mRNA_E_fasciculatus_S2_contig933.17387.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig933.17387.1
Unique NamemRNA_E_fasciculatus_S2_contig933.17387.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI)

HSP 1 Score: 556 bits (1434), Expect = 1.950e-197
Identity = 325/368 (88.32%), Postives = 330/368 (89.67%), Query Frame = 1
Query:    1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVEKVTEAGKEEEAGEXXXXXXXXX--AKKRKPRPLIRQQLNKLKEEAKAEXXXXXXXXXXXXXXXXXXXXXXXXXSENEEPNVGGDSGREGAGRKVKXXXAISPKAASGSAGKKRRKTGV 1098
            MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYK+FKDRR+LLSQFDLFLADDRILPMLTK LGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLM GVAAVVEKIPRKWKNVKAINIKCS+SVALPVYSN+GDLPPAP     +K T AGKEE AGE           AKKRKPRPLIRQQLNKLKEEAKAE        XXXXXXXXXXXXXXXX  ENEEPNVGGDS REGAGRKVK   AISPKAASGSAG  RRKT V
Sbjct:    1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAP---SAKKATVAGKEEAAGEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAEKAASTAEAXXXXXXXXXXXXXXXX--ENEEPNVGGDSAREGAGRKVKKIKAISPKAASGSAGN-RRKTSV 362          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.520e-60
Identity = 104/227 (45.81%), Postives = 150/227 (66.08%), Query Frame = 1
Query:   34 AARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMA-EKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNV 711
            A +ALL      A  ++ L   + E +L QI+L +IPG+   KP+ +++PHP+    DC MCL +K   K  +K +  E  PVEGL KII LDKLRT Y  F  RR+LL+ +DLFLAD+RILPML K LGKTF   KKQP+P+ + R  S   ++ RARDS  L+   G C AV + NT+MT  ++V N++A  ++ +E IPRKWKN++AI +K ++S++LP+++ +
Sbjct:   66 AVKALLAFHKKKAESERKLPGADDERILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFNKL 292          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.980e-56
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 1
Query:   43 ALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMA-EKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNV 711
            ALL +   + A    L+  E E V   I L K+P     KP+ + + HPL    DCDMCL +K   K W+KE+  E +PV GL K+I LDKLRT Y  F+ RR+L+S +DLFLADDRILPML K LGKTF   KKQPVP+++ RR +  + I RARDS +LV   G+  +V + NTSMT  Q+VENL+A     V+ IPRKW NV+AI IK  +SVALPV + +
Sbjct:    5 ALLSYHEKAHAAGGDLLGSE-ERVHVTIVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKL 225          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.300e-53
Identity = 104/256 (40.62%), Postives = 155/256 (60.55%), Query Frame = 1
Query:   10 FDEAQVRRAARALLKHVNSSAAG--KQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVEKVTEAGK 771
             DEAQVR+A  AL  ++        KQ LIE E + +   I   KIP     KP+PI +PH +RK+ +  MCL+VKD  K  +K++ +++PVEGLTK++ L KLR  +  F+DRR L+  +DLFLADDRILP L   +GK F++VKKQPVP+++ R A+F + +       F+  S G C  +++A+  M+ DQ+VEN+M G+      I +KW  ++AI++K + SVALP+Y +       P +   +     GK
