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Homology
BLAST of mRNA_E_fasciculatus_S2_contig958.17599.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA8_ECTSI) HSP 1 Score: 862 bits (2228), Expect = 6.890e-310 Identity = 487/555 (87.75%), Postives = 507/555 (91.35%), Query Frame = 1
Query: 1 LKAKDDEIASLKASKATVTNRQEDWQEDPHPPEQDPDPSERTNAGRCGPRKLVTYGRMVVTAGRLASEPRQRPENAVAQPSEQETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELAQTRSDTETMRQRLKEERRESRLRVGDSDKARSEAQQRIEVLEFDLNETAKACQRESLKASTFEGMYQEASTTATLLQAEVEQCRTDAKMIAQELTRMQIESENSSPLAGLTPSLALSSPIDVGRAVSGAEGEEVTKGKLGEEQEAETTSLKKTITQLESDKSESGGAMKNSLEAHRLEREEREQAFKETQKRADSLAEENSRLRATIEKQEAESERQREEQDERHDRDIKREIILSQQNLDSASLRDRLCRTLDELCGAEEAGELALTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMPAEDGNGRVPGGSGESPGSATHKKPECYLCGQHEGEAADRVVCVGMAPNRALASVVVKFAFRRQLVRTLKEIGAALSG*GSV 1665
LKAKD EIASLKA K V RQED Q+DP PE+ P PSERTNAGRCGPRKLVTYG+MVVTAGRLASEPRQRPE AVAQPSE+ETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVN+AEKEKAHLETRVALLSDEVKLQIAPLKALQLEL QTRSDTETMRQRLKEERRESRLRV DSDKA+SEAQQRI++LEFDLNETAKACQRESLKASTFEGMYQEAST ATLLQAEVEQCRTDAKMIAQELTRMQIESE SS L GLTPSLALSSP+DVGRAV G +G+EVT GKLGEEQEAE SLKK I QL S+KS+SG AMKN LEAHR E EERE+AFKE QK+ADS AEEN LRATIEKQE ESERQR E+DERHDRDIKREIILSQQNLDSASLRDRLCRT+DELCGAEEAGEL LTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGM AEDG GRVPGGSGESPGS TH +PECYLCGQ A DRV CVGMAPNRALASVV+KFAFRRQLV+TLKEIGAALSG GSV
Sbjct: 100 LKAKDHEIASLKALKENV--RQEDRQQDP--PEKGPGPSERTNAGRCGPRKLVTYGKMVVTAGRLASEPRQRPEKAVAQPSEKETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNVAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLRVSDSDKAKSEAQQRIDLLEFDLNETAKACQRESLKASTFEGMYQEASTMATLLQAEVEQCRTDAKMIAQELTRMQIESEKSSALVGLTPSLALSSPVDVGRAVGGVDGKEVTTGKLGEEQEAEIASLKKIIAQLASEKSDSGDAMKNLLEAHRREGEERERAFKEMQKKADSFAEENIGLRATIEKQEEESERQRVEEDERHDRDIKREIILSQQNLDSASLRDRLCRTVDELCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGTGRVPGGSGESPGSVTHAEPECYLCGQQGRGATDRVACVGMAPNRALASVVMKFAFRRQLVQTLKEIGAALSGQGSV 650
BLAST of mRNA_E_fasciculatus_S2_contig958.17599.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F2_9PHAE) HSP 1 Score: 781 bits (2018), Expect = 1.800e-279 Identity = 453/560 (80.89%), Postives = 475/560 (84.82%), Query Frame = 1
Query: 61 RQEDWQEDPHPPEQDPDPSERTNAGRCGPRKLVTYGRMVVTAGRLASEPRQRPENAVAQPSEQETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELAQTRSDTETMRQRLKEERRESRLRVGDSDKARSEAQQRIEVLEFDLNETAKACQRESLKASTFEGMYQEASTTATLLQAEVEQCRTDAKMIAQELTRMQIESENSSPLAGLTPSLALSSPIDVGRAVSGAEGEEVTKGKLGEEQEAETTSLKKTITQLESDKSESGGAMKNSLEAHRLEREEREQAFKETQK-----------------------------RADSLAEENSRLRATIEKQEAESERQREEQDERHDRDIKREIILSQQNLDSASLRDRLCRTLDELCGAEEAGELALTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMPAEDGNGRVPGGSGESPGSATHKKPECYLCGQHEGEAADRVVCVGMAPNRALASVVVKFAFRRQLVRTLKEIGAALSG 1653
