mRNA_E_fasciculatus_S2_contig8138.16290.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: PX (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ85_ECTSI) HSP 1 Score: 439 bits (1130), Expect = 4.460e-153 Identity = 219/231 (94.81%), Postives = 226/231 (97.84%), Query Frame = 1
Query: 1 KVSFRGSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSMVNFLEVAKNVQMEEPDDDVNSDYDDLVAEYEERETQRLEDLVQTFQDRMIDSQSVRVEPRNDAEVEARRQKLLQACNGFREHDDHLKKFLNPSPNPQVQNVDQTIDTVNFVHDQNFENSVVGASIELSSKLQTSALTQTQYHGGHGLVTSMGNI 693
+VSFRGSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSM++FLEV KNVQ+E PDDD NSDYDDLVAEYEERETQRLEDLVQTFQDRMIDSQS+RVEPRND EVEARRQKLLQACNGFREHDDHLKKFLNPSPNPQVQNVDQ IDTVNFVHDQNFEN+VVGASI+LSSKLQTSALTQTQYHGGHGLVTSMGNI
Sbjct: 25 EVSFRGSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSMLSFLEVGKNVQIEAPDDDPNSDYDDLVAEYEERETQRLEDLVQTFQDRMIDSQSIRVEPRNDVEVEARRQKLLQACNGFREHDDHLKKFLNPSPNPQVQNVDQAIDTVNFVHDQNFENNVVGASIDLSSKLQTSALTQTQYHGGHGLVTSMGNI 255
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: Phox (homologous domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P2_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.030e-32 Identity = 77/170 (45.29%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 1 KVSFRGSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSMVNFLEVAKNVQMEEPDDDVN-SDYDDLVAEYEERETQRLEDLVQTFQDRMIDSQSVRVEPRNDAEVEARRQKLLQACNGFREHDDHLKKFLNP 507
+V FRG+ W +++RFNDF LHQ L R F + LP +RFF RFDP FLNERS L FL L + V S ++V+FLEV NV E P ++D E E+E RL LV+ +ID VEP ++EV ARR+KLL+AC+GFR H HL+ F P
Sbjct: 24 EVGFRGAMWHLQRRFNDFAALHQDLRRHFPAAHIPDLPPKRFFGRFDPQFLNERSAHLHQFLQEVLATVPVVESQALVDFLEVPGNVAWERPMGAGGVGEFDRSGKEAVEQE--RLVALVEETAKALIDVSRTGVEPLEESEVMARREKLLRACDGFRAHAAHLRGFFKP 191
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVR5_HETAK) HSP 1 Score: 80.9 bits (198), Expect = 5.450e-14 Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 1
Query: 1 KVSFRGSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSMVNFLEVAKNVQMEEPDDDVNSDYDDLVAEYEERETQRLEDLVQTFQDRMIDSQSVRVEPRNDAEVEARRQKLLQACNGFREHDDHLKKFLNPS---PNPQVQNVDQTIDTV 555
+V+F W++ +RFNDFV L + L E R P PK+RFF RFDP+FL ERS LQ F+ + V S+ + FLE + +V + + E E RL LV+ ++ + E + +++ A+R+ L +A +G + HL++ + P+ P+ +VQ D +D +
Sbjct: 23 EVTFAQLQWLVFRRFNDFVELWETLRDEGRQPRQEP-PKKRFFGRFDPNFLKERSDQLQDFIDSVARETSVVESEGLRGFLEFSNHVDWDPSGPGAMGGGGSEIRALAEAE--RLAVLVEATARALVPVGRMTGEEIDSSQMVAQRKALFKATDGLKAQQAHLQQSMLPTFPVPSTRVQGQDAALDAL 207
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: PX (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8M7_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.080e-7 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
Query: 4 VSFRGSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGR--ALVKIQVTNSDSMVNFLEVAKNVQMEEPDDDVNSDYDDLVAEYEERETQRLEDLVQTFQDRMIDSQS----VRVEPRNDAEVEARRQKLLQACNGFR 471
V+ +W I +RFNDF LH+ L R F G LP +++F RF+P+FL ER +LQ +L +L + + V F EV +++ ++ +D V+ D L + + E R+ ++ I++ S V +E + E+ +R KLLQ +G R
Sbjct: 22 VTHGDQSWSILRRFNDFSHLHEALCRSFPHFP-GRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFPERSQEGCV-FFEVDRHLAGQDAEDKVHLDASALGSPAQVEEA-RISSILWEASHAFINTSSPLHQVSIEQMDPEELAQQRSKLLQRTSGLR 180
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEF3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.510e-7 Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 16 GSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSMVNFL 243
G+++ + +RFN F LH+ LS+EF + PLP++ NRF+ +F+ R ++L+ FL R + +++ S V FL
Sbjct: 38 GTSFSVIRRFNHFKVLHKELSKEFPGAIIPPLPEKSLLNRFEEEFVETRRRNLERFLERVALHLELRTSAHFVKFL 113
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: Hypothetical (protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCE3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.530e-6 Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 16 GSNWVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFLGRALVKIQVTNSDSMVNFL 243
G+++ + +RFN F LH+ LS+EF + PLP++ NRF+ +F+ R ++L+ FL R + +++ S V FL
Sbjct: 38 GTSFSVIRRFNHFKVLHKELSKEFPGAIIPPLPEKSLLNRFEEEFVETRRRNLERFLERVALHLELRTSAHFVKFL 113
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: PX (domain-containing protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RI99_TRIAD) HSP 1 Score: 55.5 bits (132), Expect = 8.370e-5 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 13 RGSN----WVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFL 186
RGSN W +++R+NDFVTLH L RD PLP ++ F D DF+ +R Q LQ ++
Sbjct: 38 RGSNPENFWKVQRRYNDFVTLHAALQISGRDL---PLPPKKLFGNLDKDFVAKRKQQLQVYV 96
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Match: PX (domain-containing protein kinase-like protein n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SL54_9METZ) HSP 1 Score: 55.5 bits (132), Expect = 9.240e-5 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 13 RGSN----WVIEKRFNDFVTLHQGLSREFRDTDLGPLPKRRFFNRFDPDFLNERSQDLQAFL 186
RGSN W +++R+NDFVTLH L RD PLP ++ F D DF+ +R Q LQ ++
Sbjct: 38 RGSNPENFWKVQRRYNDFVTLHAALQISGRDL---PLPPKKLFGNLDKDFVAKRKQQLQVYV 96 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8138.16290.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8138.16290.1 >prot_E_fasciculatus_S2_contig8138.16290.1 ID=prot_E_fasciculatus_S2_contig8138.16290.1|Name=mRNA_E_fasciculatus_S2_contig8138.16290.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=156bp MVNFLEVAKNVQMEEPDDDVNSDYDDLVAEYEERETQRLEDLVQTFQDRMback to top mRNA from alignment at E_fasciculatus_S2_contig8138:902..6801+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8138.16290.1 ID=mRNA_E_fasciculatus_S2_contig8138.16290.1|Name=mRNA_E_fasciculatus_S2_contig8138.16290.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5900bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8138:902..6801+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8138:902..6801+ >mRNA_E_fasciculatus_S2_contig8138.16290.1 ID=mRNA_E_fasciculatus_S2_contig8138.16290.1|Name=mRNA_E_fasciculatus_S2_contig8138.16290.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=468bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8138:902..6801+ (Ectocarpus fasciculatus EfasUO2)back to top |