Sbjct:    9 MDEAQVRKAVIALQIYIEKQKKDRTKQQLIE-ENQSLSCIIQRKKIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-ANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIYYSPISFTKLPAIRSSQSDASVGK 260          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.020e-52
Identity = 111/253 (43.87%), Postives = 154/253 (60.87%), Query Frame = 1
Query:   13 DEAQVRRAARALLKH------VNSSAAGKQSLIEDE-GEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKR-----EDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKL--------ERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNV 711
            D  Q  RA  ALL+H      + +S   KQ L+  E G+ +L QI+L KIP  V  KPVP+++PHPL        ED  +CLIVK++ K  ++       ++G+ +++ L +LRT YKEF++RRQL   FDLFL DDRILP+L K LGKTF   KK PV +KL        +  A+  K+I  A+    L  +HG+C +VK+A TS    + V N++AG+ A VE  P KWKNV AI++K S+SVALP+Y  +
Sbjct:   55 DATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.200e-51
Identity = 100/233 (42.92%), Postives = 146/233 (62.66%), Query Frame = 1
Query:   10 FDEAQVRRAARALLKHVNSSAA--GKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVY 702
             DEAQVR+A  AL  +         KQ LIE E   +   I   K+P     KP+PI +PH +RK+ +  MCL+VKD  K  +K++ +++PVEGLTK++ L KLR  +  F+DRR L+  +DLFLADDRILP L   +GK F++VKKQPVP+++ R A F + +       F+  S G C  V++A+  M+ D++VEN+M G+      I +KW  ++AI++K + SVALP+Y
Sbjct:    9 MDEAQVRKAVLALQIYTEKQKLEQNKQPLIE-ENVSLSCIIQRKKVPSKASLKPIPIELPHGIRKQSE--MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGACMNVRIAHLGMSVDEIVENIMIGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RBE1_9CHLO)

HSP 1 Score: 182 bits (461), Expect = 1.430e-51
Identity = 101/242 (41.74%), Postives = 154/242 (63.64%), Query Frame = 1
Query:   10 FDEAQVRRAARALLKHVNSSAAGKQS--LIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDN-------AKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSN 708
              ++QVR+A  ALLKH+   +AGK++  L ED+ ++    ++L + P     KP+ I IP+PL   E  ++CL VKD+       AK  IK MA      G+ K+I + KL+  Y  F+ +R+L  Q+DLFLADDRILP L K++GKTF K KKQP+P+ L+++  +  QI  A ++ +   S G C  V++A +S  ED++V+N+MA    + + +PRKWKNV+A+ +K + SVALP+YS+
Sbjct:    7 LSKSQVRKAVAALLKHIAKQSAGKKNSQLFEDD-QIFNLVVALKRTPDQASNKPIRIEIPNPLHSAEGAEVCLFVKDHKGEGHKAAKERIKSMANS----GVAKVIGMSKLKANYFTFEAKRKLCDQYDLFLADDRILPSLPKLIGKTFFKKKKQPIPVDLKKK-DWGLQIKMAVNATYTFQSEGSCMNVRVARSSQEEDEIVDNIMAVAEQLGDVVPRKWKNVQALYLKTNESVALPIYSS 242          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.010e-51
Identity = 104/259 (40.15%), Postives = 160/259 (61.78%), Query Frame = 1
Query:   10 FDEAQVRRAARALLKHVNS--SAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVEKVTEAGKEEE 780
             D  QVR+A  AL + +    S   KQ+L+ED  +V+    + + +P     KPVPIA+P+ +R   D ++CL VKD+ K  IK   + +P+ GLTK++ + KL+  + +FKD+R+L + +DLFLADDRILP L  +LGKTF   KKQP  + +  + + +  I R      +  S G C+ VK+A+  M  ++++EN++ G   +VE +P+KWKN+K+INIK S+SVALP+Y+++ +    P   K  KV EA   EE
Sbjct:    5 LDAEQVRKAVVALKQFIQKKKSQNSKQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIRG--DGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYNSLPNSSKLPTDIKKRKVEEASSAEE 260          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQX0_CHLVA)

