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Homology
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: Helicase (C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI) HSP 1 Score: 893 bits (2307), Expect = 0.000e+0 Identity = 489/560 (87.32%), Postives = 502/560 (89.64%), Query Frame = 1
Query: 433 MYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTRPWLPPTPQ---ANQPDMGADSTASRRRSDIAGSPKPRMHVIDLVDNCGKHKASTCNSYTRAQRLMSTALGLSSGFCGDDASTDGMGGAFSVEHVGSLAAEAMSLVDADGAAEVGDACSHPLLEAKTPRELALLVKHYRLLQGAKTAETMLTVAGKGIGDGIPPPGWDLSQLSVGDRIGKDSFLRVVVEAILLGYEEGQDDDESEGFDDXXXXXXXXXXXXXXXXXXXGYESSFRKPHQRAKRRHFPRAHIRNRPSLRRRKKKNFAAGTATVHMRHASSGTIFSWRTSGVKDTSGAELHEGASYRLVATIAEALAAGGAEGAGEIGVTRCRLTLVTADASSGRR 2103
MYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIG LDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFS GALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKK+SPRGIAFCADVRHAHDLARVLNEHNISAMA+DGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAP+CDTIVMCRPTQSAPLYMQM+GRGTRPWL PTPQ AN D GADSTASRRRSDIA SPKPRMHVIDLVDNCGKHK + MS ALGLSSGF GDDA TDGMGGAFSVEHVGSLAAEAMSLVDADGAAEV +ACSHPLLEAKTPRELALLVKHYRLLQGAKTAET LTV G+G DG PGWDLSQL VGDRIGKDSFLRV+VEAILLGYEEGQDDDESE F XXXXXXXXXXXXXXXX G E SF KPH + KRR FPRA IR RP RKKK FAAG+ATV MRH SSGTIFSWRTSGVKDTSGAELHEGASYRLVAT+ EALAAGGAE AGE+G+TRCRLTLVTADAS GRR
Sbjct: 1 MYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKKSPRGIAFCADVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPYCDTIVMCRPTQSAPLYMQMIGRGTRPWLSPTPQVRPANNADAGADSTASRRRSDIAASPKPRMHVIDLVDNCGKHKVMS----------MSAALGLSSGFRGDDAGTDGMGGAFSVEHVGSLAAEAMSLVDADGAAEVENACSHPLLEAKTPRELALLVKHYRLLQGAKTAETTLTVTGRGANDGTSSPGWDLSQLCVGDRIGKDSFLRVIVEAILLGYEEGQDDDESEDFXXXXXXXXXXXXXXXXXXDEDGCERSFSKPHPKTKRRRFPRAPIRTRPW---RKKKPFAAGSATVRMRHPSSGTIFSWRTSGVKDTSGAELHEGASYRLVATVTEALAAGGAEEAGEVGLTRCRLTLVTADASGGRR 547
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE) HSP 1 Score: 694 bits (1790), Expect = 9.140e-241 Identity = 354/385 (91.95%), Postives = 363/385 (94.29%), Query Frame = 1
Query: 10 ATGSISVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTRPWLPPTPQANQPDMGADSTASRRRSDI 1164
A GS SVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQ AFPEL RRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKG ETAHAGLDVVVASVQTLGRRGSGAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIG LDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFS GALSTAVNNDVRNEAAARAMLEFGAGEP SS KK+SPRGIAFC DVRHAHDLARVLNEHNISAMA+DGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAP CDTIVMCRPTQSAPLYMQM+GRGTRPWLPPTPQ + D ++ +++I
Sbjct: 10 AAGSTSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQ-AFPELCRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGNETAHAGLDVVVASVQTLGRRGSGAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPLSSRKKKSPRGIAFCVDVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPSCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAETPRITDISSYSAQNNI 393
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W6_9PHAE) HSP 1 Score: 340 bits (871), Expect = 4.460e-106 Identity = 201/242 (83.06%), Postives = 208/242 (85.95%), Query Frame = 1
Query: 1378 MSLVDADGAAEVGDACSHPLLEAKTPRELALLVKHYRLLQGAKTAETMLTVAGKGIGDGIPPPGWDLSQLSVGDRIGKDSFLRVVVEAILLGYEEGQDDDESEGFDDXXXXXXXXXXXXXXXXXXXGYESSFRKPHQRAKRRHFPRAHIRNRPSLRRRKKKNFAAGTATVHMRHASSGTIFSWRTSGVKDTSGAELHEGASYRLVATIAEALAAGGAEGAGEIGVTRCRLTLVTADASSGRR 2103
