mRNA_E_fasciculatus_S2_contig9822.17829.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9822.17829.1
Unique NamemRNA_E_fasciculatus_S2_contig9822.17829.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI)

HSP 1 Score: 565 bits (1455), Expect = 6.630e-201
Identity = 295/300 (98.33%), Postives = 295/300 (98.33%), Query Frame = 1
Query:   37 SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDMDEXXXXXXXXGQDGRHTMEE 936
            SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD   XXXXXXXX  DGRHTMEE
Sbjct:  109 SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDXXXXXXXXXXXXXDGRHTMEE 408          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 5.860e-165
Identity = 239/257 (93.00%), Postives = 245/257 (95.33%), Query Frame = 1
Query:   37 SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQI 807
            SDEVIFSCRLDNA+SITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFG GSLAQTSVSMAYQEARATFRLTLE GGVFTSCEIRTIHQDEEAM+FSTLAKAFGRSKEVCRCILK E    AFQELADLNGATSVSVTFGQEA HLQL AKGSNGSSEIDFPKSS++ VCFECTAR VSW +LMTGMETGMRALGHANETYFRVNEEGILCIQHQ+
Sbjct:   30 SDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGRGSLAQTSVSMAYQEARATFRLTLEGGGVFTSCEIRTIHQDEEAMKFSTLAKAFGRSKEVCRCILKGE----AFQELADLNGATSVSVTFGQEATHLQLYAKGSNGSSEIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Repair (protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA)

HSP 1 Score: 324 bits (831), Expect = 5.020e-107
Identity = 160/278 (57.55%), Postives = 208/278 (74.82%), Query Frame = 1
Query:   49 IFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDMD 879
            +FSCR+DNA+++TT+LSCLSHG+RK Q AQCE T E +T V++G+AK+TQAQG+L   LFQ Y+C E G +FGINL+ LLECLQIFG    A  S ++AY    ATF++TLEE GVFTSCE+RT+ ++ +AMEF+ LA AF  S E CRCI++SE LKEAFQELADL GA S+     Q APHL+LS  GS GSS I FP+SSEAFV F CT   + W+Y ++ +E GMRAL  A ET+ R+NEEGI+CIQHQ+ ++ G  ++VD L+C +  ++D D
Sbjct:   35 LFSCRIDNARAVTTVLSCLSHGSRKAQHAQCEATPEGLTFVITGKAKFTQAQGALSKDLFQAYECEEDGGRFGINLSMLLECLQIFGMN--ASASAALAYYPGTATFKVTLEENGVFTSCELRTLVEESDAMEFAALAAAFRSSPEECRCIIRSETLKEAFQELADLPGAASIVFEASQHAPHLKLSTSGSYGSSSIQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLICANTADIDDD 309          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ4_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 4.420e-106
Identity = 174/215 (80.93%), Postives = 180/215 (83.72%), Query Frame = 1
Query:   37 SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECT 681
            SDEVIFSCRLDNA+SITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQE+          G      E++  +   EAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEA HLQLSAKGSNGS     P SS       C+
Sbjct:   30 SDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQESDVPPHPGRGRG----VHELQDKNHPPEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEATHLQLSAKGSNGSRYAMAPPSSHGAPGSRCS 240          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA)