HSP 1 Score: 180 bits (457), Expect = 3.150e-51
Identity = 104/237 (43.88%), Postives = 156/237 (65.82%), Query Frame = 1
Query:   25 VRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKA-KPVPIAIPHPLRKREDCDMCLIVKDN---AKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLP 723
            VR+A +ALLK   S    K SL+E++ E++   I+L K+P   +  KP+ I IPHP+   E+ ++CL VKD+        K    +E V G++K++ L KLRT+Y+  + +RQL + +D+F AD+RILP L K+LGK F K KKQPVP++L  +  +A QI RA ++ +L  S G+  A+K+A +S +E Q VEN +A +AA VEK+PRKW  V+A+ +K ++SVALP+Y  + D P
Sbjct:   12 VRKAVKALLKF--SRGEDKNSLLEED-ELLYLVIALKKVPQKPRHDKPIRIPIPHPIYVAENAEVCLFVKDHKGEGHKAAKSKVREERVAGISKVVGLSKLRTKYESHEAKRQLCNSYDMFAADERILPSLPKLLGKAFFKKKKQPVPVRLTGK-DWAGQIRRACEATYLFWSGGNSLAIKVARSSQSEQQGVENTLAAIAAAVEKVPRKWDGVQAVFLKTADSVALPMYQVLPDAP 244          
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z072_HAELA)

HSP 1 Score: 180 bits (456), Expect = 5.600e-51
Identity = 101/251 (40.24%), Postives = 156/251 (62.15%), Query Frame = 1
Query:    1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIP-GDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKE----MAEKEPVEGLTKIIKLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRV 738
            +  +   QV RA  +L K V S  A   SL++DE EV   Q++L K+P  + K KP+ + +PHP    E  ++CL VKD+A    K     +A+ E   G+TK+I L KLRT+Y+ F+ +R+L   +DLFLAD+R+LP L K++GK+F K KKQP+PIK+   A F  Q+ +A  + ++    G C  +K+A +S +   +VEN+ A +   VE +P+KW NV+A+ +K ++SVALP++  + D  PA R+
Sbjct:    9 LAGWSSQQVERAVASLQKFVGSRQAASTSLLDDEDEVFYMQLALKKMPMRERKDKPIALPLPHPFVSAEGAEICLFVKDHAGEGHKSAKLMLAKLEKKGGVTKVIGLSKLRTKYESFESKRELCKLYDLFLADERVLPSLPKLIGKSFFKKKKQPIPIKVTA-ADFPAQVQKACSATYMFSHAGTCINIKVALSSQSTAHIVENIHAVLVKAVEHVPKKWSNVQAVFLKTADSVALPLFQCLPD--PAARI 256          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig933.17387.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.950e-19788.32protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3... [more]
Hypothetical2.520e-6045.81protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.980e-5650.45protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Uncharacterized1.300e-5340.63protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... [more]
Uncharacterized4.020e-5243.87protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Uncharacterized1.200e-5142.92protein AlNc14C340G10778 n=1 Tax=Albugo laibachii ... [more]
Hypothetical1.430e-5141.74protein n=1 Tax=Pyramimonas obovata TaxID=1411642 ... [more]
Uncharacterized3.010e-5140.15protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized3.150e-5143.88protein n=1 Tax=Chlorella variabilis TaxID=554065 ... [more]
Uncharacterized5.600e-5140.24protein (Fragment) n=2 Tax=Haematococcus lacustris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig933contigE_fasciculatus_S2_contig933:11899..13813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score560.5
