mRNA_E_fasciculatus_S2_contig933.17387.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI) HSP 1 Score: 556 bits (1434), Expect = 1.950e-197 Identity = 325/368 (88.32%), Postives = 330/368 (89.67%), Query Frame = 1
Query: 1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVEKVTEAGKEEEAGEXXXXXXXXX--AKKRKPRPLIRQQLNKLKEEAKAEXXXXXXXXXXXXXXXXXXXXXXXXXSENEEPNVGGDSGREGAGRKVKXXXAISPKAASGSAGKKRRKTGV 1098
MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYK+FKDRR+LLSQFDLFLADDRILPMLTK LGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLM GVAAVVEKIPRKWKNVKAINIKCS+SVALPVYSN+GDLPPAP +K T AGKEE AGE AKKRKPRPLIRQQLNKLKEEAKAE XXXXXXXXXXXXXXXX ENEEPNVGGDS REGAGRKVK AISPKAASGSAG RRKT V
Sbjct: 1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAP---SAKKATVAGKEEAAGEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAEKAASTAEAXXXXXXXXXXXXXXXX--ENEEPNVGGDSAREGAGRKVKKIKAISPKAASGSAGN-RRKTSV 362
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.520e-60 Identity = 104/227 (45.81%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 34 AARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMA-EKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNV 711
A +ALL A ++ L + E +L QI+L +IPG+ KP+ +++PHP+ DC MCL +K K +K + E PVEGL KII LDKLRT Y F RR+LL+ +DLFLAD+RILPML K LGKTF KKQP+P+ + R S ++ RARDS L+ G C AV + NT+MT ++V N++A ++ +E IPRKWKN++AI +K ++S++LP+++ +
Sbjct: 66 AVKALLAFHKKKAESERKLPGADDERILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFNKL 292
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.980e-56 Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 1
Query: 43 ALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMA-EKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNV 711
ALL + + A L+ E E V I L K+P KP+ + + HPL DCDMCL +K K W+KE+ E +PV GL K+I LDKLRT Y F+ RR+L+S +DLFLADDRILPML K LGKTF KKQPVP+++ RR + + I RARDS +LV G+ +V + NTSMT Q+VENL+A V+ IPRKW NV+AI IK +SVALPV + +
Sbjct: 5 ALLSYHEKAHAAGGDLLGSE-ERVHVTIVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKL 225
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.300e-53 Identity = 104/256 (40.62%), Postives = 155/256 (60.55%), Query Frame = 1
Query: 10 FDEAQVRRAARALLKHVNSSAAG--KQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVEKVTEAGK 771
DEAQVR+A AL ++ KQ LIE E + + I KIP KP+PI +PH +RK+ + MCL+VKD K +K++ +++PVEGLTK++ L KLR + F+DRR L+ +DLFLADDRILP L +GK F++VKKQPVP+++ R A+F + + F+ S G C +++A+ M+ DQ+VEN+M G+ I +KW ++AI++K + SVALP+Y + P + + GK
Sbjct: 9 MDEAQVRKAVIALQIYIEKQKKDRTKQQLIE-ENQSLSCIIQRKKIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-ANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIYYSPISFTKLPAIRSSQSDASVGK 260
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.020e-52 Identity = 111/253 (43.87%), Postives = 154/253 (60.87%), Query Frame = 1
Query: 13 DEAQVRRAARALLKH------VNSSAAGKQSLIEDE-GEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKR-----EDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKL--------ERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNV 711
D Q RA ALL+H + +S KQ L+ E G+ +L QI+L KIP V KPVP+++PHPL ED +CLIVK++ K ++ ++G+ +++ L +LRT YKEF++RRQL FDLFL DDRILP+L K LGKTF KK PV +KL + A+ K+I A+ L +HG+C +VK+A TS + V N++AG+ A VE P KWKNV AI++K S+SVALP+Y +
Sbjct: 55 DATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.200e-51 Identity = 100/233 (42.92%), Postives = 146/233 (62.66%), Query Frame = 1
Query: 10 FDEAQVRRAARALLKHVNSSAA--GKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVY 702
DEAQVR+A AL + KQ LIE E + I K+P KP+PI +PH +RK+ + MCL+VKD K +K++ +++PVEGLTK++ L KLR + F+DRR L+ +DLFLADDRILP L +GK F++VKKQPVP+++ R A F + + F+ S G C V++A+ M+ D++VEN+M G+ I +KW ++AI++K + SVALP+Y
Sbjct: 9 MDEAQVRKAVLALQIYTEKQKLEQNKQPLIE-ENVSLSCIIQRKKVPSKASLKPIPIELPHGIRKQSE--MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGACMNVRIAHLGMSVDEIVENIMIGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RBE1_9CHLO) HSP 1 Score: 182 bits (461), Expect = 1.430e-51 Identity = 101/242 (41.74%), Postives = 154/242 (63.64%), Query Frame = 1