HSP 1 Score: 261 bits (668), Expect = 6.230e-83
Identity = 136/271 (50.18%), Postives = 183/271 (67.53%), Query Frame = 1
Query:   40 DEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCV-EGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMG-QTSFVDVL 846
            +E +FSCR+D+ K IT  L+CLS G+RKDQ AQ EV  E +  +V+GRAK+TQ+QG+ + +LFQ + C  EG  F I+L  LLECLQ+FG  SL  T ++M+Y+  +A  RLTLEE GV T+CE+R +   E+A + + LA AF    EV R ILKS++LKEA  EL+DL GA SV V+     P+  L+  G  G  EI  PKSSEAFV F+C+  R SW+Y +  +  GMRAL  A ETY R+NEEGI+C+QHQ+  +   Q++F+D L
Sbjct:   14 EEPLFSCRIDSTKIITATLACLSDGSRKDQLAQVEVNNEGIVFIVTGRAKFTQSQGTFNRALFQAFQCQPEGGSFTIDLHLLLECLQVFGAASLTNTMLTMSYEPRKAALRLTLEEQGVLTTCEVRALEAGEDAFDLAALASAFRSRPEVLRAILKSDVLKEAISELSDLPGAGSVRVSVAPHEPNFHLATNGICGGLEIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFL 283          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI5_9STRA)

HSP 1 Score: 238 bits (608), Expect = 8.160e-74
Identity = 128/278 (46.04%), Postives = 181/278 (65.11%), Query Frame = 1
Query:   49 IFSCRLDNAKSITTILSCLSHGT-RKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIH---QDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCP-DIQE 867
            +FSCRL++AK +  ++SCL+H   RK+  A C+V  + +   ++ RAK  Q  G+L   +F  ++C E   F +NL  +L+CL +FGP +++ T+++M Y +  A F+LT+EE GVFT C+I+T+    QDE+  EFS L  +F R  E C+ ILKSE LKEA  EL DL+GA+ V V     APH QL+A G+ G+ EI+FPKSSE FV F C+   + +TY +  +  GMRAL  A ET  R+N  GI+CIQHQ+    G TSFVD L+CP D+Q+
Sbjct:   19 LFSCRLESAKELHALVSCLAHEKKRKEHIALCQVNDQGLNFSMNQRAKTIQVSGTLPRRVFSSFECHEHGAFCLNLGMVLDCLSLFGPAAISSTAIAMTYSKEDAVFQLTMEEHGVFTRCDIQTLDGSAQDED--EFSQLTSSFRRDPEACKLILKSEFLKEALYELQDLSGASFVDVFISPTAPHFQLAATGNLGTLEIEFPKSSELFVLFSCS-EALRFTYRLEALIRGMRALLVAAETCVRINVVGIMCIQHQVQNHSGVTSFVDFLMCPADLQD 293          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.130e-63
Identity = 112/268 (41.79%), Postives = 161/268 (60.07%), Query Frame = 1
Query:   82 ITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GAKFGINLTTLLECLQIFGPGSLAQTS--VSMAYQEARATFRLTLEEGGVFTSCEIRTIHQD---EEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQE 867
            I ++L C+ +GTRKDQ AQC+V    ++  +  R++ TQ  G++D + F E++C + G  F IN+ TLL+CL IFGP      S  V+M++ +      L L+E GVFT C+I+ I  D   E    F+  +  F +    C+CI+KSE LKEA  EL DLN AT +SV    +APH Q+SA+GS G  +I+FP+SS+ F  FECT   +   Y       GMRAL  + E+YFR+NE G+LCIQH +    G   F+D ++ P+I +
Sbjct:    1 IQSMLQCIVNGTRKDQHAQCQVHAGGISFSLQSRSRTTQVTGTMDKNCFTEFECYDDGGTFCINICTLLDCLSIFGPQQAGTNSTVVTMSFDKNLCQLILNLDEDGVFTRCDIQAIENDGDEEVGARFAQFSDEFRQKPSPCKCIVKSEQLKEALNELRDLNNATRLSVLLSPQAPHFQISAQGSLGFLDIEFPRSSDLFELFECT-ETMKTEYDYDSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPNIAD 267          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.690e-46
Identity = 88/222 (39.64%), Postives = 135/222 (60.81%), Query Frame = 1