Seed ortholog evalue6e-157
Seed eggNOG ortholog2880.D7G5C3
Preferred nameRSL1D1
Model size1110
KEGG koko:K11824,ko:K14775
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032879,GO:0032880,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0042981,GO:0043043,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090342,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000772
Exons2
EggNOG free text desc.regulation of cellular senescence
EggNOG OGsKOG1685@1,KOG1685@2759
Ec32 ortholog descriptionRibosomal protein L1-like
Ec32 orthologEc-14_006980.1
Cds size1110
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842582.9561298-CDS-E_fasciculatus_S2_contig933:11898..127141696842582.9561298-CDS-E_fasciculatus_S2_contig933:11898..12714Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig933 11899..12714 -
1696842582.976276-CDS-E_fasciculatus_S2_contig933:13519..138131696842582.976276-CDS-E_fasciculatus_S2_contig933:13519..13813Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig933 13520..13813 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig933.17387.1prot_E_fasciculatus_S2_contig933.17387.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig933 11899..13813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig933.17387.1

>prot_E_fasciculatus_S2_contig933.17387.1 ID=prot_E_fasciculatus_S2_contig933.17387.1|Name=mRNA_E_fasciculatus_S2_contig933.17387.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=370bp
MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGD
VKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKII
KLDKLRTQYKEFKDRRQLLSQFDLFLADDRILPMLTKVLGKTFLKVKKQP
VPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENL
MAGVAAVVEKIPRKWKNVKAINIKCSNSVALPVYSNVGDLPPAPRVEKVE
KVTEAGKEEEAGEGEGKESNSQAKKRKPRPLIRQQLNKLKEEAKAEKAAA
AAEAATAGSGAKGNKGKKRAASENEEPNVGGDSGREGAGRKVKKIKAISP
KAASGSAGKKRRKTGVVVG*
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mRNA from alignment at E_fasciculatus_S2_contig933:11899..13813-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig933.17387.1 ID=mRNA_E_fasciculatus_S2_contig933.17387.1|Name=mRNA_E_fasciculatus_S2_contig933.17387.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1915bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig933:11899..13813- (Ectocarpus fasciculatus EfasUO2)
ATGGTTAGCTTCGACGAAGCTCAAGTACGGCGTGCCGCGAGGGCTCTGCT GAAGCACGTCAACAGCTCCGCCGCGGGGAAGCAGAGTTTGATCGAAGACG AAGGGGAGGTGGTCCTGGCTCAGATATCGCTTCACAAGATCCCTGGAGAC GTCAAGGCCAAGCCGGTCCCGATCGCCATACCGCACCCTCTGCGAAAACG AGAGGACTGCGACATGTGCCTCATCGTGAAGGACAACGCGAAGGTCTGGA TCAAGGAGATGGCGGAGAAGGAACCTGTGGAAGGCCTCACGAAGGTATGA CACAACAGCAGTCAGTGTGATGTCTGGGTGGCGCAGCACACCATCAGCTT GATGGAGCGTGTGTATGTTTTGAAACCCATAAGGCAAGCATTAGAAGCGA CAGCAGTACCCAGAAGCGGGGGAGCTGTACAGCTGTAGAGCCACAGCTGG CCACTCTCAAAAGGAAACGATACAATAATACAATATTGTCGAGCCAACTC CAACACACGTGCAGCCTGTTCGATTGCGGCCGATATGCATAGCATGAACC AGAACCAGAGTGTCCATCGTCCATGCGGTGGAATTACATGTAGACTACCG