATTTTG
CAAGTCATCGCCGCCACACTCGAGTTCTCGCCCTCATGCTTGCATTTCAC
CACCAACAACAATTGCACCACCACCACCAACACCAACACCAGCAACGGCT
ACCATTGTTGTAACTGCTATGTATTACAGGCGTTCTTGGAGCCGAGGGCT
GACGGCACGCTCCCGTTCGACCTGTCTGAAACGGCAACTACGACACCGCC
ATCACAAGAATCAGCAACATCTGCAAGGGTCGAGGGAAAGGCAAGGAGGG
GAAGGGCAGGGGGCCCAACCGGGAGCCCGCCGCCACCGCAAGAGCAATTG
GCGCTGCTGGCCGTTAGGCTGGCGAAAGTCTTGGTGCAGAGCGGGCGCGG
AGTTGCTCTGGCTCTGTCGCGCACGCCCCTGCTGGGGTCGACGAAGGG GT
GAGATAATTTTTTTTTGTGTTTTTGCGAGCAATGTTTTTTGCCTTCAAGG
ACGAGAGCGCTGTAGTTGTTGTTGTTGTTATTGTCGCGTTTGCGCACGGC
AAGGGTCGTATGTATTATCCCAAAAACTCCCGCGAGAGTTATTATGAAGT
GCATGTGGCATCAGTCACGACCCCTTATACAATACCTGCACCGTTCACCA
ATTTCAGTGTTTCTTTCCATAACCCGCAGTCCGCTTGCGCATCGAGAGCC
GAAAGGCCACGCTGTTGTTCGCGTCGCGATGTCTATGTCTTGCGTACGTC
TTGTCCGTGTCTTGTCCCCGCTCTGTGTCAGTCTGTCCTCGACCGTCTCT
AACCCGCCCTCCCATATCCCAGCACCGACCACTGCGAAACTTTTCCGTCG
TCGCCGGAAGCAATCACAATCCACAAACTCGCCCCCACACCTGGATCGCC
CCGCGAAAAAACAAAGATGGCTTGCGCTGGGACAGGGCTCTCGGCGGACC
CTCCCAGCGCTCGAGGCGGTGCAGCGCGAGGTCCTAGAGCTGTGGCGCTG
CTGCCTGTCCTACGGCATCGACGTCGCCGCCGCGGACACGGTTGTTCTCG
TGGCCCGCGGGCAGGGGTGGTGGCCGGGTCTCAGCGGTGGCGTCGGCGAC
GGCGCCGCCGCCGCTCCTCCTGTGGCCGATGCCGTCATCGTTGAACGCGG
CGGCGGCGGCGGCGGCGGGGGTGGTAGCGGTGGAAGTGGCGGCGATTCTT
TGCCGCCAAGGCTGGCGTTCTACCGCGCCCTGCACCAGCTCGCGTGCGCG
TGCGTCCTCCCGCCCGGAGGCGACGCCGCCGGCAGGAATGAGAACAACGA
TGCCGAGACCACCGGCGGCGGCGGTGGCAAGGCGGGCGTTGGAGCAGCGG
GGGCGGGGGCACGGGAAGAGACCGAGAGTTTCTCTGTCGGGGGCGTTGCG
GTTGTGCCCGAGTCCTGGGCGGACGTCGGCGACACCGTCGACGCGGCGGT
TGAGGCTGCTCTCCTCTGGCTCTTGAGCGGCGCCCGCGGCGGAGGCGGCG
GTGTGGGCGGAGGGACTCCAGAGACGGCTCAGCAG GTGAGCGTCCGCTGT
ACCGCATGGTTTTTCGGTGGTGTACCTTGTCTTTTCCTGCGTTGACTGCC
TTGGGTTCCCGCTCTCCCGCTTCAAGGAAGAATTGAGCGACATACACCCC
AAAGCGTAACGATCGTCCGTGTTTCTCCCTCCCCCCCCCGTTCCAATCGA
AATAATCGTATCGGTTGTAAACCACCCCCGAAACGAACAGGCCGCCGCCG
TCCACCTGGTAGCCTGTTGGGTGGAGCGGTACCAGGCCATGTCCCGCACG
GCCGGGAGGCGTGCGTCCCGCCACCTGGAGTCAACCGTGGAGGATGCGGC
CGTGTTGTTTTCGTCCCTCCTGGCCTCCCCCGCCCTGCCGCTACCAGCGG
CGGTGGCGGCAGCGGCGGCCGTTCATCGCGGCGGCGATCAACCCGGCGGG
GGCGGCAGCGGCGGTGACGACAGCTTCAGCCAGAGAGGGGTCAGCAGTAG
CGAGGCCGCGGCGGCGGCGGCGGCGGCGGGGCTCGACTGGCTCTCCGGCG
TGTTTCGGCTCGGCCTGGCGTGCGAGAGGGCGGTGCCCGGGGAGGCGGCG
GCGGCCCTGGCTTCCGCTCCGGAGGCAACGGCCGCGGCCCTCGCGGCCTT
CCTCACCACCGCCGGTACCACCTCCGCCGCTATCGCGTCGCCCCCCGCAG
CATTTTTGAGAAGGGTGCGGCGTGCTGACGCGGGTGCGAGGTGGCTCGGG
TGCAGGCTGCTGGCGCTTGGTTGTCGGGGTGGTGTTCGGGGGGCTGGATG