MSLVDADGAAEV +AC HPLLEAKTPRELALLVKHYRLLQGAK AET LTV G+G DGI PPGWDLSQL VGDRIGKDSFLRVVVEAILLGYEEGQDDDESE XXXXXXXXXXXXXX GYE SF KPHQR KRR FPRAHIR+RPS R KKK FAAG+ATV MRH SSGTIFSW+TSGVKDTSGAELHEGASYRLVAT+AEALA GG +G GEIGVTRCRLTLVTA AS RR
Sbjct: 1 MSLVDADGAAEVENACLHPLLEAKTPRELALLVKHYRLLQGAKAAETTLTVTGRGANDGISPPGWDLSQLYVGDRIGKDSFLRVVVEAILLGYEEGQDDDESEDLXXXXXXXXXXXXXXXXYDDGDGYERSFSKPHQRTKRRRFPRAHIRSRPSPRWSKKKPFAAGSATVRMRHPSSGTIFSWKTSGVKDTSGAELHEGASYRLVATVAEALAVGGTKGPGEIGVTRCRLTLVTAAASGNRR 242
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM4_9STRA) HSP 1 Score: 325 bits (832), Expect = 1.130e-94 Identity = 213/495 (43.03%), Postives = 269/495 (54.34%), Query Frame = 1
Query: 28 VLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLG-RRGSGA-ARLRKFANYG-GVVVVDEAHHVKAGGMYDDVLNG-----------------LGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQ-------------------------------DFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRG----------------------------IAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTE--------GFDAPFCDTIVMCRPTQSAPLYMQMLGRGTRPWLPPTPQANQPDMGADS--TASRRRSDIAGSPKPRMHVIDLVDNCGKHKASTCNS 1245
+LRPYQ V+ + LY QGT R+LVP+ATG+GKT VF+H+P AFPEL++RGTLVLVHR+ELV+QA A + L VG+E E + A D VVASVQTLG RRG+G ARLR+ G+V+VDEAHH+ G+Y+ +LNG LG+GS C G+TRGG L+AGFTATP RADG +L PFFD LDL WGI G+LV+I + T +A L R Q DF + LS AVN RNEA RA+ P S+G G + FCA V HAHDLARVL++ + A A+DG ++R + FR+G+++ +TN GV TE GFDAP +T+VM RPT S PL+MQM+GRGTRP P A+ +A RRS I S KP M ++D+VDNCGKHK T S
Sbjct: 19 MLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPS-AFPELAKRGTLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNI----IVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRP----APGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGS 502
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: ResIII (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE3_ECTSI) HSP 1 Score: 234 bits (597), Expect = 5.690e-68 Identity = 127/158 (80.38%), Postives = 131/158 (82.91%), Query Frame = 1
Query: 1 PAGATGSISVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQ---------------------QAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLRKFANYGGVVVVDEA 411
P+ A GS SVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQ QAFPEL RRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARL+ FA+Y GVVVVDE+
Sbjct: 4 PSAAAGSTSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQIKTRDEYANGEGRGRFRCLRQQAFPELCRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLQNFADYAGVVVVDES 161
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: DEAD/DEAH (box helicase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1F660_9DELT) HSP 1 Score: 220 bits (560), Expect = 6.340e-58 Identity = 150/403 (37.22%), Postives = 205/403 (50.87%), Query Frame = 1
Query: 19 SISVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLRKFANYG-GVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTRPWLPPTPQANQPDMGADSTASRRRSDIAGSPKPRMHVIDLVDNCGKH 1224
++ +LR YQ + + + + +G R LV L TG GKTV F HLP F L + LVL HR+EL++QA P V +E+ A D+VVASV TLGR +G++RL +F ++V+DEAHH A Y +L V + + LL G+TATPRR D + L F + DL I GYLV + A+ V + D++ + TR DF LS VN RN+ +A LE K + I F DVRHA+DLA V + + + + G M K++R L AFRSG + +TNC +LTEGFD P +TI+M RPT+S+ LY QM+GRGTR K R+ VID+VDN +H