Query: 10 FDEAQVRRAARALLKHVNSSAAGKQS--LIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDN-------AKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSN 708
++QVR+A ALLKH+ +AGK++ L ED+ ++ ++L + P KP+ I IP+PL E ++CL VKD+ AK IK MA G+ K+I + KL+ Y F+ +R+L Q+DLFLADDRILP L K++GKTF K KKQP+P+ L+++ + QI A ++ + S G C V++A +S ED++V+N+MA + + +PRKWKNV+A+ +K + SVALP+YS+
Sbjct: 7 LSKSQVRKAVAALLKHIAKQSAGKKNSQLFEDD-QIFNLVVALKRTPDQASNKPIRIEIPNPLHSAEGAEVCLFVKDHKGEGHKAAKERIKSMANS----GVAKVIGMSKLKANYFTFEAKRKLCDQYDLFLADDRILPSLPKLIGKTFFKKKKQPIPVDLKKK-DWGLQIKMAVNATYTFQSEGSCMNVRVARSSQEEDEIVDNIMAVAEQLGDVVPRKWKNVQALYLKTNESVALPIYSS 242
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.010e-51 Identity = 104/259 (40.15%), Postives = 160/259 (61.78%), Query Frame = 1
Query: 10 FDEAQVRRAARALLKHVNS--SAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVEKVTEAGKEEE 780
D QVR+A AL + + S KQ+L+ED +V+ + + +P KPVPIA+P+ +R D ++CL VKD+ K IK + +P+ GLTK++ + KL+ + +FKD+R+L + +DLFLADDRILP L +LGKTF KKQP + + + + + I R + S G C+ VK+A+ M ++++EN++ G +VE +P+KWKN+K+INIK S+SVALP+Y+++ + P K KV EA EE
Sbjct: 5 LDAEQVRKAVVALKQFIQKKKSQNSKQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIRG--DGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYNSLPNSSKLPTDIKKRKVEEASSAEE 260
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQX0_CHLVA) HSP 1 Score: 180 bits (457), Expect = 3.150e-51 Identity = 104/237 (43.88%), Postives = 156/237 (65.82%), Query Frame = 1
Query: 25 VRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKA-KPVPIAIPHPLRKREDCDMCLIVKDN---AKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLP 723
VR+A +ALLK S K SL+E++ E++ I+L K+P + KP+ I IPHP+ E+ ++CL VKD+ K +E V G++K++ L KLRT+Y+ + +RQL + +D+F AD+RILP L K+LGK F K KKQPVP++L + +A QI RA ++ +L S G+ A+K+A +S +E Q VEN +A +AA VEK+PRKW V+A+ +K ++SVALP+Y + D P
Sbjct: 12 VRKAVKALLKF--SRGEDKNSLLEED-ELLYLVIALKKVPQKPRHDKPIRIPIPHPIYVAENAEVCLFVKDHKGEGHKAAKSKVREERVAGISKVVGLSKLRTKYESHEAKRQLCNSYDMFAADERILPSLPKLLGKAFFKKKKQPVPVRLTGK-DWAGQIRRACEATYLFWSGGNSLAIKVARSSQSEQQGVENTLAAIAAAVEKVPRKWDGVQAVFLKTADSVALPMYQVLPDAP 244
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z072_HAELA) HSP 1 Score: 180 bits (456), Expect = 5.600e-51 Identity = 101/251 (40.24%), Postives = 156/251 (62.15%), Query Frame = 1
Query: 1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIP-GDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKE----MAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRV 738
+ + QV RA +L K V S A SL++DE EV Q++L K+P + K KP+ + +PHP E ++CL VKD+A K +A+ E G+TK+I L KLRT+Y+ F+ +R+L +DLFLAD+R+LP L K++GK+F K KKQP+PIK+ A F Q+ +A + ++ G C +K+A +S + +VEN+ A + VE +P+KW NV+A+ +K ++SVALP++ + D PA R+
Sbjct: 9 LAGWSSQQVERAVASLQKFVGSRQAASTSLLDDEDEVFYMQLALKKMPMRERKDKPIALPLPHPFVSAEGAEICLFVKDHAGEGHKSAKLMLAKLEKKGGVTKVIGLSKLRTKYESFESKRELCKLYDLFLADERVLPSLPKLIGKSFFKKKKQPIPIKVTA-ADFPAQVQKACSATYMFSHAGTCINIKVALSSQSTAHIVENIHAVLVKAVEHVPKKWSNVQAVFLKTADSVALPLFQCLPD--PAARI 256 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig933.17387.1 >prot_E_fasciculatus_S2_contig933.17387.1 ID=prot_E_fasciculatus_S2_contig933.17387.1|Name=mRNA_E_fasciculatus_S2_contig933.17387.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=370bp MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDback to top mRNA from alignment at E_fasciculatus_S2_contig933:11899..13813- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig933.17387.1 ID=mRNA_E_fasciculatus_S2_contig933.17387.1|Name=mRNA_E_fasciculatus_S2_contig933.17387.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1915bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig933:11899..13813- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig933:11899..13813- >mRNA_E_fasciculatus_S2_contig933.17387.1 ID=mRNA_E_fasciculatus_S2_contig933.17387.1|Name=mRNA_E_fasciculatus_S2_contig933.17387.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1110bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig933:11899..13813- (Ectocarpus fasciculatus EfasUO2)back to top |