mRNA_E_fasciculatus_S2_contig944.17477.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig944.17477.1
Unique NamemRNA_E_fasciculatus_S2_contig944.17477.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E0_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 2.620e-173
Identity = 279/310 (90.00%), Postives = 291/310 (93.87%), Query Frame = 1
Query:    1 MGGPPADGYGAGGMLEGGGGGGFSGQGAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQQVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQMLTSQLDGSSGGGGAVGEIVGAGGVGA 930
            MGGP A GYG   ML+   GGG   QG VGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGV+HEYRSSQGRLTLYLYNLAAAPLTDLRLGVPS+PYLRSQIGQGP GLDVGGRAQQVLMCECLQPF EAPAL+VSFL+EGRPHSFELTLPLSVCSFIEPLQLEA DFARRWEMLGNASKEENGEVWAG PVTAARWAEVRGMVTSA+KMGITEGPDSTS+SNDSGT+LRAAG+LRTGSL PQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAV +RQ+L SQLDGSSGGGGAVGE+VGAGGVGA
Sbjct:  937 MGGPSAGGYGGXXMLQXXEGGGLGEQGVVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVIHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSMPYLRSQIGQGPSGLDVGGRAQQVLMCECLQPFPEAPALTVSFLMEGRPHSFELTLPLSVCSFIEPLQLEAHDFARRWEMLGNASKEENGEVWAGVPVTAARWAEVRGMVTSAIKMGITEGPDSTSHSNDSGTSLRAAGSLRTGSLNPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVGIRQLLISQLDGSSGGGGAVGEVVGAGGVGA 1246          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIT0_PYTIN)

HSP 1 Score: 161 bits (408), Expect = 1.250e-38
Identity = 103/276 (37.32%), Postives = 155/276 (56.16%), Query Frame = 1
Query:   52 GGGGGFSGQGAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQ--QVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQMLTSQLDG 873
            GGGG  +  G +G+ P ++ +V  W R LM++ +G+LFE   ++IGV HEYR SQGR+ L+  N  A  L   ++ V + P  R Q  + P    VGG+ Q  Q +M E + PF   PAL VSF   G    + L LP    +F+EP++L  EDF +RW  L     E+   V +   +     A+ R  +T ++K+   EG D+      +GT++ AA T RTG+  P G KIS+G ++R+E    S ++RI+VRAVH  V++A++  L + L G
Sbjct:  681 GGGGPAASGGVIGMDPALEPKVREWSRGLMLAPQGVLFENDVLQIGVKHEYRGSQGRVGLFFGNKTADTLNAFKVAVETTPAFRLQCEEVPAS--VGGKQQVKQQIMIEAMAPFIAPPALKVSFSRGGXSXQYXLALPSHAVAFLEPVKLXGEDFMKRWGALEGQDXEQQEVVTSTLKMD---MAQTRKWLTESIKLAPAEGLDA------AGTSVTAAATFRTGTAAPNGDKISVGCLVRVEANTMSNSYRITVRAVHKDVSLAVKNDLKAVLVG 945          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYF2_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.000e-38
Identity = 105/279 (37.63%), Postives = 164/279 (58.78%), Query Frame = 1
Query:   67 FSGQGAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQ--QVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGA----PVTAARWAEVRGMVTSAMKMGITE-GPDSTSNSNDS-----GTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQMLTSQL 867