RQEDWQ+DP PEQ P PSERTN G+ GPRKL+TYG+MVVTAGRLASEPRQRPE AVAQPSEQETLE ERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLEL QTRSDTETMRQ LKEERRESRLRV DSDKA+SEAQQRIE+LEFDLNET KACQ ASTFEGMYQEAST ATLLQAEVEQCRTDAK+IAQE IESE SS L GLTPS+ALSS +DVGRAV G EGEEVTK KL EEQEAE SLKKTI QLES+KSESG AMK+ LEAHR E EERE+AFKE QK RAD AEENS LRA IEKQEA+S+RQR E+DER DRDIKREIILSQQ+LDSASLRDRLCRTLD LCGAEEAGEL LTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGM AEDG+GR+PGGSGESPGS TH +PECYLCGQ + A DRV CVG+APNRALASVVVKFAFRRQLV+ LKEIGAALSG
Sbjct: 16 RQEDWQQDP--PEQGPGPSERTNTGKWGPRKLITYGKMVVTAGRLASEPRQRPEKAVAQPSEQETLEKERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQXLKEERRESRLRVSDSDKAKSEAQQRIELLEFDLNETVKACQ-----ASTFEGMYQEASTMATLLQAEVEQCRTDAKIIAQE-----IESEKSSALVGLTPSVALSSSVDVGRAVGGVEGEEVTKEKLREEQEAEIASLKKTIAQLESEKSESGDAMKSLLEAHRREGEERERAFKEMQKKCVTSGARILTSSHCLSFSQSHSIRRPARRADFFAEENSGLRAKIEKQEADSKRQRVEEDERRDRDIKREIILSQQHLDSASLRDRLCRTLDALCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGRMPGGSGESPGSVTHAEPECYLCGQQDRGAVDRVACVGIAPNRALASVVVKFAFRRQLVQALKEIGAALSG 563
BLAST of mRNA_E_fasciculatus_S2_contig958.17599.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD04_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.990e-6 Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 1267 RTLDELCGAEEAGELALTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMPAEDGNGRVPGGSGESPGSATHKKPECYLCGQHEGEAADRVVCVGMAPNRALASVVVKFAFRRQLVRTL 1626
+T++ L AE A E TC +C +LFK P T+APCGHT CA C + GN VP C +C E + ++ + PN ALA + +F FR+Q + +L
Sbjct: 727 QTVNSLLDAEHASESTFTCLQCMQLFKQPMTLAPCGHTYCASCLT--------KCGNVDVP------------SSIVCKMC-----ETSTKMETECIFPNLALADLTARFIFRQQSLASL 821
BLAST of mRNA_E_fasciculatus_S2_contig958.17599.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKS0_PYTIN) HSP 1 Score: 60.1 bits (144), Expect = 9.920e-6 Identity = 39/125 (31.20%), Postives = 58/125 (46.40%), Query Frame = 1
Query: 1252 RDRLCRTLDELCGAEEAGELALTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMPAEDGNGRVPGGSGESPGSATHKKPECYLCGQHEGEAADRVVCVGMAPNRALASVVVKFAFRRQLVRTL 1626
++ L RT+ L AE A E TC +C +LF DP T+ PCGHT C+ C + GN +P C C + + E + G+ N+ALA + +F FR+Q + +L
Sbjct: 636 QEALERTVGSLVEAETASEATFTCMQCMRLFVDPMTLTPCGHTYCSSCLD--------KLGNTSIP------------STIVCKECPKDQHEETE-----GIFTNQALADLTARFIFRQQSLSSL 735
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig958.17599.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