GCCGTGGGCGGCGTTGAGGAGGGACTGCGCTCTGCAG GTACGTGCGCGTG
AGGTTGTGGGTCTGGTAGCTTAATGCACAGCCGGTTGTTGTTGCGTTCGG
TTGCTGTACGTTTCCGCTAGTTTCACGTAAACGGTCTTGTTCTCTGTGAC
TCGGTTCTGATTCCGTGGGCCGTTCGTTTGTTTATACCCCACAAAGAAAT
ACAAACTTCGGGCAACCGTCAGCTTTTCTTTTTCGCCAACATGGTGTGCA
CACCTATCCTTTTTCTTGTGTGTTTTGCCAAACAGTAAGCAACACGCTGT
GTGCTCGTTCGGTCGTTTTCGACAGACCTAGGGACACCTGGTTTTTCCCC
TCGCGGACTTTTTCGGTTGCTGCCGACGTTGCTTTGACGGTCCGTCCTAT
GGTTGCAACACCGCCCTCCGTCTCTTGTTTTCTCCTTGTGACCCCCTTCT
TTGACATTTTTTCGATTTCTGGTGTTGTCGCCCTTTCCGCAGGCGATGGC
GCTCTGCGAGCGCGGCGACGAAGCGATCGCCGTGGGGCTGCTGGCGGAGG
CGTTGCCTGGCAGTACCGTGGACAGTCCCGCGGAGGAGGGATCGAAGAGG
CCCAACGGCGATCCTGCCGCCGCCGCTTCCGCCGCCACCGCCGGCACGGC
TGGCGCTTCTGCGTCGCTTCTGCGAACG GTGACTGAACATGAAGTCGTGT
CGATTTGTTGTTGGGGTTACGATTTCACCAGCGGGGGTGTCTAACCCGAG
CTTAGTGTTGCTGTCGTTGTCGATATCGTGGGAAGCTGTGCCCTCCCTCA
CCACGTTTGAAGAAACGTTACACCGTTCAGTGACCTCTCAGCGATAGGCC
TCAGATTGGACTCACGTGTTTCCCAGAACGCAAGCAGCTGAAAAAAGAAC
TCGACTAGAAACCAGTAGCTTCGCGTCTGTAACTCGCAAGATGCTTGCCT
CCTTGCCACCCCCTCGCTGCAGCTCTTCCGTGGTGCCATCAGCGACCCGG
TGGCCCTGTCCCAATCCTCCTTCCACCTGGACGGGCGATGGGCGTCCCTT
CAGAGCCTGAAGGCGTGCGCGCCCCCGGGGACGGCCTCTCTCCTCCCCCT
GCCCCCGCACTGGCTGTTTCTTCCTTTGGCCAGCCAGGCAAGTTTC GTTT
GTTGCCACACCCGCCGGAAATGACTTGCTTCTCTTGCCGAGATTTCTGTC
TTTGCTCTCGGGGAGTCTCGCTGCGGTTGCTGAAAGGTTTCGGACACCAC
TTTGTCGCCTATGTTGTCTTCCGTTTTTCGTGAGTCCGATTTTCGTGAGA
GAACCTCTTATGGCCGGCGTGCCAACGCGATGACCACAGAGCAGAACGAT
AGGGGGTGCGGCGAGTGTTTGTCGGCGTCATAGTAACGGGCAGGCCCTGC
CCTCTTTCGACTCATAGGAGATCACTCTCTGTCTCTCCCTCTTTCGACTT
AGAGGAGATCACTCTCTCTCTCTCCCCCTCTCCCCATACTATACCCTCTT
TGCCGGTCTGGCTGCTTTGAGTCCCCGTGTTGCGTATCATGATCCCCGCT
TGCATTCCAAGTACCACCGTGTTCCACCATTCCGCTTCTTGCCCAATATC
CACGAACACGCACGACTGCCTTGTCGCAACGAAAACCACCCTGGGCAGGG
CGGGGGAAAAGCTGCAGCCACAGCGGTGTCGGCTTGCCTCTCGCTGCTGG
TCCAACTTGAGCGAGAGGAGAGCGCCTACGTGTGGGGCGGCGGCGGCGGC
GGCCGCGGCGGCCGCGGCGGAACCGGTTGCGTTTCACCCGAGGTGAAGCT
GTACCATCTGGCCAACGCGTGCCTGTACGGTGCCTCGGTGCTGTCCGGAC
TTGGGGCGGTCCAGAACTTCGACTGGTTGTTCGGCAGGTAT back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9851:434..5624+
>mRNA_E_fasciculatus_S2_contig9851.17859.1 ID=mRNA_E_fasciculatus_S2_contig9851.17859.1|Name=mRNA_E_fasciculatus_S2_contig9851.17859.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2373bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9851:434..5624+ (Ectocarpus fasciculatus EfasUO2) back to top