mRNA_E_fasciculatus_S2_contig864.16757.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE9_ECTSI) HSP 1 Score: 441 bits (1135), Expect = 7.240e-132 Identity = 220/233 (94.42%), Postives = 229/233 (98.28%), Query Frame = 3
Query: 3 DDISGGLRPMLKSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARNNFLAAE 701
DD++GGLRP L+SLVPKAQSAYIRLWKGWGLKETSAVTMVFEGS+QEAALQ+R+VSRIA+SHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVR+RVR+EHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPV VFS LEEAARDEILLAGGSLSHHHGIGKSRAGF SRVSSPVMTDLVLGMKRALDPHNVLGARNNFLAAE
Sbjct: 2269 DDVAGGLRPTLRSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSRQEAALQKREVSRIAQSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRDRVRKEHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVDVFSGLEEAARDEILLAGGSLSHHHGIGKSRAGFTSRVSSPVMTDLVLGMKRALDPHNVLGARNNFLAAE 2501
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: FAD-binding (PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ5_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.100e-64 Identity = 142/233 (60.94%), Postives = 150/233 (64.38%), Query Frame = 3
Query: 3 DDISGGLRPMLKSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARNNFLAAE 701
DD++G LR ++SLVPKAQSAYI LWKGWGLKETSAVTMVFEGS+QEAALQ+R+VSRIARSHG LSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKV V CV F ASRVSSPV+TDLVLGMKRALDPHNVLGARNNFLAAE
Sbjct: 1830 DDVAGALRSTVRSLVPKAQSAYIWLWKGWGLKETSAVTMVFEGSRQEAALQKREVSRIARSHGALSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVNVLV-------------------------AVCVCF-----------------------------------------------ASRVSSPVITDLVLGMKRALDPHNVLGARNNFLAAE 1990
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkyldihydroxyacetonephosphate (synthase n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=UPI001AD0A3E8) HSP 1 Score: 227 bits (579), Expect = 9.430e-62 Identity = 112/222 (50.45%), Postives = 149/222 (67.12%), Query Frame = 3
Query: 36 KSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARNNFLAAE 701
K++ + Q + WKG+ +++ +A T+VFEGS+QE Q+R +A+ HGGL+GG+S GK GY LTF IAY+RD+ + + ESFET V W+ LCE V+ R+ E RG+ G ++T RVTQLYP G CVYFYLA YA+G+ +P G F+E+E AARDEIL +GGSLSHHHGIGK R F RV+SP + MKRA+DP NV GA N + +
Sbjct: 378 KAIEGRLQKLVVTKWKGFDVEKMTACTLVFEGSKQEVEAQQRRTYALAKRHGGLAGGSSNGKRGYQLTFGIAYIRDWIMRHHCVAESFETSVPWSQALPLCENVKRRILEESAKRGVPGTPYITCRVTQLYPTGVCVYFYLAFYAKGLADPAGTFAEIELAARDEILRSGGSLSHHHGIGKLRQRFLPRVASPGVLAFARDMKRAVDPTNVFGAANQLFSTD 599
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Oxidase ((Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4Q3KZN6_9DELT) HSP 1 Score: 214 bits (545), Expect = 1.050e-59 Identity = 109/216 (50.46%), Postives = 140/216 (64.81%), Query Frame = 3
Query: 36 KSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARN 683
K L+ + + Y+ +G+ + +A T+VFEGS +E A+Q + V +IA HGGL GA GK GY LT+ IAY+RDF + VL ESFET V W+ + LCE+V++R+ REH RGL G F+T RVTQLY G CVYFY A YA+GV NP V+S++E AAR EIL +GGSLSHHHG+GK R F + S D K A+DP NV G N