            F    + GV P   AQ+SAW   ++ +++G+L+E   ++IGV  E+R SQGRL+L+  N + APLT +   V  V +LR Q  +     +VG + Q  Q +M EC+QPF     L+V++ L G+PH+F++ LP    SF+EP++L A+D+A+RW  L    +E+  EV+A A    PV   +      M+   MK G+ E G +S+S +++S        L  A T RTG+  P G K+S+GA+++LE   A+ ++R++VRAVH  V+ AL+  L   L
Sbjct:  666 FGAPSSPGVDP---AQLSAWFFKVVGTNQGVLYESDVLQIGVKQEFRGSQGRLSLFYGNKSGAPLTSVSAAVKPVAFLRVQAEE--LAREVGPKQQLKQQIMVECMQPFVSPAELTVAYTLNGQPHTFDVKLPCVATSFLEPVKLAADDYAKRWAALEGQGREQQ-EVFAAAAKMDPVATTK------MLVEGMKFGLVEVGIESSSGAHESQGLDPAAGLALAATFRTGTAGPTGEKLSVGALVKLESNAAANSYRLTVRAVHPDVSTALKNNLKGVL 932          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYZ6_SAPPC)

HSP 1 Score: 155 bits (393), Expect = 1.050e-36
Identity = 95/255 (37.25%), Postives = 150/255 (58.82%), Query Frame = 1
Query:  109 AQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQ--QVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQMLTSQL 867
            AQ+++W   ++ +++G+L+E   I+IGV  E+R SQGRL+L+  N +A PLT++   V  VP+LR Q  +     +VG + Q  Q +M EC+QPF     LSV+F L G   +F++ LP    SF+EP++L  +DF +RW  L    +E+  +V+  A     + A V+ ++T  MK G+ EG D +         L  A T RTG+  P G KIS+G + +LE  P + ++R++VRAVH  V++AL+  +   L
Sbjct:  678 AQLASWFNKIVATNQGVLYESDLIQIGVKQEFRGSQGRLSLFYGNKSACPLTNVSASVKPVPFLRVQAEE--LAREVGPKQQLKQQIMLECMQPFVSPAELSVAFTLNGSSVAFDVKLPCVATSFLEPVKLSGDDFQKRWVALEGQGREQQ-DVFVAANKMDVQ-ANVK-LLTEVMKFGLVEGGDPSGG-------LALAATFRTGTTAPTGDKISVGCLAKLESNPQANSYRLTVRAVHPDVSIALKNNIKGVL 920          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y914_9STRA)

HSP 1 Score: 150 bits (378), Expect = 9.380e-35
Identity = 93/265 (35.09%), Postives = 139/265 (52.45%), Query Frame = 1
Query:   67 FSGQGAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPY--LRSQIGQGPPGLDVGGRAQQVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQML 855
            FS    V + P +  +++ W R L++S +G+LFE   +++G  HEYR SQ R+ L+  N  +  L   R+ V   P    R Q  + P  L    + +Q L+ EC+ PF   PAL VSF      H ++L LP    +F+EP++L AEDFA+RW  L    +E    V A +P+     A+ R  +T  ++          + S+     L  A TLRTG+  P G K+++G + R+E  PAS   RI+VRAVH  V+VA +  L
Sbjct:  709 FSSGEVVPIEPSLAPKLAEWTRGLLLSPQGVLFENDVLQVGAKHEYRGSQARVMLFFGNKTSDALAAFRVAVAPTPAAAFRLQAEEVPAQLAPKQQLKQQLLLECMAPFVAPPALRVSFARGDVQHQYDLALPCHAAAFLEPVKLSAEDFAKRWAALDGTERETQEIVQAASPLD---MAQARQWLTEQLRF---------AESSQGDGALSLAATLRTGTAGPNGDKVAVGCLARVEANPASNAVRITVRAVHRDVSVATKNCL 961          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K9H6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.890e-34
Identity = 87/246 (35.37%), Postives = 145/246 (58.94%), Query Frame = 1
Query:  109 AQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQQVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALR 846
            A+++AW   ++ + +G+LFE   ++IGV  E+R SQGRL+L+  N ++  LT+L + +  VPY R+Q+      L    + +Q +M EC+QPF     L +++ L  +P SFEL LP    +F+EP++L A+DF +RW  L    +E+     + A + A+       ++   +K G+ +G D+TS+       L  A T RTG+  P G KIS+G +L+LE +    ++R++VRAVH  V++AL+
