mRNA_E_fasciculatus_S2_contig9844.17850.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 195 bits (496), Expect = 8.390e-54 Identity = 105/151 (69.54%), Postives = 115/151 (76.16%), Query Frame = 3
Query: 78 QTRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDLDIPIENV 530
+TR LDAFV+ALSQAC+GG KRWYASTLEL+LTSLD+CRACR+ SIL V V QTP S W R QTRP+TRS L +SSRVPVVRALRLTW LS E LLR AA ELW SE L L G +SLGS V WPRGLTQLVLYTD DI + V
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTV 158
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.540e-51 Identity = 96/149 (64.43%), Postives = 108/149 (72.48%), Query Frame = 3
Query: 81 TRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDLDIPIEN 527
TR DAF +ALSQAC+GG KRWY ST EL+L SLD+CRACRS L VRV+ TP S W P Q P+T+SSK+ V SRVPVVRALRLTW S ETL++ AA ELW SE L + GPL AASLGS VW P GLTQLVL TD IP+E
Sbjct: 7 TRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVW-PLGLTQLVLDTDFHIPMEK 154
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.880e-30 Identity = 73/145 (50.34%), Postives = 94/145 (64.83%), Query Frame = 3
Query: 81 TRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDLDI 515
++ LDAFVVAL+QAC G KRWY STLEL+L SL++C ACR + L VRV QTP S WFP T + RS K+ +SSRVPVV+A LTW L L + +ATE+ S C + AASL SAVW P+ L ++V +D+ +
Sbjct: 7 SKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVW-PQRLKRMVFESDMTV 150
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 120 bits (300), Expect = 2.670e-27 Identity = 68/140 (48.57%), Postives = 84/140 (60.00%), Query Frame = 3
Query: 90 LDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDL 509
L AF+VAL+Q C G KRWYASTLEL+L SL+ C ACR + L VRV QTP S W P + RS + VS+RVP V+A LTW L E LL+T+A EL S+ + G ASLGS W L +LV +D+
Sbjct: 18 LRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDM 157
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.290e-26 Identity = 73/150 (48.67%), Postives = 95/150 (63.33%), Query Frame = 3
Query: 78 QTRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVL-YTDLDIPIE 524
Q R LDAFVVALSQ +GG KRWY STL+L+L SL+ C ACRS +L V V ++TP + W + Q P+ G S+RVP V+A+ LTW TE+ L +A++ELW E L L L A+L S VW P+GL +LV+ T IP+E
Sbjct: 6 QRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW--SLGQANPTA-----GTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVW-PQGLQRLVMDCTVFIIPLE 147
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 111 bits (278), Expect = 2.090e-25 Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 3
Query: 90 LDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLV 494
LD +VAL+QAC G KRWY STLEL+L SL++C ACRS +L V V TP + W R ++T PS RS ++ S+RVP V+AL TW L + L + AA E +E DG AAS+ S VW P L +LV
Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVW-PESLKRLV 223
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 116 bits (290), Expect = 2.670e-25 Identity = 74/175 (42.29%), Postives = 91/175 (52.00%), Query Frame = 3
Query: 81 TRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLG----------------------------VSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDLDIPI 521
+R DA ++A+SQA +G KRWY STLEL+L SL+ CRACR + + VRV + TP S W P TR TRSSK +SSRVPV +AL LTW L TE LL+ A ELW E L L L + L S V WP+ L +L L T + I
Sbjct: 7 SRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVS-VAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 103 bits (257), Expect = 6.360e-24 Identity = 56/84 (66.67%), Postives = 61/84 (72.62%), Query Frame = 3
Query: 81 TRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVV 332
T+ DAFVVALSQAC+GG KR Y STLEL L SLD+CRA RS S L VRV QTP SFW P Q RP SSK+ +SSRVPVV
Sbjct: 20 TQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 110 bits (274), Expect = 4.610e-23 Identity = 66/149 (44.30%), Postives = 85/149 (57.05%), Query Frame = 3
Query: 69 GTRQTRYLDAFVVALSQACKGGRKRWYASTLELKLTSLDMCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDLDI 515
G ++ LDAF+VAL QA G KRWY STLEL+L SL+ C ACRS DV++ QTP S W PR + RS + + SRVP V+A W L E LL +ATEL SE GP A S G W+ + LT+L+ Y++ +
Sbjct: 23 GLGRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQK-LTRLMFYSERSV 170
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.320e-20 Identity = 64/113 (56.64%), Postives = 67/113 (59.29%), Query Frame = 3
Query: 192 RACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRALRLTWTLSTETLLRTAATELWMSSECLWLDGPLGAASLGSAVWWPRGLTQLVLYTDLDIPIENV 530
RACRS SIL TRP+T S + VS R P V AL LTW L E+LLRTAA ELW SECL L G L AASL SA WWPR LTQLVL DLDI ENV
Sbjct: 1086 RACRSTSIL------------------HTRPNTSKSAVPVSGRAPAVWALHLTWALPMESLLRTAAIELWTWSECLELQGSLCAASLRSANWWPRRLTQLVLKADLDILTENV 1180 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9844.17850.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9844.17850.1 >prot_E_fasciculatus_S2_contig9844.17850.1 ID=prot_E_fasciculatus_S2_contig9844.17850.1|Name=mRNA_E_fasciculatus_S2_contig9844.17850.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=227bp MCRACRSISILDVRVSSQTPGSFWFPRITQTRPSTRSSKLGVSSRVPVVRback to top mRNA from alignment at E_fasciculatus_S2_contig9844:706..2098+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9844.17850.1 ID=mRNA_E_fasciculatus_S2_contig9844.17850.1|Name=mRNA_E_fasciculatus_S2_contig9844.17850.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1393bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9844:706..2098+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9844:706..2098+ >mRNA_E_fasciculatus_S2_contig9844.17850.1 ID=mRNA_E_fasciculatus_S2_contig9844.17850.1|Name=mRNA_E_fasciculatus_S2_contig9844.17850.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=681bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9844:706..2098+ (Ectocarpus fasciculatus EfasUO2)back to top |