Homology
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)
HSP 1 Score: 84.3 bits (207), Expect = 1.400e-18
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1
Query: 13 KLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
+LVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRK M
Sbjct: 47 ELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAM 90
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: UPF0559 (protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAW8_POLPP)
HSP 1 Score: 60.8 bits (146), Expect = 1.010e-9
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 1 TDGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
+D KLVMNYLV+EGY++AA+ F +ESGT + VDL TIE+R+AIR +
Sbjct: 56 SDLNKLVMNYLVIEGYKEAADMFQKESGTKSSVDLHTIEDRMAIRSAI 103
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Tenascin (X n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A818_9MYCE)
HSP 1 Score: 59.3 bits (142), Expect = 5.330e-9
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 1 TDGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
+D KLVMNYLV+EGY++AAE F +ESGT + VDL +I +R+AIR +
Sbjct: 705 SDLNKLVMNYLVIEGYQEAAEKFQQESGTQSMVDLNSIADRMAIRSAI 752
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Uncharacterized (protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WCM2_9FUNG)
HSP 1 Score: 58.5 bits (140), Expect = 5.700e-9
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1 TDGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIR 135
+D +L+MNYL++EGY+DAAE F EESG +VDL +IEER+ IR
Sbjct: 29 SDLNQLIMNYLIIEGYKDAAEKFSEESGLQTQVDLGSIEERMQIR 73
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: LisH (dimerization motif n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QRU0_9MAGN)
HSP 1 Score: 58.9 bits (141), Expect = 6.440e-9
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 4 DGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
D KLVMNYLV EGY +AAE F ESGT+ VDL TI ER+A++K +
Sbjct: 109 DMNKLVMNYLVTEGYVEAAERFKMESGTEPHVDLATITERMAVKKAL 155
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Phosphatidylserine (decarboxylase proenzyme 1, mitochondrial n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507F2M4_9FUNG)
HSP 1 Score: 58.9 bits (141), Expect = 7.280e-9
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 4 DGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIR 135
D KL+MNYLV+EGY+DA E F EESG VDL +IEER+ IR
Sbjct: 396 DLNKLIMNYLVIEGYKDAVEKFAEESGLSPNVDLDSIEERMKIR 439
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: LisH (and RanBPM domains containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MIU6_ARTAN)
HSP 1 Score: 58.2 bits (139), Expect = 7.790e-9
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 4 DGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
D KLVMN+LV EGY DAAE F +ESGT+ ++DL TI +R+A++K +
Sbjct: 27 DMNKLVMNFLVTEGYVDAAEKFRKESGTEPEIDLATITDRMAVKKAV 73
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HES9_9EUKA)
HSP 1 Score: 58.5 bits (140), Expect = 8.980e-9
Identity = 26/44 (59.09%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 13 KLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
+LVMN+LV+EGY++AA+ F+ ESGTDA VDL T+ +R+AIR +
Sbjct: 49 RLVMNWLVIEGYQEAAQRFMAESGTDAGVDLDTVSDRMAIRNAV 92
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Uncharacterized (protein n=2 Tax=Quercus TaxID=3511 RepID=A0A7N2LNJ6_QUELO)
HSP 1 Score: 55.8 bits (133), Expect = 9.880e-9
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 4 DGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
D KLVMN+LV EGY DAAE F ESGT+ +DL TI +R+A++K +
Sbjct: 42 DMNKLVMNFLVTEGYVDAAEKFRLESGTEPDIDLATITDRMAVKKAV 88
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Match: Uncharacterized (protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6B0_9FUNG)
HSP 1 Score: 57.8 bits (138), Expect = 1.050e-8
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 4 DGRKLVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM 144
D KLVMNYLV+EGY+DAAE F +E G +DLT+IE+R+ IR +