Sbjct:  675 AKLTAWFNKIVTTGQGVLFENDFLQIGVKQEFRGSQGRLSLFYGNKSSQSLTNLGVVIKQVPYFRTQVEDVAKELAPKQQLKQQIMVECMQPFVHPAELVINYTLGSQPSSFELKLPCVATNFLEPVKLGADDFNKRWGALEGQGREQQDVFASKADLHASAK-----ILVDTLKFGLVDGADTTSS-------LSLAATFRTGTSAPSGDKISVGCLLKLESQ--GNSYRLTVRAVHPDVSLALK 906          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8N4_PLAHL)

HSP 1 Score: 148 bits (373), Expect = 4.150e-34
Identity = 91/266 (34.21%), Postives = 146/266 (54.89%), Query Frame = 1
Query:   58 GGGFSGQGAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQQVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQML 855
            GG  S    VG+   +  Q++AW R LM++ +G+L E   ++IG  HEYR SQGR+ L+  N  +  L +L + + +    R Q  + P  L    +AQQ +M E + PF+E P +++ F   G  +S+ + LP    SF++P+ L  E F +RW  L    +E+N  + A   V+     + RG +++++K  + +G  +T        TL  A T RTG+++P G KIS+G ++RLE      T+RI VRAVH  V++A +  L
Sbjct:  720 GGDLSNSKPVGLDAALAPQLTAWARHLMLNPQGVLLENDVVQIGAKHEYRGSQGRMNLFYGNKTSDTLNNLSVQLTTGNSFRVQSNEVPSQLAGKQQAQQQIMIEAMAPFTEPPTMTLKFSRNGTNYSYRMALPCQCTSFMDPVALSEEAFTQRWNSLEGHDREQNEVISA---VSKVDMTQARGWLSTSLKFAVVDGLSTTG-------TLLGASTFRTGAVSPNGDKISVGCLVRLEAGD-DNTYRIRVRAVHQDVSLATKNCL 974          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=14 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FE93_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.300e-33
Identity = 96/262 (36.64%), Postives = 148/262 (56.49%), Query Frame = 1
Query:   61 GGFSGQGAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQQVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALR 846
            GG +G  +VG      A+++AW   ++ S++G+LFE   I+IGV  E+R SQGR+ L+  N  +  +T+L L V  VP LR+Q+ Q    L    + +Q +M EC+QPF +   + V++ + G   S +L LP    SF+EP++L  EDF +RW  L    +E+     A   V A+       ++   MK G+ EG  S       G +L A  T RTG+ +P G KIS+G +L+LE +    +FR++VRAVH  V+VA++
Sbjct:  665 GGPTGSSSVGNDSVDPAKIAAWFNKVVGSNQGVLFENDVIQIGVKQEFRGSQGRMGLFYGNKGSVAVTNLSLMVKQVPSLRTQVEQVATELQPKQQLKQQIMVECMQPFVQPVEVVVAYTVAGLSTSIDLKLPCVATSFLEPVKLSVEDFHKRWGALEGQGREQQDVFTAKLDVQASAK-----LLVDVMKFGLVEGEVS------GGVSLAA--TFRTGTASPSGEKISVGILLKLESQ--GNSFRLTVRAVHPDVSVAVK 911          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: AP-2 (complex subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFV9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.500e-32
Identity = 94/259 (36.29%), Postives = 142/259 (54.83%), Query Frame = 1
Query:   79 GAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQQVLMCECLQPF--SEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEV--RGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVAL 843