Sbjct: 122 KRLLSRLEKLYVTGLRGFVPDKMTACTLVFEGSAEEVAVQEQQVYKIAALHGGLKAGAENGKRGYQLTYGIAYIRDFVMKHHVLAESFETSVPWSRVLELCERVKQRLYREHAARGLPGKPFITCRVTQLYQTGVCVYFYFAFYAKGVANPSQVYSDIEAAARTEILQSGGSLSHHHGVGKLRKRFLPEIMSEACLDWATRSKHAVDPDNVFGCGN 337
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2NSD2_9DELT) HSP 1 Score: 216 bits (550), Expect = 1.040e-57 Identity = 117/240 (48.75%), Postives = 156/240 (65.00%), Query Frame = 3
Query: 3 DDISGGLRPMLK-------SLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVR-NPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARNNFLAA 698
D++ L MLK L+ A+ Y+ KG+ ++ +A T+VFEGS E A Q+R +A+ +GGL+GGA+ G+ GY LTF IAY+RD+ + ++ ESFET V W+ + LCE V++R+R EH DRGL G FVT RVTQLYP GACVYFY A Y +GV +P +++E+E AARDE+L GGSLSHHHGIGK R F R++S + +KRALDP +V GA N AA
Sbjct: 356 DNLQFQLSQMLKPRKEGAAKLLSAAEKWYVTRVKGFDVERMAACTLVFEGSAAEVAAQQRRTYAVAKRYGGLAGGAANGERGYQLTFGIAYIRDWIMNHWLIAESFETSVPWSRVLELCEAVKQRIRDEHADRGLPGKPFVTCRVTQLYPTGACVYFYFAFYFKGVPGDPSALYAEIEHAARDEVLRRGGSLSHHHGIGKIRQPFVDRIASAGVRASAREVKRALDPRDVFGACNQLYAA 595
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y3G9J1_9GAMM) HSP 1 Score: 215 bits (548), Expect = 1.840e-57 Identity = 115/224 (51.34%), Postives = 146/224 (65.18%), Query Frame = 3
Query: 33 LKSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARNN-FLAAE 701
LK L + ++ KG+ E +A T+VFEGS+ E Q+RDV RIA H G++GGAS GK GY LT+ IAYLRD+ L +L ESFET +WT +C V++R+ EH+ R L G F++ RVTQ+YP G C+YFY A Y +GV NP VFSE+E AARDE+L +GGSLSHHHGIGK R F RV S + D +K+A+DP NV GA N F AE
Sbjct: 369 LKKLKSSLEKWFVLKVKGFDPNEMTACTLVFEGSKAEVRTQQRDVYRIAAKHQGMNGGASNGKRGYQLTYGIAYLRDWILNHWLLAESFETSAAWTDALAVCNNVKKRLAEEHKKRNLPGKPFMSCRVTQVYPTGVCIYFYFAFYFKGVDNPSEVFSEIEHAARDEVLKSGGSLSHHHGIGKIRQDFLPRVLSQGVLDWQQQIKKAVDPGNVFGAGNQAFETAE 592
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GVH3_9DELT) HSP 1 Score: 214 bits (546), Expect = 4.550e-57 Identity = 112/211 (53.08%), Postives = 142/211 (67.30%), Query Frame = 3
Query: 51 KAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARN 683
K + ++ KG+ +A T+V+EGS+ E Q R V+R+ R GGL+GGA G+ GY LTF+IAY+RDFA+ +LGESFET V+W+ L LC+ V+ R+ EH RGL G FVT RVTQLY G CVYFY A Y +GV V++E+E+AAR+EIL GGSLSHHHGIGK RAGF RV S + G+KR +DP NVLGA N
Sbjct: 396 KLERWFVTRAKGFEPGAMTACTLVYEGSRDEVRRQERRVARLTRRFGGLAGGAENGERGYQLTFSIAYIRDFAMQHFILGESFETSVAWSDLRELCKNVKHRLFEEHSKRGLPGRPFVTCRVTQLYETGVCVYFYFAFYFKGVAEASEVYAEIEKAAREEILANGGSLSHHHGIGKLRAGFLERVFSSTALEWRRGLKRQIDPDNVLGAGN 606
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LMV0_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.030e-56 Identity = 102/201 (50.75%), Postives = 140/201 (69.65%), Query Frame = 3
Query: 87 WGLKETSAVTM--VFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARN 683
+ LK+ SAV++ FEGS +E Q+ ++R A +GG+ G S G++GYDLTFAIAYLRDFA+ + LGESFETFV W+ L+ L + +ERV EH+ R L G+ V+ RVTQ+Y EGAC+YFY + +GV +PV + E+E+ ARDEIL GGSLSHHHG+GK R + + V+S DL + +K+ +DP N+ GARN