| Uncharacterized | 6.890e-310 | 87.75 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 1.800e-279 | 80.89 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| RING-type | 1.990e-6 | 33.33 | domain-containing protein n=1 Tax=Phytophthora meg... | [more] |
| RING-type | 9.920e-6 | 31.20 | domain-containing protein n=1 Tax=Pythium insidios... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 68.2 |
| Seed ortholog evalue | 1.3e-08 |
| Seed eggNOG ortholog | 164328.Phyra74793 |
| Model size | 1758 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| EggNOG free text desc. | Ring finger |
| EggNOG OGs | 2DZKP@1,2S741@2759,3QFA2@4776 |
| Cds size | 1485 |
| COG Functional cat. | O |
| Best tax level | Peronosporales |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842604.5992973-UTR-E_fasciculatus_S2_contig958:76..122 | 1696842604.5992973-UTR-E_fasciculatus_S2_contig958:76..122 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig958 77..122 + |
| 1696842604.6115835-UTR-E_fasciculatus_S2_contig958:542..667 | 1696842604.6115835-UTR-E_fasciculatus_S2_contig958:542..667 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig958 543..667 + |
| 1696842604.7078128-UTR-E_fasciculatus_S2_contig958:4516..4618 | 1696842604.7078128-UTR-E_fasciculatus_S2_contig958:4516..4618 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig958 4517..4618 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842604.623407-CDS-E_fasciculatus_S2_contig958:667..822 | 1696842604.623407-CDS-E_fasciculatus_S2_contig958:667..822 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 668..822 + |
| 1696842604.6362631-CDS-E_fasciculatus_S2_contig958:1093..1213 | 1696842604.6362631-CDS-E_fasciculatus_S2_contig958:1093..1213 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 1094..1213 + |
| 1696842604.6510332-CDS-E_fasciculatus_S2_contig958:1704..1842 | 1696842604.6510332-CDS-E_fasciculatus_S2_contig958:1704..1842 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 1705..1842 + |
| 1696842604.6607795-CDS-E_fasciculatus_S2_contig958:2137..2228 | 1696842604.6607795-CDS-E_fasciculatus_S2_contig958:2137..2228 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 2138..2228 + |
| 1696842604.6703777-CDS-E_fasciculatus_S2_contig958:2492..2612 | 1696842604.6703777-CDS-E_fasciculatus_S2_contig958:2492..2612 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 2493..2612 + |
| 1696842604.6830845-CDS-E_fasciculatus_S2_contig958:3148..3444 | 1696842604.6830845-CDS-E_fasciculatus_S2_contig958:3148..3444 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 3149..3444 + |