            G  G+P EM+ ++    ++L+ +  G+LFE   +++G+ H+YR SQG++ L+  N  +  LTD    V    YL+ +    P  +  G +A+Q L  E ++PF  S+AP L +S+  +G+ H +ELTLP+   SF EP+ L A D+  RW  L   S+E    +   A  +    A V  R  +   + +   +G D     ND   +L A G+LRTG+  P G KIS+GA+LR+EV       RI+ RAVH TVA AL
Sbjct:  799 GVHGIPEEMRPRLETAFKALITTVSGVLFENDKLQVGIKHDYRGSQGKMVLFYGNKTSEALTDFAASVTKTFYLQMESQDPPKIVAAGEQAKQSLSMEVMKPFDYSDAPELLLSYTFQGQKHLYELTLPIVPTSFFEPVTLAAPDYMARWRSLEGQSRERQEILQQPANFSYDSSALVAFRLKILDGLHLAQAQGLDQ----ND--LSLSAVGSLRTGTAGPDGGKISVGALLRIEVNAQVRAMRITARAVHGTVAAAL 1051          
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD63_PYTOL)

HSP 1 Score: 142 bits (358), Expect = 3.330e-32
Identity = 91/265 (34.34%), Postives = 143/265 (53.96%), Query Frame = 1
Query:   79 GAVGVPPEMQAQVSAWLRSLMVSDKGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYLRSQIGQGPPGLDVGGRAQ--QVLMCECLQPFSEAPALSVSFLLEGRPHSFELTLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWAEVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKISLGAMLRLEVEPASGTFRISVRAVHVTVAVALRQMLTSQL 867
            G  G+   M+ Q+  W ++L+++ +G+LFE   I+IGV HEYR SQGR+ L++ N     L++ RL +   P    ++        V G+ Q  Q +M E + PF  APAL VSF   G  + + L LP     F+EP++L  EDF +RW  L    +E+   V +   +      + +  +T  +KM   +G D+  NS      +  AGT RTG+  P G KIS+G ++R+E    +  +RI+VRAVH  V++A++  L + L
Sbjct:  688 GVHGLDASMEPQLREWTKNLLLNPQGVLFENDIIQIGVKHEYRGSQGRIGLFIGNKTNDTLSNFRLQIEPNPAAAFRLQAEDVPNQVAGKQQVKQQIMIESMAPFVAAPALKVSFSRGGANYLYPLALPCQAVVFMEPVKLSGEDFMKRWNALEGQEREQQEVVTSTQKMD---MTQNKKWLTENIKMAQADGIDTAGNS------ITIAGTFRTGATAPTGDKISVGCLVRVEGNTTTNAYRITVRAVHKDVSIAVKNGLKAIL 943          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig944.17477.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.620e-17390.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
AP-21.250e-3837.32complex subunit alpha n=1 Tax=Pythium insidiosum T... [more]
AP-23.000e-3837.63complex subunit alpha n=1 Tax=Achlya hypogyna TaxI... [more]
AP-21.050e-3637.25complex subunit alpha n=2 Tax=Saprolegnia TaxID=47... [more]
AP-29.380e-3535.09complex subunit alpha n=1 Tax=Pythium brassicum Ta... [more]
AP-22.890e-3435.37complex subunit alpha n=1 Tax=Aphanomyces stellatu... [more]
AP-24.150e-3434.21complex subunit alpha n=1 Tax=Plasmopara halstedii... [more]
AP-22.300e-3336.64complex subunit alpha n=14 Tax=Aphanomyces astaci ... [more]
AP-21.500e-3236.29complex subunit alpha n=2 Tax=Monodopsidaceae TaxI... [more]
Uncharacterized3.330e-3234.34protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig944contigE_fasciculatus_S2_contig944:7384..11161 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score170.6
Seed ortholog evalue1.1e-39
Seed eggNOG ortholog112098.XP_008609751.1
Preferred nameAP2A2
Model size1587
KEGG koko:K11824