Sbjct: 28 DLNKLVMNYLVIEGYKDAAEKFSQECGLSPNIDLTSIEDRMNIRNAV 74
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9827.17832.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.40e-18 / Id = 95.45 Expect = 1.01e-9 / Id = 60.42 Expect = 5.33e-9 / Id = 58.33 Expect = 5.70e-9 / Id = 60.00 Expect = 6.44e-9 / Id = 61.70 Expect = 7.28e-9 / Id = 63.64 Expect = 7.79e-9 / Id = 57.45 Expect = 8.98e-9 / Id = 59.09 Expect = 9.88e-9 / Id = 57.45 Expect = 1.05e-8 / Id = 57.45 Sequence Uncharacterized UPF0559 Tenascin Uncharacterized LisH Phosphatidylserine LisH Hypothetical Uncharacterized Uncharacterized
Match Name E-value Identity Description
Uncharacterized 1.400e-18 95.45 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more] UPF0559 1.010e-9 60.42 protein n=1 Tax=Polysphondylium pallidum (strain A... [more] Tenascin 5.330e-9 58.33 X n=1 Tax=Tieghemostelium lacteum TaxID=361077 Rep... [more] Uncharacterized 5.700e-9 60.00 protein n=1 Tax=Linderina pennispora TaxID=61395 R... [more] LisH 6.440e-9 61.70 dimerization motif n=1 Tax=Macleaya cordata TaxID=... [more] Phosphatidylserine 7.280e-9 63.64 decarboxylase proenzyme 1, mitochondrial n=1 Tax=C... [more] LisH 7.790e-9 57.45 and RanBPM domains containing protein n=1 Tax=Arte... [more] Hypothetical 8.980e-9 59.09 protein n=1 Tax=Phaeocystis antarctica TaxID=33657... [more] Uncharacterized 9.880e-9 57.45 protein n=2 Tax=Quercus TaxID=3511 RepID=A0A7N2LNJ... [more] Uncharacterized 1.050e-8 57.45 protein n=2 Tax=Basidiobolus meristosporus CBS 931... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 81.3 Seed ortholog evalue 1.2e-13 Seed eggNOG ortholog 2880.D7G2A7 Preferred name GID8 Model size 147 Hectar predicted targeting category no signal peptide or anchor GOs GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010564,GO:0010675,GO:0010677,GO:0010906,GO:0019222,GO:0019538,GO:0019941,GO:0030054,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045721,GO:0045787,GO:0045912,GO:0045931,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0051726,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090068,GO:1900087,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:2000045 Exons 1 EggNOG free text desc. negative regulation of gluconeogenesis EggNOG OGs KOG2659@1,KOG2659@2759 Cds size 126 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842626.4427302-CDS-E_fasciculatus_S2_contig9827:303..429 1696842626.4427302-CDS-E_fasciculatus_S2_contig9827:303..429 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9827 304..429 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842626.455223-UTR-E_fasciculatus_S2_contig9827:429..450 1696842626.455223-UTR-E_fasciculatus_S2_contig9827:429..450 Ectocarpus fasciculatus EfasUO2 UTR E_fasciculatus_S2_contig9827 430..450 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9827.17832.1
>prot_E_fasciculatus_S2_contig9827.17832.1 ID=prot_E_fasciculatus_S2_contig9827.17832.1|Name=mRNA_E_fasciculatus_S2_contig9827.17832.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=42bp
MNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKVM* back to top mRNA from alignment at E_fasciculatus_S2_contig9827:304..450-
Legend: UTR CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9827.17832.1 ID=mRNA_E_fasciculatus_S2_contig9827.17832.1|Name=mRNA_E_fasciculatus_S2_contig9827.17832.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=147bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9827:304..450- (Ectocarpus fasciculatus EfasUO2)ACGGACGGACGGAAGCTGGTG ATGAACTACCTGGTCGTGGAGGGCTACCG
GGATGCCGCGGAGCACTTCGTGGAAGAGTCCGGGACGGACGCCAAGGTGG
ACCTCACCACCATTGAGGAAAGGGTGGCGATAAGGAAGGTGATGTGA back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9827:304..450-
>mRNA_E_fasciculatus_S2_contig9827.17832.1 ID=mRNA_E_fasciculatus_S2_contig9827.17832.1|Name=mRNA_E_fasciculatus_S2_contig9827.17832.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=126bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9827:304..450- (Ectocarpus fasciculatus EfasUO2) back to top