CTGTATCGTTGTATCAGTGGAGTCCCGTGTGGTTGTACTGCTGTAGTCCG CAGAAGGCTGAGAGCTGAGAGCTAAGAGGTCGAAAACACCCCCTTGATTT TGAAATCAGACAGAGGTTTCCAATAACTCGCCCGCTTTGTGTGGTATGTC CATGGCTACCGTGTGCAGAGGTTGACCCCGATGGCCCTGTTGCTGCTTGA ATATTTTACAAAATGTATCGCGTGTGTCTGTTCCCGGAACGAAGGTCGGT ACTCGGTATTCGGTACTGCTGCCGCATCGTCGTGGGCCTCTCTGTTCTCT TGACTATTGACACTGCTGTTCTATTGTGCTGGCGAACTTGTTTCGCATTT GCTGCTCATGCACTCACACCACACGACACAGCACTTTCAGCCCCCTTCAA CAAATGCTGCCACTGTCTTTTGGCTTCCGCCCGGGAAACACTGATGTATC CTTGATGTATCCTGAATGCTCCCCCCTCCCCGCCCCTCTCCCGGCGCAGA TAATCAAGCTGGACAAACTCCGTACTCAATACAAAGAGTTCAAGGACCGC CGACAGCTTCTGTCGCAGTTCGACCTCTTCCTCGCCGACGACCGAATCCT GCCCATGCTCACCAAGGTCCTCGGCAAGACCTTCCTGAAGGTCAAGAAGC AACCCGTGCCGATAAAGCTCGAGCGCCGAGCGTCTTTCGCCAAGCAGATC GCCCGCGCAAGAGACAGCGCCTTCTTGGTGGGGTCGCACGGGGACTGCTG GGCCGTGAAGCTGGCGAACACGTCCATGACGGAGGACCAGGTGGTGGAGA ACCTCATGGCCGGGGTCGCTGCGGTGGTGGAAAAGATCCCTCGGAAGTGG AAGAACGTCAAGGCCATCAACATCAAGTGCTCCAACTCGGTGGCGCTGCC GGTGTACAGCAATGTCGGCGACCTCCCTCCGGCACCACGCGTGGAGAAGG TGGAGAAGGTGACGGAGGCGGGAAAGGAAGAGGAAGCCGGCGAGGGCGAG GGCAAGGAGTCCAACTCGCAGGCCAAGAAGCGCAAGCCCCGGCCGCTCAT TCGGCAGCAGCTCAACAAACTGAAGGAGGAGGCCAAGGCAGAGAAGGCTG CAGCGGCTGCCGAAGCGGCGACGGCGGGTAGTGGTGCGAAGGGGAACAAG GGGAAGAAGAGGGCAGCATCAGAGAACGAAGAACCAAACGTAGGGGGAGA CAGCGGGCGAGAGGGAGCGGGTAGGAAAGTGAAGAAGATTAAGGCGATTT CCCCCAAGGCGGCCAGCGGGAGTGCGGGCAAGAAGAGGCGAAAAACGGGC GTTGTTGTTGGATGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig933:11899..13813-

>mRNA_E_fasciculatus_S2_contig933.17387.1 ID=mRNA_E_fasciculatus_S2_contig933.17387.1|Name=mRNA_E_fasciculatus_S2_contig933.17387.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1110bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig933:11899..13813- (Ectocarpus fasciculatus EfasUO2)
ATGGTTAGCTTCGACGAAGCTCAAGTACGGCGTGCCGCGAGGGCTCTGCT
GAAGCACGTCAACAGCTCCGCCGCGGGGAAGCAGAGTTTGATCGAAGACG
AAGGGGAGGTGGTCCTGGCTCAGATATCGCTTCACAAGATCCCTGGAGAC
GTCAAGGCCAAGCCGGTCCCGATCGCCATACCGCACCCTCTGCGAAAACG
AGAGGACTGCGACATGTGCCTCATCGTGAAGGACAACGCGAAGGTCTGGA
TCAAGGAGATGGCGGAGAAGGAACCTGTGGAAGGCCTCACGAAGATAATC
AAGCTGGACAAACTCCGTACTCAATACAAAGAGTTCAAGGACCGCCGACA
GCTTCTGTCGCAGTTCGACCTCTTCCTCGCCGACGACCGAATCCTGCCCA
TGCTCACCAAGGTCCTCGGCAAGACCTTCCTGAAGGTCAAGAAGCAACCC
GTGCCGATAAAGCTCGAGCGCCGAGCGTCTTTCGCCAAGCAGATCGCCCG
CGCAAGAGACAGCGCCTTCTTGGTGGGGTCGCACGGGGACTGCTGGGCCG
TGAAGCTGGCGAACACGTCCATGACGGAGGACCAGGTGGTGGAGAACCTC
ATGGCCGGGGTCGCTGCGGTGGTGGAAAAGATCCCTCGGAAGTGGAAGAA
CGTCAAGGCCATCAACATCAAGTGCTCCAACTCGGTGGCGCTGCCGGTGT
ACAGCAATGTCGGCGACCTCCCTCCGGCACCACGCGTGGAGAAGGTGGAG
AAGGTGACGGAGGCGGGAAAGGAAGAGGAAGCCGGCGAGGGCGAGGGCAA
GGAGTCCAACTCGCAGGCCAAGAAGCGCAAGCCCCGGCCGCTCATTCGGC
AGCAGCTCAACAAACTGAAGGAGGAGGCCAAGGCAGAGAAGGCTGCAGCG
GCTGCCGAAGCGGCGACGGCGGGTAGTGGTGCGAAGGGGAACAAGGGGAA
GAAGAGGGCAGCATCAGAGAACGAAGAACCAAACGTAGGGGGAGACAGCG
GGCGAGAGGGAGCGGGTAGGAAAGTGAAGAAGATTAAGGCGATTTCCCCC
AAGGCGGCCAGCGGGAGTGCGGGCAAGAAGAGGCGAAAAACGGGCGTTGT
TGTTGGATGA
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