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000323,GO:0000331,GO:0000910,GO:0001775,GO:0002064,GO:0002065,GO:0002066,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0002682,GO:0003006,GO:0003674,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005798,GO:0005829,GO:0005886,GO:0005905,GO:0005938,GO:0006109,GO:0006807,GO:0006810,GO:0006884,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006898,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0008021,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008356,GO:0008361,GO:0008565,GO:0009056,GO:0009057,GO:0009628,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009992,GO:0010008,GO:0010324,GO:0010556,GO:0010558,GO:0010605,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0012510,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016055,GO:0016192,GO:0016323,GO:0016324,GO:0016482,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019884,GO:0019886,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030100,GO:0030104,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030130,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030141,GO:0030154,GO:0030163,GO:0030175,GO:0030276,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030667,GO:0030669,GO:0030674,GO:0030707,GO:0030855,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0032153,GO:0032433,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032535,GO:0032794,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032881,GO:0032885,GO:0032940,GO:0032991,GO:0033036,GO:0034381,GO:0034383,GO:0034613,GO:0034622,GO:0035091,GO:0035567,GO:0035615,GO:0036019,GO:0036020,GO:0036062,GO:0036090,GO:0036230,GO:0036465,GO:0038024,GO:0042119,GO:0042592,GO:0042734,GO:0042886,GO:0042995,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045177,GO:0045184,GO:0045202,GO:0045321,GO:0045334,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045807,GO:0045912,GO:0046903,GO:0046907,GO:0048002,GO:0048013,GO:0048193,GO:0048259,GO:0048260,GO:0048268,GO:0048468,GO:0048475,GO:0048477,GO:0048488,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050690,GO:0050750,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051285,GO:0051286,GO:0051301,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0060071,GO:0060090,GO:0060255,GO:0060284,GO:0060429,GO:0060627,GO:0061024,GO:0061640,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070325,GO:0070382,GO:0070727,GO:0070820,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072583,GO:0080090,GO:0090066,GO:0090175,GO:0097006,GO:0097060,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0097718,GO:0098588,GO:0098590,GO:0098657,GO:0098748,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098858,GO:0099003,GO:0099024,GO:0099503,GO:0099504,GO:0099568,GO:0099738,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120038,GO:0198738,GO:1900125,GO:1900126,GO:1901532,GO:1901564,GO:1901565,GO:1901575,GO:1902036,GO:1902410,GO:1903047,GO:1903706,GO:1905114,GO:1905330,GO:1990386,GO:2000026,GO:2000027,GO:2000736