| 1696842604.698392-CDS-E_fasciculatus_S2_contig958:3951..4516 | 1696842604.698392-CDS-E_fasciculatus_S2_contig958:3951..4516 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig958 3952..4516 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig958.17599.1 >prot_E_fasciculatus_S2_contig958.17599.1 ID=prot_E_fasciculatus_S2_contig958.17599.1|Name=mRNA_E_fasciculatus_S2_contig958.17599.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=495bp
MVVTAGRLASEPRQRPENAVAQPSEQETLETERAVAAMGAKHTEQQLLRA SRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEV KLQIAPLKALQLELAQTRSDTETMRQRLKEERRESRLRVGDSDKARSEAQ QRIEVLEFDLNETAKACQRESLKASTFEGMYQEASTTATLLQAEVEQCRT DAKMIAQELTRMQIESENSSPLAGLTPSLALSSPIDVGRAVSGAEGEEVT KGKLGEEQEAETTSLKKTITQLESDKSESGGAMKNSLEAHRLEREEREQA FKETQKRADSLAEENSRLRATIEKQEAESERQREEQDERHDRDIKREIIL SQQNLDSASLRDRLCRTLDELCGAEEAGELALTCQRCAKLFKDPHTMAPC GHTLCAGCCAGGDGGMPAEDGNGRVPGGSGESPGSATHKKPECYLCGQHE GEAADRVVCVGMAPNRALASVVVKFAFRRQLVRTLKEIGAALSG* back to topmRNA from alignment at E_fasciculatus_S2_contig958:77..4618+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig958.17599.1 ID=mRNA_E_fasciculatus_S2_contig958.17599.1|Name=mRNA_E_fasciculatus_S2_contig958.17599.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4542bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig958:77..4618+ (Ectocarpus fasciculatus EfasUO2) TTGAAAGCTAAAGACGATGAGATCGCCTCCTTGAAAGCCTCGAAAGGTGA
GCGCGGCGTGGTCTTGGCATCCCAGTACAAAACCACCATTCATTATCAAA
ACGAATAATTAATGTGTGAAGAACGTTGAGGAGATGGAACAAACGGTAAA
CGGTACAGAACGCGGGCGAGGTAGAGTACCATCATCGCCAGGTATTGACA
ATAACTCTTCTTGCACAATGGTTTTGCAGCCAAGAAAGGGAAACAAGGTC
ATGAAATATTCTGGCAGGCGGACTCCCACAACCCTCCCTCCGTCAACAGG
TCGACCTCTCCTTGAGAGACCCATCTTTAGAATGTACTTGCCTCCTTTGT
ACTATTCCATGACGCATACATCTCGCATCTACCGCCGTTTACCGTTCAAT
AACGAACCCGTGTGATGATCGTCCCTTCGCATCGTTCAACTGCTGTATAT
GTATATAACACCCAAGCAACCGTTACAAACAGACAAGAGGACTGGCAGGA
AGATCCTCATCCTCCAGAACAAGACCCTGACCCGTCCGAAAGAACGAACG
CTGGAAGATGTGGTCCGAGAAAGCTGGTCACCTACGGGAGAATGGTTGTC
ACGGCCGGCAGGCTAGCATCAGAACCCCGGCAGAGACCCGAAAATGCCGT
GGCGCAACCATCGGAGCAAGAGACGCTGGAGACGGAGAGGGCGGTGGCTG
CCATGGGAGCCAAACACACCGAACAACAACTTCTGCGTGCTAGCCGGTAG
GCTTGATGCAAACCTCGAATGATTCCTACCCTGAGCATATTTTCATTGTC
TCCCAGAGATCAGCCCATACGGGGGGATCGGTTGCAAGTACGTTGGGGGT
CTCTGCAGCTGGTAGTGTCCCGTGCCGGAACTGGTTCCATCCAATCTCGC
AGCTTGGCATGACCCTAAATGACACGGTCCTCAATATCACGCTAGATATG
CATGGGTTTTCATAGTTGGCATCGGTCTGGTTACCGGTTCCATTGAGCGA
ATGCGTGCTTGTGACAGAGATGTTCGGGGGCAGCTGGAGCGCGCCCTTCA
AGAGGCCGAAGCCCTTCGTGCCGACAACATCGCATTCAAAACCAGAGTCA
ACCTCGCAGAAAAGGAAAAGGCACACCTAGAGACGCGGTAAGTAAGCACA
TCTGGCTGCCACATGTGTTGCGGGGGGGTATTTCTTGCTATACCCCGAGG
AATTAGATTCTCTAGTCAGGCAAGTTGGGCTATTTCGACCGCTGGGCATT
CCCTCTTTTCTAGGTTCGCATTATTTCTCCGCGCGTGAGCCGTTTGGTGT
