mRNA_E_fasciculatus_S2_contig8234.16381.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: VOC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 746 bits (1926), Expect = 1.020e-267 Identity = 385/413 (93.22%), Postives = 394/413 (95.40%), Query Frame = 2
Query: 74 MKARSSTCRCVRWAQLLVLGTCGDVRVWQAAGFGLGARPPVPVQQKQHTASCPATLVLMSDSDASDRSXXXXSRRGEGGAKPTGRGDFLRNSAAFLAGGSAAIAATTTAGAGFPSAAEAIGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAA-DGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAILAEDVEKIAESLGGAVGVDSARGEGRSVAVADPDGYSVRFVEYSDWRGQLPRLV 1309
MK RSSTCRCVRWAQLLVL TCGD+RVWQAAGFGLGARP VPVQQKQHTA+C AT VLMS+S ASDRS SRRGEGGA+PTGRGDFLRNSAAFLAGGSAAIAA TTAGAGFPSAAEAIGDLYEFKDQARFAQHAT+QVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEA AA DGEED DFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSG+RRDPPMFLAVKVKDMKRSVQWYTDVAGMTK PFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVA+LAEDVEKIAESLGG V VDSARG G+SVAVADPDGY V+FVEYSDWRGQLPRLV
Sbjct: 1 MKTRSSTCRCVRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSS---SRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRLV 410
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: VOC (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.440e-78 Identity = 159/305 (52.13%), Postives = 201/305 (65.90%), Query Frame = 2
Query: 404 AGFPSAAEAIGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNT--TVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAREA-GSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQ--INPGSVVS-VAILAEDVEKIAESLGGAVGVDSARGEGRSVAV-ADPDGYSVRFVEYSDWRGQL 1297
AG P AIG+L E Q RF QHA + VPD+ AA++FY +G+GM+V+R+RA NT T V +GPE L VP + GVSS YGGHF+LEL ADGE FYDPGNGVQ++QIAVD+YRIS+V+ AGG + GYG GL++ L SG RRDP MF+A+KV D+K+SVQWYTDV GM++ P+P+AREA S FEP+QP GSVFM Y+ + GV+LIP K D+ I GS S +A+LA DVE + +G A+ A G SVAV ADPDGY+ VEY D+ +L
Sbjct: 87 AGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLN--PPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVG-AMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Uncharacterized (protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.300e-55 Identity = 133/311 (42.77%), Postives = 183/311 (58.84%), Query Frame = 2
Query: 413 PSAAEAIGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQ---INPGSVVS-VAILAEDVEKIAESLGGAV-----GVD-----SARGEGRSVAVA-DP-DGYSVRFVEYSDWRGQL 1297
P+AA AIG+L E+ RF QH + VPDMAAAL FY+DG+ M+V+R+R N+T VG+GPE L+ P + GVSS + YG HF LELN + EE DPGN +LQ+AV S R+S++ +AGG I+S YG++ V +PGGLR +++ G RRDP M LA+ V D++++ +Y + GM + P+P +R S +EP+QP GS F+A+ + FG++L+P K + + G VV +AIL DV GGA GVD A G G VAV DP G V VE D +L
Sbjct: 55 PNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKT------EEGDTPVLDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVV----GKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKEL 355
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.720e-54 Identity = 115/268 (42.91%), Postives = 156/268 (58.21%), Query Frame = 2
Query: 371 SAAIAATTTAGAGFPSAAEAIGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVS-VAILAEDVEKI 1171
S+AI + G +IG+L EF D A+F QH ++V DM AAL+F + G+ M V+RTR N T VG+GPE L P FV GVSS YGGHF+LEL S E+ F +PG +Q++Q+A + +++KAGGII GYGY V+AP GL ++ RDP ++A+KVKDMK+S+ +Y V GM KL + R S FEP QP GSV M Y + ++LIPA + D I G+V + +AI+ VE I
Sbjct: 12 SSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL-----EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDI 274
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: VOC (domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 195 bits (496), Expect = 8.990e-54 Identity = 128/304 (42.11%), Postives = 172/304 (56.58%), Query Frame = 2
Query: 431 IGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLF--NTTVVGFGPEALE---VPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFF---YDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAR-EAGSPFEPEQPAGSVFMAYEGEAFGVVLIPA----AKGDQINPGSVVS-VAILAEDVEKIAESLGGAVGVDSARGEGRSVAV-ADPDGYSVRFVEYSDWRGQL 1297
+G L E ++ R+ QHA + VP M AL FY G+GM+VIRTR P N T VG+GPE L+ V F G+SS N YG HFTLEL ++ +EDA Y+PGNGVQFLQIA+ R+SQ+ + GG I YG+++V APGGL L+++ G RRDP MF VKD+ + +Y GM +LP+ +AR SP EP+QP S +M Y + FG++L+ AK I GSV +AIL+ +V + SL G G +VA D GY + VEY D+ +L
Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGF-TGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Putative (glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 117 bits (293), Expect = 1.290e-24 Identity = 92/288 (31.94%), Postives = 137/288 (47.57%), Query Frame = 2