Exons6
EggNOG free text desc.intracellular protein transport
EggNOG OGsCOG4354@1,KOG1077@2759
Ec32 ortholog descriptionClathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
Ec32 orthologEc-05_005860.1
Cds size933
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig944.17477.1prot_E_fasciculatus_S2_contig944.17477.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig944 7384..10507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842592.4950995-CDS-E_fasciculatus_S2_contig944:7383..75661696842592.4950995-CDS-E_fasciculatus_S2_contig944:7383..7566Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig944 7384..7566 +
1696842592.5086186-CDS-E_fasciculatus_S2_contig944:7971..80761696842592.5086186-CDS-E_fasciculatus_S2_contig944:7971..8076Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig944 7972..8076 +
1696842592.5188704-CDS-E_fasciculatus_S2_contig944:8355..84481696842592.5188704-CDS-E_fasciculatus_S2_contig944:8355..8448Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig944 8356..8448 +
1696842592.5295491-CDS-E_fasciculatus_S2_contig944:8712..88231696842592.5295491-CDS-E_fasciculatus_S2_contig944:8712..8823Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig944 8713..8823 +
1696842592.550447-CDS-E_fasciculatus_S2_contig944:9639..97841696842592.550447-CDS-E_fasciculatus_S2_contig944:9639..9784Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig944 9640..9784 +
1696842592.5649266-CDS-E_fasciculatus_S2_contig944:10211..105071696842592.5649266-CDS-E_fasciculatus_S2_contig944:10211..10507Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig944 10212..10507 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842592.5752478-UTR-E_fasciculatus_S2_contig944:10507..111611696842592.5752478-UTR-E_fasciculatus_S2_contig944:10507..11161Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig944 10508..11161 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig944.17477.1

>prot_E_fasciculatus_S2_contig944.17477.1 ID=prot_E_fasciculatus_S2_contig944.17477.1|Name=mRNA_E_fasciculatus_S2_contig944.17477.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=311bp
MGGPPADGYGAGGMLEGGGGGGFSGQGAVGVPPEMQAQVSAWLRSLMVSD
KGILFEGGPIKIGVVHEYRSSQGRLTLYLYNLAAAPLTDLRLGVPSVPYL
RSQIGQGPPGLDVGGRAQQVLMCECLQPFSEAPALSVSFLLEGRPHSFEL
TLPLSVCSFIEPLQLEAEDFARRWEMLGNASKEENGEVWAGAPVTAARWA
EVRGMVTSAMKMGITEGPDSTSNSNDSGTTLRAAGTLRTGSLTPQGHKIS
LGAMLRLEVEPASGTFRISVRAVHVTVAVALRQMLTSQLDGSSGGGGAVG
EIVGAGGVGA*