Query:  205 GSLDSSLFQ---EYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDI 861
            G  D  +F+   E+D  E  +  INLTT ++CL +FG  SL  T+ ++ Y    A  +L+LE+ G+ T+C+I T++ D        L  AF  S E+C+ ILKSEILKEA  +L+D+ GAT+V++   +   +L     G+ G  EI+FP+ S+ FV F C  +   WTY +T ++ GM+AL  + ET+ R+NEEG++CIQHQI  + G   ++D L+  D+
Sbjct:    5 GYFDDYIFKPINEHDNDERIRIFINLTTFVDCLLLFG-SSLETTAGTITYNSDDALLKLSLEDSGILTTCDISTLYMDNNEDIGYELFSAFLSSNELCQVILKSEILKEAMHDLSDVYGATTVAIEITKNPENLTFMTVGTMGECEIEFPRLSDLFVSFRCD-KSSKWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSDV 224          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL)

HSP 1 Score: 158 bits (399), Expect = 3.600e-42
Identity = 99/304 (32.57%), Postives = 155/304 (50.99%), Query Frame = 1
Query:   40 DEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQ--EYDCVEGAK----------------FGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTF-----GQEAPH--LQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVS------WTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 858
            ++ +  C  ++ K + T+LSCL  G +KDQ+ +C++    M      + K  Q + SL S LF   E+   E ++                F +NL+ L+E L +FGP SL  +S+ ++Y    A   L +E+ GV   C ++ +  +   +       AF +S  + RCI++SE L +AF EL DL  A SV++       G  + H  L LSA    GS EI+F +SS AF+ F CT    S       T+ +  ++   +ALGH+NET+ R+N +G L +QH I    G  +FVD L+ P+
Sbjct:   42 EKPVLVCTSESVKLLVTLLSCLFQG-KKDQRIRCDIDSAGMLFTSHSKGKSLQIKTSLGSELFDTFEFRASETSQLDHDDEDDSQLDTQYSFALNLSALIESLSMFGPASLPTSSLRLSYFAESARLTLLVEDNGVICECAMQVLELESNDIAQLEFESAFEQSAVIGRCIMQSEPLHDAFAELYDLPSAASVAIAMYEDDEGPASSHKCLSLSATSETGSCEIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344          
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C542_PYTIN)

HSP 1 Score: 147 bits (371), Expect = 1.440e-38
Identity = 95/295 (32.20%), Postives = 149/295 (50.51%), Query Frame = 1
Query:   82 ITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGA-------------KFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTF---GQE----APH------------LQLSAKGSNGSSEIDFPKSSEAFVCFECTA----RRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 858
            + T+LSCL  G +KDQ+ +C+V    M      R K  Q +  L + LF+ Y+  E                F +NL  L+E L +FG  +LA +S+ ++Y    AT  L +E+ GV   C ++ +  +   M       AF +S  + RCI++SE L++AF EL DL  A  V+++    G E    + H            L LSA+   GS EI+F +SS AF+ F C +       + T+ +  ++   +AL H+NET+ R+N +G L +QH I    G+ +FVD L+ P+
Sbjct:    1 MVTLLSCLFQG-KKDQRVRCDVDNAGMLFTAHSRGKSLQIKTXLGAXLFESYEFREPDDTNGDGDGLDTQHSFALNLNALIESLSMFGSSALATSSLRLSYFPQTATLTLVVEDNGVICECAMQVLELEGNDMSQLEFESAFEQSAVLGRCIIQSEPLQDAFAELYDLPSAACVTISMFPDGDENQIDSDHRRRSVAHAQGRCLSLSAQSETGSCEIEFARSSAAFIEFFCASSGDNEPCAATFHVAVLQQAFKALAHSNETFLRMNADGFLSVQHMIETGTGERAFVDALVSPE 294          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9822.17829.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.630e-20198.33protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.860e-16593.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Repair5.020e-10757.55protein Rad1/Rec1/Rad17-domain-containing protein ... [more]