Sbjct: 100 YNLKKDSAVSVSITFEGSSEEVHYQKSRINRFAVKNGGVMTGPSVGQAGYDLTFAIAYLRDFAMSYFCLGESFETFVPWSKLDDLISRTKERVCLEHKKRCLPGEPLVSCRVTQIYDEGACIYFYYLMNYEGVEDPVSAYHEIEDCARDEILRQGGSLSHHHGVGKIRGKWMNTVNSDYANDLFMDIKQGIDPDNLFGARN 300
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VHC2_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.170e-55 Identity = 104/211 (49.29%), Postives = 135/211 (63.98%), Query Frame = 3
Query: 51 KAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARN 683
KA A L + + T+ FEGS +E LQ+R V + A HGGL G G++GYD+TFAIAYLRDFA+ + L ESFETFV W+ L L + R+R+EH R L G+ V+ R+TQLY EGACVYFY + Q V +P VF+E+E AAR+ IL GGSLSHHHG+GK RA F R++S + + +KR +DP N+ GARN
Sbjct: 127 KAVKALGSLTRAFDNDAAVCATVTFEGSAEEVRLQKRLVYKYAGRHGGLRAGPKVGRAGYDMTFAIAYLRDFAMTYGFLAESFETFVPWSKLSELVVATKRRIRQEHAGRALPGEPLVSSRITQLYDEGACVYFYYCMNFQNVPHPSRVFAEIEAAARETILDMGGSLSHHHGVGKLRAPFVERINSKAVETAIAEVKRGVDPSNIFGARN 337
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Match: Alkylglycerone-phosphate (synthase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D0I4K1_9DELT) HSP 1 Score: 209 bits (533), Expect = 2.490e-55 Identity = 107/217 (49.31%), Postives = 140/217 (64.52%), Query Frame = 3
Query: 33 LKSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIARSHGGLSGGASAGKSGYDLTFAIAYLRDFALLFDVLGESFETFVSWTALEGLCEKVRERVRREHRDRGLRGDAFVTHRVTQLYPEGACVYFYLAIYAQGVRNPVGVFSELEEAARDEILLAGGSLSHHHGIGKSRAGFASRVSSPVMTDLVLGMKRALDPHNVLGARN 683
L+ L + Q ++ KG+ L SA T+VFEG+ +E Q+R +AR +GGL+GGAS G+ GY LTF IAY+RD+ + +LGESFET V W+ LCE V+ R+ E R + G FVT RVTQLYP G C+YFY A Y +G+ P +++E+E AARDEIL +GGSLSHHHGIGK R F R+ SP + +K A+DP NV GA N
Sbjct: 377 LRHLESRLQRLFVTKVKGFALDRMSACTLVFEGTGREVKAQQRATYALARRYGGLAGGASNGQRGYQLTFGIAYIRDWIMNHWLLGESFETSVPWSQTLPLCESVKRRIHEECAKRNIAGTPFVTCRVTQLYPTGVCIYFYFAFYFKGLSKPAEIYAEIEHAARDEILRSGGSLSHHHGIGKIRQPFLPRIGSPGVATWAREIKAAVDPTNVFGAAN 593 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig864.16757.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig864.16757.1 >prot_E_fasciculatus_S2_contig864.16757.1 ID=prot_E_fasciculatus_S2_contig864.16757.1|Name=mRNA_E_fasciculatus_S2_contig864.16757.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=226bp MLKSLVPKAQSAYIRLWKGWGLKETSAVTMVFEGSQQEAALQRRDVSRIAback to top mRNA from alignment at E_fasciculatus_S2_contig864:21682..26251- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig864.16757.1 ID=mRNA_E_fasciculatus_S2_contig864.16757.1|Name=mRNA_E_fasciculatus_S2_contig864.16757.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4570bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig864:21682..26251- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig864:21682..26251- >mRNA_E_fasciculatus_S2_contig864.16757.1 ID=mRNA_E_fasciculatus_S2_contig864.16757.1|Name=mRNA_E_fasciculatus_S2_contig864.16757.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=678bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig864:21682..26251- (Ectocarpus fasciculatus EfasUO2)back to top |