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mRNA from alignment at E_fasciculatus_S2_contig944:7384..11161+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig944.17477.1 ID=mRNA_E_fasciculatus_S2_contig944.17477.1|Name=mRNA_E_fasciculatus_S2_contig944.17477.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3778bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig944:7384..11161+ (Ectocarpus fasciculatus EfasUO2)
ATGGGAGGCCCTCCAGCAGACGGGTACGGCGCGGGGGGCATGCTGGAGGG TGGAGGAGGGGGGGGATTCTCGGGACAAGGAGCGGTGGGGGTCCCGCCCG AGATGCAGGCGCAAGTGTCGGCTTGGCTGAGGTCGCTGATGGTCAGCGAT AAGGGAATACTGTTCGAGGGTGGTCCGATTAAGGTGAAGAGAAGGAGATG AGGCCAACCCACTCTTGTCAAGGTTGTGTGTCAAAGCAGGGAGTCTTGGC GTGCCAAAGAGAGTGGAACGCAGAGACAAGGAGCGGCATGGACACAGGAA GGCTTCTAGTGGTTCGCCAACCTCAGGAGCTGCCACTACGTTGAGCCTTT TGTTCTAGTGGGTACCTCGGTTTCCTTCGCTCTCCCCCTCGAAGTTCTCA GCGGAGTGTTCTCGGTCGGGGCGGCTTTGTTTTGAACCTGAAAGTATCGG AACAACGTGCATGTATCACATCATCAGTGTAGCCCCCTGATTTGTCTCGG TATCCCACTCCTCCCCCACGTGTTGGTTTTCTCTGTCTAAACACGCCTCT GTTGGTGTTTTCCCTCTCATAACCTCTCTTTTTGTCAGATCGGAGTCGTC CACGAGTACCGGTCATCCCAGGGGCGGTTGACGCTCTACCTCTACAACCT GGCGGCCGCGCCTTTGACGGACTTGCGGCTGGGCGTTCCTTCGGTACGCG GAAATTGTGGCTGACTGTTGCTGTTGGTGTGTGTCGTATTTCTCTGCAGA CTCTGTTTCCACATGGATTGATGGGCACCTCTTTCCGCAAAAATGTCGTT TTTTGGTGGACAGACGCCGTCCATCTAGTGCGTCATGCCATCATTTTGTA TTTTCAAGCTTTTGAACTTTTCGGGGCTGAAACCTGTGCTGCTTAGCGTA CTGCAGTAGCTAAACAGGCGTTTCCCCGCCTGCTTTCCGTGTCTAACCGT CTCTATTCGTCTTGCTGTATAGGTGCCATATCTCCGATCTCAAATCGGGC AAGGCCCTCCTGGGCTGGACGTGGGCGGTAGGGCCCAGCAGGTCCTGATG TGCGAGTGTCTACAGGTGGGCGTTGTTGCTGCTGTTTCTGTTTCTGTTTC TGCTGCCACTGCTGTCGTTGGAGACTGCTATGCATGTGGTCGTTGTATCT CTGCGGCTTTTGCCTGAAGAATGTGCGTTCAACGTGGCGGACTGCCATGC CGAAGGGCGCCTTGTTCATACCGTGTCTCCCCACCTTTTGTTGTCATGAT ACTCACGGCTACACGTTCACGACAATGGCGGCGCCGACGGCCACGACGAC GACCACGACGGCGGCGGCAACATTCTCAGCCGTTCTCGGAAGCCCCGGCT TTGTCGGTTTCGTTCCTGTTGGAGGGCAGGCCTCACTCCTTCGAACTCAC TCTTCCCCTGTCGGTGTGCAGCTTCATCGAACCACTTCAGGTGGGTACCC CGACCGTGTATATGGATGTTTTCCAAGCCGTAGCCCCCCCCTGGTAGAGT TGATACGGGGAAGAGCCACCAAGTGCTGTCCGGAAATGAAGTTTCACTTC GTACACATTTCGGTATTTTTTTGCTACACGGCTAGGGGCTTAACGATCCA TCCGTTGTAGGCGGTGCCGACGTTTGGCACTGTGACAAAGCTCGAATAAG GTGGGCTGCGCGTTTGTCCCCATCTATTTGGTCGCCAGTCTGAACGTGTG GGGGTATTTTTTTGACGCGCCAGCAGGATCACGCAGAAGGAGTTGTCACT CCCCAATGCCGTTCTTGCCCATCAATCGTTTTACGCGAGAAAGGTTGAGC GGTCGTTTCCCGTCTCATGCTATGTGTGCATGCTCACGGCAATGCATGCG TTTTTCACTCGTACACTATTGTTTTTTTCACTTGAGAGGTTCGGAACCAC AACCTAGGGGACGAACTGAACCATTCAGCTACTGCTGTTGCTTGACCGAG CTCACGTTGGCGCATATGCGATCGATCCCTTTTCGTTTCGCCGGGACACC TGTTCTCGTGAAACCTAGAGTTTGAACGCGCTCGTTTTTTTTTCATGGCG GTTTGTCCGGGCTCGGGTGTTCATCCTGCCGTGGCTGCTTTCAGACGGCT GCCGAGTTCGTTTGGGAGGGTACACGTCACTCCATGTGGAGTGCTACACG TAGAAAACATGCCTTTTTTCAGATTACACCACCGTCAGCCTCTTCGAAAC GCACCCCTGCCTCGCGTCACCTTTGACCGTTGCGAAACCTACGGCATCTG CTACAGCTGGAAGCGGAGGACTTCGCGCGGCGATGGGAGATGCTAGGGAA CGCTTCGAAAGAGGAGAATGGGGAGGTCTGGGCGGGAGCACCGGTAACGG CCGCACGGTGGGCCGAGGTTCGCGGCATGGTCACGTCGGCGATGAAGATG