CTCACCAACGGTGCACCATGTTCTTTTGCATTCAATCGAGTGTGCCATAC
CGTACGGGCCCGGAGATAACAAACGTTAAGATCGGCATCCCTTCTTATTT
CGTCGCCACTACCGTCGAGCACAGGTTGTTACAGGTTGTGATATATAGAG
TTTAATAGTAGTCTAAGTATACGCCGCTTAGGTGTGCGTTTTGACCCATT
CTCCGAAGTATTCGTCAGTATGTGAGCCTCTGTTTCCAGAAGTCAAAGTT
AACAAAAGGTATCCTCACGTACCTTGGACTTGTCCGATGTTTTGCCTTTT
GTGTCGGTGGGTGGATCCGGTTGGTCAGCGTGGCTCTCCTATCCGACGAA
GTGAAACTCCAGATTGCACCTCTCAAGGCGCTACAGCTGGAGCTAGCGCA
GACGAGATCCGACACGGAAACGATGCGGCAAAGGCTAAAAGAGGAACGCA
GAGAGAGCCGGCTCAGGTAAGCATTCTCTCTCTCTCTCTCTCTCTTCCTG
CCTCCCTCGGGTACAACGGGTACAACGCACGAGGAGGGTGGACAGCCTCT
GTTGAGGCTAGGGCGGAAATGGCAAGATGTCCTTCCAGTATGGTGTATCA
CCACCAACCGTTGCAGAACGCCGCCGGCACATGCATGCCCACGAGGGGGG
GGAGCTTCCTGCATTGCAGGGCACATGCTGCGGCAGCAGAAGATATGTAG
TGAAAGTATTTTATGCGCTTTTGCGCCAAACTTGATTGAATTTGTTCGGG
ACTCGTTGCAGGGTCGGCGACAGCGACAAGGCTAGGAGCGAGGCCCAGCA
GCGGATAGAAGTGCTTGAGTTCGACCTCAATGAGACCGCAAAGGCGTGTC
AGGTGAGCATATGTTGGTGCCATTAAGTACCTTGCTAACGGTTCAAGAAA
ACAGTCGCCCACCTGCCAGATTATTTATGGTCCCAACGCGAATGCCATAT
TACGGCCGGGCAGAAGATCAAGTGGATAGAGAGGTAAGATATTAGGACGA
AATACACGGTAGGACACGTCGGTTGTATATTACATGTACTGAAGCCCTCG
TTTTCCAAGCACGAAGGTTACCAATACCTACAACTTTCCTCCCTCCGCAC
GATACGGCGCTTCCAGCGAGAAAGCTTGAAGGCGTCGACATTCGAGGGGA
TGTACCAAGAGGCTTCCACGACGGCCACGCTTCTCCAAGCAGAAGTAGAA
CAGTGCAGAACAGACGCCAAAATGATAGCGCAGGAGGTGAGTACGTGTTA
CGGGTGGTAGTTCTTTCACGTGAGTGGTAGGTGGAATGTGTGTAGTAGCT
CTCGAGCCGTCTCACTGTTGTGCCTTTTTGGCATGAAGTTCGTGGAGGAT
GCGGGCAGTTTCCTCATTGCCTCTTTGGATGTTCGTGTGTGCCCTGTTAG
GGTAGCTAGTCTCTGACACAACGGAAGACGTCCGTGTCGATTGGACCGGT
ACGGGTGTAAGAAGGTACTCTGCGAGGTCGCAACAACAATGAATGATGGT
ACGACAACAATGGCTCGCAAGGCAAGGCTACCACTTCATTTTTTCAGAGC
GATGGAAATGCCAACAGAAGTGACGGCTGGCAAATTCCGTGCATGAGTAT
AGGCACATCAATGTGGAATCTGGCGTATCGCTTGTGAGGCGAAGATGTCG
GTAGGTGGACGGGATCATGATCGCCGAAAACGGCTTCGATGCCTAATTCC
TCAATATCTCGTTCACCCCGTGCATGCATGTGCATTCCCTCTGGTGCATT
CCCGTTCACCCCTGTTTACCAGCTTACGCGGATGCAGATCGAAAGCGAAA
ATAGCAGCCCCTTGGCGGGCTTGACACCCTCCTTGGCTTTGTCCTCACCC
ATTGACGTTGGAAGGGCTGTGAGTGGGGCTGAGGGTGAAGAGGTGACGAA
AGGGAAATTGGGGGAGGAGCAGGAGGCTGAAACCACATCTCTGAAGAAAA
CCATTACGCAGCTGGAATCGGATAAATCAGAATCTGGTGGCGCAATGAAG
AATTCGTTAGAGGCGCATCGTCTTGAGCGTGAGGAGCGGGAGCAGGCGTT
CAAGGAGACGCAGAAAAGGTGGGTGACTTCTGGTTTGTGTCGTCAATGTT
TGCCCATATGGAAAGACAAGAGAGGAATGCCAACCTTAACCTTCGTTTCT
TGCAAAAAACGAAATATATGGAAGGTCGAAGGCTTGCTTCCAGTTTTCAG
GGCAGCGAGATGCGCCGTTGGCATATATATGTCGTGGCGGTAGGAAAGGG
GTGGTGGTTGTACGAAAGGGCGCGTATGCTCCGGGGCTTTTTCAACACAC
ATGCGAAACTGTTATGAGAAACACGAAGTAATCCTGGCATATCATTACGG
TCGTTCGGAGACAGGCGAATGATAAAACGAGTATGTCGAGCAAGCATCTG
ATGTTAGCTAACTACGCTTAAGCTGCCCGCACATCCAACACCGGGCACGC
TCCGTATAAAACCTATGTAGTACAGCAGTCGTGGCACCGTCGACTACGCC
CGGTGCTCGAATTCTAACCTCCAGTCATTGCTTGTCCTTGTCGCAACCTC
ACCCCATCCGACACCCCGCTCCAAGAGCTGACTCCCTCGCTGAAGAGAAC