Uncharacterized4.420e-10680.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.230e-8350.18protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Hypothetical8.160e-7446.04protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical8.130e-6341.79protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.690e-4639.64protein (Fragment) n=2 Tax=Chromulina nebulosa Tax... [more]
Uncharacterized3.600e-4232.57protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized1.440e-3832.20protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9822contigE_fasciculatus_S2_contig9822:947..5688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score568.2
Seed ortholog evalue2.4e-159
Seed eggNOG ortholog2880.D7FY66
Preferred nameRAD1
Model size939
KEGG koko:K02830,ko:K05665
KEGG TC3.A.1.208.8
KEGG Pathwayko01523,ko02010,ko04071,ko04111,ko04113,ko04218,ko04977,ko05206,map01523,map02010,map04071,map04111,map04113,map04218,map04977,map05206
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000076,GO:0000077,GO:0000228,GO:0000278,GO:0000280,GO:0000723,GO:0000785,GO:0000792,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004527,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006278,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007093,GO:0007095,GO:0007127,GO:0007131,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0008219,GO:0008408,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010389,GO:0010564,GO:0010639,GO:0010833,GO:0010948,GO:0010972,GO:0012501,GO:0016043,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0022402,GO:0022414,GO:0023052,GO:0030896,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0032200,GO:0032991,GO:0033043,GO:0033313,GO:0033314,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035825,GO:0035861,GO:0040020,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045786,GO:0045835,GO:0045930,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060249,GO:0061982,GO:0065007,GO:0065008,GO:0070013,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0090734,GO:0097159,GO:0097190,GO:0097193,GO:0104004,GO:0140013,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:1990421,GO:2000241,GO:2000242
Exons7
EggNOG free text desc.exodeoxyribonuclease III activity
EggNOG OGsKOG3194@1,KOG3194@2759
Ec32 ortholog descriptionRad1/Rec1/Rad17
Ec32 orthologEc-24_003630.1
EC3.1.11.2
Cds size939
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9822.17829.1prot_E_fasciculatus_S2_contig9822.17829.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9822 947..5688 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842626.2205248-CDS-E_fasciculatus_S2_contig9822:946..10811696842626.2205248-CDS-E_fasciculatus_S2_contig9822:946..1081Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 947..1081 -