GGTGAGCGTGCATGTGGTTGGCTGGGGAACGGGTTCGTTGTTGTTTTCAA GCGTGGGGCAATTCGGTCCATCCTGTGGGAAATGATCGGGACATGAATCC TTGGTGTCACCGTTGTATGCCATTTGTGTTGACGGGAGAGAGGCATGGGT TGTCGTATTTCGTAGGGGGACAGGTCGAACTGGAACAAGTGTGCTCCGAC GGGGGGACGGGGGACAAGGCGAAGCACAGCTGCCATCATACCCGACGTTG ACGTCATGGCCAAGTTTCACCTTTCGGAGGGTAGGAAACGGACCATTTCC TCTTCTGCAGCAATTCTCACCACAACACCCCAGCCTTACACCTCTCCTTT GAAGCGAAGCTATGTCGCATCATGCCCCCTCTCTCGCCCACACGCCCGGA CGGTTTGTCGGAACCCTTTCCGTTGCAGGGATTACGGAGGGGCCTGATTC TACCTCCAACAGTAACGACAGCGGGACCACCTTGCGAGCGGCCGGCACTC TCCGAACCGGCTCGCTCACCCCGCAGGGGCACAAGATTTCCCTCGGGGCG ATGCTGCGCCTGGAGGTCGAGCCGGCCTCCGGAACATTCCGGATTTCGGT CCGCGCGGTCCACGTGACGGTTGCCGTCGCTCTCCGGCAGATGTTGACCT CTCAGCTCGATGGCAGCAGCGGGGGTGGCGGGGCGGTCGGGGAAATCGTG GGCGCCGGTGGGGTGGGGGCTTAAGAGTGTTGGCCTTGGTGCGGGCGACG GGCGGACATTGGCCGGTTGCGTTTTGTCTTGCCCTGTCTCCTGGCGTATC TCTCTGTATGAAATATGTAAGGTGCTGTCTTTGTTTTGTACCAGGTGAAC GGTTCTTCAGTCCATGTAGATGCGGTTGTTGCGGTTGTTTGGCCCCGGCC TGTGTTTTGGTTGTTCTTGAAGCGCTACATGTAGCATGTATTGTGTGGTG TTGCTCCTCTTGAGCGCTACAGCAGAAGACAACCTGAGTCCCATCGAAGC GCGGCGGACACGCTCCAGAGCGATGGGCGTCGCCGACGCGCTTTTTGCCT TTGGGCACGATGTATGTTTTCTGGGTCGAATACTCTTCTCGTTTTCGTAT ATTTGGTTCCGGTTCCGCCCCGTACTCTAGCCAAAGTCGATCTTGTAAAT TGATTCGAGCACTGGCGGTGCAGCTTTGCAGCATGAAAAGGGTGTAGGTT CAAAGCAGTAGGCAAGAATTTTCCGTTTTGTTGTTTCATTTCGAGTGAGG GGCAAAAGCTCGGTTCCCTTCTCTCGCAGCACCTGCGAATGACAAACGTT TAACGTAACCCCCACATACCTCCCGCAATCGAGGGGAAGAAATGCATGTG TACTGCCGTGAACCTATGCACCACAGGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig944:7384..11161+

>mRNA_E_fasciculatus_S2_contig944.17477.1 ID=mRNA_E_fasciculatus_S2_contig944.17477.1|Name=mRNA_E_fasciculatus_S2_contig944.17477.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=933bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig944:7384..11161+ (Ectocarpus fasciculatus EfasUO2)
ATGGGAGGCCCTCCAGCAGACGGGTACGGCGCGGGGGGCATGCTGGAGGG
TGGAGGAGGGGGGGGATTCTCGGGACAAGGAGCGGTGGGGGTCCCGCCCG
AGATGCAGGCGCAAGTGTCGGCTTGGCTGAGGTCGCTGATGGTCAGCGAT
AAGGGAATACTGTTCGAGGGTGGTCCGATTAAGATCGGAGTCGTCCACGA
GTACCGGTCATCCCAGGGGCGGTTGACGCTCTACCTCTACAACCTGGCGG
CCGCGCCTTTGACGGACTTGCGGCTGGGCGTTCCTTCGGTGCCATATCTC
CGATCTCAAATCGGGCAAGGCCCTCCTGGGCTGGACGTGGGCGGTAGGGC
CCAGCAGGTCCTGATGTGCGAGTGTCTACAGCCGTTCTCGGAAGCCCCGG
CTTTGTCGGTTTCGTTCCTGTTGGAGGGCAGGCCTCACTCCTTCGAACTC
ACTCTTCCCCTGTCGGTGTGCAGCTTCATCGAACCACTTCAGCTGGAAGC
GGAGGACTTCGCGCGGCGATGGGAGATGCTAGGGAACGCTTCGAAAGAGG
AGAATGGGGAGGTCTGGGCGGGAGCACCGGTAACGGCCGCACGGTGGGCC
GAGGTTCGCGGCATGGTCACGTCGGCGATGAAGATGGGGATTACGGAGGG
GCCTGATTCTACCTCCAACAGTAACGACAGCGGGACCACCTTGCGAGCGG
CCGGCACTCTCCGAACCGGCTCGCTCACCCCGCAGGGGCACAAGATTTCC
CTCGGGGCGATGCTGCGCCTGGAGGTCGAGCCGGCCTCCGGAACATTCCG
GATTTCGGTCCGCGCGGTCCACGTGACGGTTGCCGTCGCTCTCCGGCAGA
TGTTGACCTCTCAGCTCGATGGCAGCAGCGGGGGTGGCGGGGCGGTCGGG
GAAATCGTGGGCGCCGGTGGGGTGGGGGCTTAA
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