AGTCGCCTACGTGCTACCATCGAGAAGCAAGAGGCAGAAAGCGAGAGGCA
GCGAGAGGAACAGGACGAGCGTCACGACCGCGACATCAAACGGGAGATTA
TCTTGTCCCAGCAGAACCTGGACTCGGCGTCATTGAGAGACAGACTGTGC
CGGACCTTGGACGAACTGTGCGGGGCGGAGGAGGCCGGGGAGCTGGCGCT
GACTTGCCAGAGGTGCGCAAAGCTCTTCAAGGATCCTCACACCATGGCAC
CTTGCGGGCACACCTTGTGCGCGGGTTGTTGTGCGGGTGGCGATGGAGGC
ATGCCAGCTGAGGACGGTAATGGAAGGGTGCCTGGGGGTAGCGGCGAGAG
CCCAGGCTCGGCCACGCATAAGAAGCCGGAGTGCTATCTGTGTGGGCAGC
ACGAGGGCGAGGCTGCGGACAGGGTGGTTTGCGTCGGGATGGCGCCGAAC
CGTGCCTTGGCGAGTGTGGTGGTCAAGTTTGCCTTCCGTCGCCAGCTTGT
GCGAACCTTGAAGGAAATCGGCGCTGCGCTGTCGGGGTAAGGCTCCGTGC
CCCCCGAGAGAGGTACATTTTTCGTAGACTTGGCCGTGCTGCATGTGTCG
GGAGGGCTTTGTGGCTTGAAAATGGTTGGTGCTACTGAACTG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig958:77..4618+ >mRNA_E_fasciculatus_S2_contig958.17599.1 ID=mRNA_E_fasciculatus_S2_contig958.17599.1|Name=mRNA_E_fasciculatus_S2_contig958.17599.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1485bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig958:77..4618+ (Ectocarpus fasciculatus EfasUO2) ATGGTTGTCACGGCCGGCAGGCTAGCATCAGAACCCCGGCAGAGACCCGA AAATGCCGTGGCGCAACCATCGGAGCAAGAGACGCTGGAGACGGAGAGGG CGGTGGCTGCCATGGGAGCCAAACACACCGAACAACAACTTCTGCGTGCT AGCCGAGATGTTCGGGGGCAGCTGGAGCGCGCCCTTCAAGAGGCCGAAGC CCTTCGTGCCGACAACATCGCATTCAAAACCAGAGTCAACCTCGCAGAAA AGGAAAAGGCACACCTAGAGACGCGCGTGGCTCTCCTATCCGACGAAGTG AAACTCCAGATTGCACCTCTCAAGGCGCTACAGCTGGAGCTAGCGCAGAC GAGATCCGACACGGAAACGATGCGGCAAAGGCTAAAAGAGGAACGCAGAG AGAGCCGGCTCAGGGTCGGCGACAGCGACAAGGCTAGGAGCGAGGCCCAG CAGCGGATAGAAGTGCTTGAGTTCGACCTCAATGAGACCGCAAAGGCGTG TCAGCGAGAAAGCTTGAAGGCGTCGACATTCGAGGGGATGTACCAAGAGG CTTCCACGACGGCCACGCTTCTCCAAGCAGAAGTAGAACAGTGCAGAACA GACGCCAAAATGATAGCGCAGGAGCTTACGCGGATGCAGATCGAAAGCGA AAATAGCAGCCCCTTGGCGGGCTTGACACCCTCCTTGGCTTTGTCCTCAC CCATTGACGTTGGAAGGGCTGTGAGTGGGGCTGAGGGTGAAGAGGTGACG AAAGGGAAATTGGGGGAGGAGCAGGAGGCTGAAACCACATCTCTGAAGAA AACCATTACGCAGCTGGAATCGGATAAATCAGAATCTGGTGGCGCAATGA AGAATTCGTTAGAGGCGCATCGTCTTGAGCGTGAGGAGCGGGAGCAGGCG TTCAAGGAGACGCAGAAAAGAGCTGACTCCCTCGCTGAAGAGAACAGTCG CCTACGTGCTACCATCGAGAAGCAAGAGGCAGAAAGCGAGAGGCAGCGAG AGGAACAGGACGAGCGTCACGACCGCGACATCAAACGGGAGATTATCTTG TCCCAGCAGAACCTGGACTCGGCGTCATTGAGAGACAGACTGTGCCGGAC CTTGGACGAACTGTGCGGGGCGGAGGAGGCCGGGGAGCTGGCGCTGACTT GCCAGAGGTGCGCAAAGCTCTTCAAGGATCCTCACACCATGGCACCTTGC GGGCACACCTTGTGCGCGGGTTGTTGTGCGGGTGGCGATGGAGGCATGCC AGCTGAGGACGGTAATGGAAGGGTGCCTGGGGGTAGCGGCGAGAGCCCAG GCTCGGCCACGCATAAGAAGCCGGAGTGCTATCTGTGTGGGCAGCACGAG GGCGAGGCTGCGGACAGGGTGGTTTGCGTCGGGATGGCGCCGAACCGTGC CTTGGCGAGTGTGGTGGTCAAGTTTGCCTTCCGTCGCCAGCTTGTGCGAA CCTTGAAGGAAATCGGCGCTGCGCTGTCGGGGTAA back to top
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