Query: 467 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAV-DSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAREAGSPFEPEQPAGSVFMAYEG--EAFGVVLIPAAKGDQINPGSVVSVAILAEDVEKIAESLGGAVGVDSARGE-----GRSVAVADP-DGYSVRFVEYSDWRGQLPR 1303
F QHA L+V D+ ++KF+ G+GMKV RTR N V FGPE L T GG F LEL N QF Q A+ +S R+++V +GG I G+GY ++ AP G ++ + RRDP + V V D+ + ++Y V GM +E G FEP + GSV M Y E G++L+P + + + + +A+L +DV + E L A GE G V++A P +G + FV+Y+D+ + P+
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRG----NQAFVSFGPETL------------TAADGGKFALELVENPSTTQ--------------DNSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQPK 410
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPX6_9EUKA) HSP 1 Score: 102 bits (255), Expect = 4.530e-20 Identity = 73/236 (30.93%), Postives = 117/236 (49.58%), Query Frame = 2
Query: 467 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAR------------EAGSPFEPEQPAGSVFMAYEGEAF--GVVLIPAAKGDQINPGS 1129
F Q + VPDM A+ F+ G G V+ T+ N T +GFGP+++ G F LE+ E ++ G +Q++Q+A+ +R+SQV+K GG I+S YG+ Q+ APGGL L++ + +RRDP F+A++ +K SV Y + G+ K+ R E +EP++ GS+ M+Y + GV+L+P KG ++ GS
Sbjct: 105 FYQSMRIGVPDMDKAVTFWTKGCGALVLDTKLVNGVNVTRIGFGPQSIRRDD------------GAKFALEMV------------EGPSTSFETGGVLQYVQLAIPIFRLSQVMKNGGDIQSAYGWTQLTAPGGLPLRVHIDESRRDPFEFVALRTSSLKSSVAHYESL-GLRKVDEKSGRKVELSINKNTIFENSDAYEPDREVGSILMSYGDKKAETGVLLLPPLKGAKLITGS 315
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H0Q2_9EUKA) HSP 1 Score: 100 bits (250), Expect = 1.810e-19 Identity = 72/239 (30.13%), Postives = 117/239 (48.95%), Query Frame = 2
Query: 467 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAR-------------EAGSPFEPEQPAGSVFMAYEGEAF--GVVLIPAAKGDQ-INPGSV 1132
F + + VP++ A++F+ G G ++ +R N T +GFGP++ G F LEL E A F+ + +Q++Q+A+ +R+SQVV GG I S YG+ +V+APGGL L++ + RRDP F+A++ +++ + + Y +V GM L + E EPE+ AGSV M + GV+L+P KG + ++PG V
Sbjct: 105 FCRGLRIGVPNLDEAVRFWTSGCGALLLDSRMIDGHNVTTIGFGPQSPRAED------------GAKFALELV------------EGAPTFFGDDSPLQYIQLAMPIFRLSQVVAYGGKILSAYGWTEVIAPGGLPLRVRIEETRRDPFEFIALRTSNLRAATKHYEEVLGMNTLSETSRKKFKLESINQNTIFENSDALEPEREAGSVLMTFGAAELTTGVLLLPPTKGRKALDPGFV 319
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Uncharacterized (protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 100 bits (249), Expect = 4.530e-19 Identity = 65/185 (35.14%), Postives = 103/185 (55.68%), Query Frame = 2
Query: 485 LQVPDMAAALKFYVDGVGMKVIRT-RAGPL-FNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAA----ADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAREAGSP 1021
++VPD+AAA +F++DG+ M +R+ R GP VVG+G E L+ GG F+LEL A A A DA+ + ++Q+ V + RIS +V++GG IES YGY++V +PGGL +++++ RRDP F+A++V D++ + +Y GM ++P P R P
Sbjct: 131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDD------------GGKFSLELVQASARAPAPARLALDAPDAE----AAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IK92_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 9.840e-17 Identity = 69/226 (30.53%), Postives = 112/226 (49.56%), Query Frame = 2
Query: 455 DQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAAAADGEEDADFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGARRDPPMFLAVKVKDMKRSVQWYTDVAGMTKLPFPRAR---------EAGSPFEPEQPAGSVFMAY-EGEAF-GVVLIP 1096
+++ F Q + V D+ AL F+ +G+G V TR N TVVGFGPE+L G F++EL S G+ +Q++Q+A+ +R+SQ + GG I+S YG+ ++APGG L++ + RRDP F A++V ++K +V+ + PF + + E FEP++ G+ M+Y + EA GV+L+P
Sbjct: 129 ERSHFLQRLAVPVDDIEGALNFWRNGLGALVRSTRIVDGRNVTVVGFGPESLRAVD------------GAKFSVELVSAPTSVE--------------GSQLQYIQLAMPVFRLSQAMAYGGDIKSAYGWTDLVAPGGTPLRVRIDETRRDPFEFAALRVSNLKAAVRHFEAFGMSAGEPFGKRKLSLLGNTAFEDRDAFEPDRELGATLMSYGDPEASTGVLLLP 328 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8234.16381.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8234.16381.1 >prot_E_fasciculatus_S2_contig8234.16381.1 ID=prot_E_fasciculatus_S2_contig8234.16381.1|Name=mRNA_E_fasciculatus_S2_contig8234.16381.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=413bp MKARSSTCRCVRWAQLLVLGTCGDVRVWQAAGFGLGARPPVPVQQKQHTAback to top mRNA from alignment at E_fasciculatus_S2_contig8234:1973..5152- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8234.16381.1 ID=mRNA_E_fasciculatus_S2_contig8234.16381.1|Name=mRNA_E_fasciculatus_S2_contig8234.16381.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3180bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8234:1973..5152- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8234:1973..5152- >mRNA_E_fasciculatus_S2_contig8234.16381.1 ID=mRNA_E_fasciculatus_S2_contig8234.16381.1|Name=mRNA_E_fasciculatus_S2_contig8234.16381.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1239bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8234:1973..5152- (Ectocarpus fasciculatus EfasUO2)back to top |