1696842626.237954-CDS-E_fasciculatus_S2_contig9822:1966..21411696842626.237954-CDS-E_fasciculatus_S2_contig9822:1966..2141Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 1967..2141 -
1696842626.2478538-CDS-E_fasciculatus_S2_contig9822:3099..32091696842626.2478538-CDS-E_fasciculatus_S2_contig9822:3099..3209Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 3100..3209 -
1696842626.267779-CDS-E_fasciculatus_S2_contig9822:3737..38301696842626.267779-CDS-E_fasciculatus_S2_contig9822:3737..3830Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 3738..3830 -
1696842626.2855692-CDS-E_fasciculatus_S2_contig9822:4074..41491696842626.2855692-CDS-E_fasciculatus_S2_contig9822:4074..4149Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 4075..4149 -
1696842626.2963383-CDS-E_fasciculatus_S2_contig9822:4725..49321696842626.2963383-CDS-E_fasciculatus_S2_contig9822:4725..4932Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 4726..4932 -
1696842626.3065798-CDS-E_fasciculatus_S2_contig9822:5544..56881696842626.3065798-CDS-E_fasciculatus_S2_contig9822:5544..5688Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9822 5545..5688 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9822.17829.1

>prot_E_fasciculatus_S2_contig9822.17829.1 ID=prot_E_fasciculatus_S2_contig9822.17829.1|Name=mRNA_E_fasciculatus_S2_contig9822.17829.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=313bp
GGGGGGQEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVT
KESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQI
FGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFS
TLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQ
LSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHA
NETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDMDEQEEEEE
EEGQDGRHTMEE*
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mRNA from alignment at E_fasciculatus_S2_contig9822:947..5688-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9822.17829.1 ID=mRNA_E_fasciculatus_S2_contig9822.17829.1|Name=mRNA_E_fasciculatus_S2_contig9822.17829.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4742bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9822:947..5688- (Ectocarpus fasciculatus EfasUO2)
GGGGGGGGGGGGGGGGGGCAGGAGGAAGACGAGGAAAGCGACGAAGTCAT CTTCTCGTGCCGGCTGGACAACGCCAAGTCGATCACCACCATCCTCTCCT GCCTTAGCCACGGAACCCGCAAGGATCAGCAGGCCCAGTGCGAGGTGACC TTTTTTTTGTTTTCCTGTGAGCGAGGGAGTTTTGTCTGTGGGCTTCGGCA GACTGATTTTTTTCTTATCTTTGGTAGCTCAGCTCACATAACTTGCACAG AGGGTATGTGCTGTACGGGCCCGGCGATCCTCGCTTTTCGCCGCTTGCTC TGCAGAATATCGCCAAGTTTCATCCTCTGGAGTAGTAAGGCGGTGGTACG TTCACCTGAGCTTGATAGCGATGTTTTCGTGTCTCGGGCTACGGTTCCTG ACGCCAAACCATCGCGCTCCTCGTCGCGAGAGGAACAATTCTACAGGACC TACGGCCTCCTCGGACCTTGAGGGGGGGGTACATCACCCGCGCTTAAGGT