mRNA_E_fasciculatus_S2_contig8056.16217.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH30_ECTSI) HSP 1 Score: 147 bits (371), Expect = 2.930e-39 Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 1
Query: 13 GGASGYDAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQAG 264
G SG DAADD +PLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQAG
Sbjct: 243 GEVSGQDAADD--VPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQAG 324
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX0_9PHAE) HSP 1 Score: 126 bits (317), Expect = 5.830e-32 Identity = 71/85 (83.53%), Postives = 74/85 (87.06%), Query Frame = 1
Query: 10 GGGASGYDAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQAG 264
GG SG DAADD +PLPPWVTSSEVMSPLLAAYDARIQDLE Q AAQRDG+EELAGRT QLVEENDT + HTRELDELVQQAG
Sbjct: 116 GGEVSGPDAADD--VPLPPWVTSSEVMSPLLAAYDARIQDLERQNAAQRDGIEELAGRTRQLVEENDTAK--HTRELDELVQQAG 196
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA8_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 4.880e-13 Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 43 DAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELV---QQAG 264
DA +P WV S+EVMSPLLAAYD RIQDLEG V +QR + L RT LV EN+ LR+ ++LD LV QQ G
Sbjct: 110 DAQPDVPGWVASAEVMSPLLAAYDGRIQDLEGLVESQRGELAALTERTEALVAENERLREGQVQDLDALVRVVQQTG 186
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DA37_SAPPC) HSP 1 Score: 62.8 bits (151), Expect = 1.610e-9 Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 37 ADD---APLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQA 261
ADD APLP PPW TS E MSPL AAY++RI++LE V + ++ G L EN+ L+ E + +D+LV Q+
Sbjct: 102 ADDDGSAPLPSPPWFTSKEYMSPLFAAYESRIKELEATVDKHKRDLDAFVGHADALARENERLQHELSVTMDKLVLQS 179
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAU4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.000e-9 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 52 LPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQA 261
L PPW TS E MSPL AAY++RI++LEG R ++ A + H + +ND L+QE T L++L+ Q+
Sbjct: 101 LVSPPWFTSKEYMSPLFAAYESRIKELEGVCEKYRTDIDSFASQVHTMAADNDRLQQELTSALEKLILQS 170
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLB8_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.730e-7 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 31 DAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQA 261
D +D+ P PPW TS E MSPL AAY+ RI++LE R ++ L END L QE T L++L+ A
Sbjct: 94 DDGEDSMTP-PPWFTSKEYMSPLFAAYEGRIKELESTCDKHRKDLDAFVAHATSLTSENDRLNQELTTALEKLIMHA 169
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FKT6_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.740e-7 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 31 DAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQA 261
D +D+ P PPW TS E MSPL AAY+ RI++LE R ++ L END L QE T L++L+ A
Sbjct: 94 DDGEDSMTP-PPWFTSKEYMSPLFAAYEGRIKELESTCDKHRKDLDAFVAHATSLTSENDRLNQELTTALEKLIMHA 169
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Aste57867_12932 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYX0_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.380e-7 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 31 DAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELV 252
D D L PPW +S E MSPL AAY++RI++LE R M+ + L END L++E T L++L+
Sbjct: 99 DDDGDGSLASPPWFSSKEYMSPLFAAYESRIKELETTCEKTRKDMDSFVAQASHLATENDRLQEELTTALEKLI 172
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9C6_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 8.300e-7 Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 31 DAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQA 261
D +D+ + PPW TS E MSPL AAY+ RI++L+ R ++ L +ND L+QE T L++L+ Q+
Sbjct: 93 DEGEDSSMVPPPWFTSKEYMSPLFAAYEGRIKELDIMCEKHRKDLDAFVVHAQSLALDNDRLQQELTSALEKLILQS 169
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Match: Uncharacterized (protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B9M0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.010e-6 Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 31 DAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQA 261
D +D+ P PPW TS E MSPL AAY+ RI++LE R ++ L +ND L QE T L++L+ A
Sbjct: 94 DDGEDSMTP-PPWFTSKEYMSPLFAAYEGRIKELESTCDKHRKDLDAFVVHATSLTSDNDRLNQELTTALEKLIMHA 169 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8056.16217.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8056.16217.1 >prot_E_fasciculatus_S2_contig8056.16217.1 ID=prot_E_fasciculatus_S2_contig8056.16217.1|Name=mRNA_E_fasciculatus_S2_contig8056.16217.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=88bp GEGGGGASGYDAADDAPLPLPPWVTSSEVMSPLLAAYDARIQDLEGQVAAback to top mRNA from alignment at E_fasciculatus_S2_contig8056:5030..6033- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8056.16217.1 ID=mRNA_E_fasciculatus_S2_contig8056.16217.1|Name=mRNA_E_fasciculatus_S2_contig8056.16217.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1004bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8056:5030..6033- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8056:5030..6033- >mRNA_E_fasciculatus_S2_contig8056.16217.1 ID=mRNA_E_fasciculatus_S2_contig8056.16217.1|Name=mRNA_E_fasciculatus_S2_contig8056.16217.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=264bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8056:5030..6033- (Ectocarpus fasciculatus EfasUO2)back to top |