CATCCCCACACGTCAAGGACTTGAAGATGGAGTGCTCCGAAGCGTACGGT CATTTCTTTGACTTGCCAGCTCTCCTCTTGATGTTGCCACAGTCGGGTTG TGATGATTTGTAATGTCGGGGGTGCTGGAACGAGATCTGAGTGTTTTGAA CTTGGTACACCACAACTTCGACTACAACAACAAACAACGCGACAGCAACC TACAAGGGCGATGTGCCATAACATAACCGAAGCAAACAACACAACAAAAT GTACAGGTGACGAAGGAGTCGATGACCCTCGTGGTTTCGGGAAGAGCCAA GTACACACAGGCGCAGGGGTCGCTAGACAGCAGCCTGTTCCAGGAGTACG ACTGCGTAGAGGGCGCCAAGTTCGGCATCAACCTCACCACGCTGCTGGAG TGCCTCCAGATCTTCGGCCCCGGGTCTCTCGCCCAGACGAGCGTCAGCAT GGCGTACCAGGAGGTATATTTTCAGTAGCCTGCGCGAGGATATCAAAAGC TTGGTATTTGGTAGTGGGGTTTGGGCTTGGTTTTCCATAGGGGGTTGGGG GCTAGAGGTACGGTTTCGAACCTCCCTCTCCATTTCGTGGAATGATCCCC AACCGTGGCGAAGGCGGTCCTACGAGCTTTGGAGTCGTGGATTGTTTTCG TTTTCCCCGTGCTGTTGAAAGAGGGGGAGGGGTCGTGACCGCGCATCTTC GTATTCTGCGGACAATCGATGCTTACGCGGCTGCGGATATTGGATGCTCG CACCCTGGCGCGAAGGCGTTGCTCAACTTGTCGGGCGCGTGCAGCGACCA GGCCGTCGTTTGCGCCGATTGCCAGTCGCCGTGATGCGCCCAGCGAAAGG GCGAGCCGCATGAATCCCACAATATCAGCTCCTGCTGGGGCGGGCGGAAT TGATTTCTTCACGCGTAATGCGGCGCGGGCCTACGGATAGAGCTCTCAAT CTCGTGAAAAAGCATTTCCTATGTGTGTCGTCCCGAGGACCAACGTCACC ATCACGCACTTTTGTTGGTCGTACGTTCTCCGCTGGAAGGCTAGAGCGAC GTTCCGCCTTACCCTGGAAGAGGGCGGGGTGTTCACGAGCTGCGAGATAA GGACCATCCACCAGGTACGGGTTGTAGGGTCAGTTTTGGCTTGCTCTCCA GACGCTTATTTAATCGAACGCCATGAGAGAGCTCCGCTGTTTCGGGCGTC CTTCCATTGTTATCCTGGCAACTGCAGCGTAACGTGCACAGCATCCTGCT TGCGTACCTTTCCTTCAAGTCTGTTTTTCTCGCGTCCTTCTCCGCGTGGC TTGCCTGAATTAATTTCTGTGTTGCCGTGTTTTGGTGCCATCGGTGATAC GCACGCAGGACGAGGAAGCCATGGAGTTCTCAACACTGGCCAAGGCGTTC GGCAGGAGCAAAGAGGTCTGCCGCTGCATCCTCAAGTCAGAAATTCTCAA GGTGAGGCCGTATACACGAAGCCATTCACTTCGTCGTTCTTCGCGTGTTA ATTACCTCACGCCGCTTCGCGCTTCGTGATGTGCTAGCCTGGCGAATACA TCCGGCGTGCTCAGTCCCAGCTTTGTAGGGAGGTCGAAGTCAAATATTTT ACAACTACGGCATGCACGGCTATGAGCACAACTCCCCCCCCGGCTTCTCT GCGCTTGCCCCGTGTTTGTCGTGTCGAGAGAAGCGTTTAGCACGAGCCAC TTGACGGTGGTCTGTCGTGCCAACGCATTCTCACTTGTTGTGGACACTCA ACGGCACTTACTAATAGAACGGTGTTCAAGACCGACGTGTATAGAAAAAA TGGAGATGGAAAAATAATATATATATATGAGACGAAGTTGCCCGTGTCGC GGATAGGCCATGAATACACCCGTAGAGACCTGTCAACGCATTCCATTGAG TTCAAAACTCCCCTCGTGACAACCGGCAAGCTTGTAGTCAACCACACACA ATCGCACCCGCGGGACCCCCGGCCTTCAGGAAGCGTTTCAGGAGCTGGCC GACTTGAACGGCGCCACGAGCGTGTCGGTGACCTTCGGGCAGGAGGCCCC GCATCTGCAGCTCTCCGCCAAGGGCTCCAACGGTTCCAGGTACGCCACGG CGCCCCGGAAGCGCTACCGAGCCGTGGTCCCGTCGTGTTTTGGGTCGTCT TTTCTGTCGTTTTTTTTTTTTTTGCGGCACTGATTTCCGCGGAGCACCTC TCCGCCTTGTGGCGTGTCCGTCTTCCCCCATGGTGACCTTGATGCCCCCC CTGGGTTCTTGGAGTGAACACGGGGTACCGATGCGTGGAAGGACACCTAC CCCACCTGATGCTTGCAGTGCAACATCAAATATTTACTCCGTATACATGT CACCGCCACATTAGACTTTTTTCGTCGCCGCGCGCGAAGGCAGCGTTGCT GTTGTGTCGTTGACATTGTGAAACCGTCATGACCTGTGCGGATAAGGACA GGTCGACGACATGTGACCTTGATCCCACAGAGCACGGGACAGATTCTCAT GGCCACGTGACAATCATCCCCCCAGAATCGATGGTTGCCGGATGTCCTTG TCCGCTCTCTGTCTGCTTTTCTTTCTGTCTGTGCTTGCGACTCTCTGTCC ATCTCTATCACTCTCACTCTCACCCTCGCACCCACACGCTCTCGCTCTGT CTCTATATTTCTTCTCTCTCTATATATATACATGTATATCTATGTCGCGC ACTCCCTTGCCCCTCTGCCTGGTCTCTTACTCACTCGCTCACTTTCTCTC TCTGCCTCTCTATTGTTGAAGTCTGTACTGTGTAATATCTATCCCTGTCT CGCGCGCTCCCTCCCCCGTCTCTCGGCCTTGCTTGCTCACCCAGTCACGT TTTCTCTCTATAGCTCTATACCTCCCCGTATCTCTCTCTACCCCTATCTC GTGCGCTCGCCCCCCCCCCCCTCTCTCTCTGTTCGATTTTCTCACTCCCT CATTCTGTTGTTTCTCTAAAAATGTATAGGAGTATGTCTGCCGTGCTTTT ACGTGTTTTTTCGTGCGTCGCACGACTTCTTCCTCCTCCTCCTTCAGCGA GATCGACTTCCCCAAGAGCTCAGAGGCGTTCGTGTGCTTCGAATGCACCG CGAGGAGGGTGTCGTGGACCTACCTCATGACCGGGATGGAGACCGGCATG CGCGCCCTGGGGCACGCCAACGAAACCTACTTCAGAGTTAACGAGGAGGG CATCCTCTGCATACAGCATCAGGTAACGTGACTTGATCGCTCTCCCTCTA ATAGAGGACTGCTCTCGGTACAAAAGCTTTGCTGAAAGGTCGCCGTTGGT GTGGAACACATCTGTCTTCGTGTGGGTCTGAAATGCTGACCACATCAGGA TCAAAAGGAGACCAACCTAGGCATCTTGTTTTGAGGACAGCAACATTCAC CATTTGGATAGCGTTGGGTCGATCTTGGAGCCGGAGCATCAGGTGACGTG ACTTGGTCACGCCCTGCGGTAATAGTCAAGAAGGGGGGTTCAGCATCAGG TGGGGCGACTTGATTGCTCTCTTTCGTTCTTGAGGCAACACGAGTCACGG GCGGGCTTGACCTCATGAGGTGGCTTGATTGCCACGAGTCGGGGTGAATG CGCAGAATGTTGAACACCTCGTTCTCACGCGAAGGGCACAGATTGTCGGG GCGGGCAGGAAGGTGGGATAGGCTAAAACATATTTCTGGCATCCATTTGC CAAGTGGGGACACTAATTTTTCGATTCTCCTGGCACATTGCTCGATTTTG GCGCATGCGCTGGCACACAGATGTTGGCGCATGCGCTGGCACACAGCGAG ACCTCCTGATGCAATAACGACGGTATACCCCTGATGTTTACAGCGGGGAG AGAAAGAGTAGCGGAACTCGAAACATACGGAGTTCCATCAAGAGATGGGG GAGGGCGTTGATTGGGTGCTCTGACTAGGGTGTTTATGTGTGCCTAAGTG GGTTGGGACGGCCCATTATGCGACCTCCTCGGGGGGGGATATTCGGAACG GAACCCCACCAACGCTCTAGCTGGGTGCCAGATGACTGTGGGGTATATCG TTTCTCGCGCCAAACAGCAACACGTGTGCCCGCCGATCATTTTTTCATGA CGCGTAGATCCCCATGAGCATGGGGCAGACCAGCTTCGTGGACGTGTTGC TGTGCCCGGACATACAAGAAATGGACATGGACGAGCAGGAGGAAGAGGAG GAGGAGGAAGGTCAAGACGGGAGACATACGATGGAAGAGTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9822:947..5688-

>mRNA_E_fasciculatus_S2_contig9822.17829.1 ID=mRNA_E_fasciculatus_S2_contig9822.17829.1|Name=mRNA_E_fasciculatus_S2_contig9822.17829.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=939bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9822:947..5688- (Ectocarpus fasciculatus EfasUO2)
GGGGGGGGGGGGGGGGGGCAGGAGGAAGACGAGGAAAGCGACGAAGTCAT
CTTCTCGTGCCGGCTGGACAACGCCAAGTCGATCACCACCATCCTCTCCT
GCCTTAGCCACGGAACCCGCAAGGATCAGCAGGCCCAGTGCGAGGTGACG
AAGGAGTCGATGACCCTCGTGGTTTCGGGAAGAGCCAAGTACACACAGGC
GCAGGGGTCGCTAGACAGCAGCCTGTTCCAGGAGTACGACTGCGTAGAGG
GCGCCAAGTTCGGCATCAACCTCACCACGCTGCTGGAGTGCCTCCAGATC
TTCGGCCCCGGGTCTCTCGCCCAGACGAGCGTCAGCATGGCGTACCAGGA
GGCTAGAGCGACGTTCCGCCTTACCCTGGAAGAGGGCGGGGTGTTCACGA
GCTGCGAGATAAGGACCATCCACCAGGACGAGGAAGCCATGGAGTTCTCA
ACACTGGCCAAGGCGTTCGGCAGGAGCAAAGAGGTCTGCCGCTGCATCCT
CAAGTCAGAAATTCTCAAGGAAGCGTTTCAGGAGCTGGCCGACTTGAACG
GCGCCACGAGCGTGTCGGTGACCTTCGGGCAGGAGGCCCCGCATCTGCAG
CTCTCCGCCAAGGGCTCCAACGGTTCCAGCGAGATCGACTTCCCCAAGAG
CTCAGAGGCGTTCGTGTGCTTCGAATGCACCGCGAGGAGGGTGTCGTGGA
CCTACCTCATGACCGGGATGGAGACCGGCATGCGCGCCCTGGGGCACGCC
AACGAAACCTACTTCAGAGTTAACGAGGAGGGCATCCTCTGCATACAGCA
TCAGATCCCCATGAGCATGGGGCAGACCAGCTTCGTGGACGTGTTGCTGT
GCCCGGACATACAAGAAATGGACATGGACGAGCAGGAGGAAGAGGAGGAG
GAGGAAGGTCAAGACGGGAGACATACGATGGAAGAGTAG
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