Sbjct: 13 AMHLLRGYQLACLKAIQQAHSRGVTRQLVSLPTGTGKTVCFAHLP--GFLGLPGK-MLVLAHREELLEQAAGKLEAVNPDRRVEIEQADRHASEEADIVVASVATLGRS-NGSSRLGRFDPQAFRLIVIDEAHHAVAP-TYRAILEYFDVFAPPSPRSP---LLVGYTATPRRGDEVGLESIFQEIVYHRDLREMIEAGYLVALRAYKVTSEVDLSPVHTRHGDFVVNELSDRVNTIDRNDLIVKAYLE----------KAYGSKTIVFTVDVRHAYDLALVFQRYGVPCLPVCGEMPKEERRDVLEAFRSGRIQVITNCNLLTEGFDDPEVETIIMARPTKSSLLYTQMIGRGTR---------------------------TAPGKERLTVIDVVDNASRH 370
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: DEAD/DEAH (box helicase n=1 Tax=uncultured Desulfobacterium sp. TaxID=201089 RepID=A0A445N132_9DELT) HSP 1 Score: 218 bits (556), Expect = 1.350e-57 Identity = 147/355 (41.41%), Postives = 191/355 (53.80%), Query Frame = 1
Query: 31 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGS----GAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTR 1083
LR YQ + E Y G RR LV L TG GKTV+F P+ ++ LVL HR EL+ QA + P+L+V VE+ TA DVVVASV TLGR+GS G R F ++VVDEAHH A + VL L V ETR +LL GFTATP+R DG+ L F + S L I G+L + A+ V T D++ + TRM DF T LS AVN + RN+ + G+ + + FC DV HA LA+ N +SA A+ G M++ +R + L FR G+ S L NC VLTEG+D P + I++ RPT+S LY QM+GRGTR
Sbjct: 12 LRDYQRECLSAIFERYQAGIRRQLVCLPTGSGKTVIFAEFPRYF---KMKKQMLVLAHRAELLDQACEKIRRANPYLTVAVEQADRTADPECDVVVASVPTLGRKGSRRLTGLDPDRFF-----LIVVDEAHHATAD-TFKRVLKYLDVFMP---ETR--KLLVGFTATPKRGDGVGLDAVFQEIVYSRSLPEMIKAGHLSPVAAYRVETDIDLSRVKTRMGDFVTSQLSRAVNIEERNDLIVKVFHTHLEGKQT----------LCFCVDVAHALSLAQAFNREGVSAAAVTGHMDRAEREKELEKFRVGKTSVLANCMVLTEGYDEPSVEGIILARPTKSTLLYTQMIGRGTR 342
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Acidobacteria bacterium 13_1_40CM_56_16 TaxID=1803458 RepID=A0A1Q7G082_9BACT) HSP 1 Score: 210 bits (534), Expect = 2.700e-56 Identity = 138/354 (38.98%), Postives = 187/354 (52.82%), Query Frame = 1
Query: 28 VLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLR--KFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTR 1083
+LRPYQS ++ + Y RR++V L TG GKTVVF H P+ ++ +R LVL HR+EL+ QA F P L +E+ A A VV+ASV TL R G+ ARL +F+ +VVVDEAHH A Y + + G+ E R L GFTATPRR D L F+ + D+ IA YL I + + T + + R DF L+ VN +RN +A +F AG R I FC DV HA D+ R +E I A + G +++ +R LA F +G++ +TNC +LTEGFD P D ++M RPT+S LY QM+GRGTR
Sbjct: 15 LLRPYQSEALNAVRDAYKADKRRVIVSLPTGTGKTVVFAHFPRVL--KMKKR-LLVLAHREELLLQAQDKFRSIDPELKAEIEQAGARAAADAKVVIASVPTLARNGARLARLHPDEFS----IVVVDEAHHAVAP-SYRRIFDHFGLF-----EPGVSRYLIGFTATPRRGDKQGLGEVFEEVCYARDMREMIACRYLCPITGWRIDTDLSLDNVKVRHGDFVESQLARVVNTPLRNTLLVKAYRDFAAGR----------RAIIFCVDVAHAQDVHRAFDEAGIRAAPVWGELSRDERRNVLAEFSAGKIDVVTNCNLLTEGFDEPRVDCVIMARPTRSKLLYAQMIGRGTR 345
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: DNA (helicase, phage associated Type III restriction enzme n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XIT3_9DELT) HSP 1 Score: 214 bits (545), Expect = 4.140e-56 Identity = 145/352 (41.19%), Postives = 181/352 (51.42%), Query Frame = 1
Query: 31 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLRKF-ANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTR 1083
LR YQ ++ + Y G RR L L TG GKTV+F P+ R LVL HR EL++QA P L + VE+ A DVVVASV TLGRRGS RL++ N ++VVDEAHH A Y VL GV A +T +LL GFTATP+R DG L F + S L I YL + A+ V T D++ + TRM DF T LS AVN RN+ K R + FC DV H LA N +I A A+ G M++ R +AL F +G + L NC VLTEG+D P I++ RPT+SA LY QM+GRGTR
Sbjct: 13 LRDYQRECLEAIMTRYRAGVRRQLTCLPTGSGKTVIFAEFPRYF---RMRNQMLVLAHRSELLEQACDKIRCTNPDLKIAVEQAGRIADPACDVVVASVPTLGRRGS--KRLQRLDPNRFFLIVVDEAHHATAA-TYKRVLEYFGVFEA---DTA--KLLVGFTATPKRGDGQGLDAVFQEIVFSRSLPEMIHAKYLAPVAAYRVETDIDLSRVKTRMGDFVTSHLSRAVNIAPRNDLVVNVFRS----------KLEDRRTLCFCVDVAHTRSLAEAFNRMDIPAAAVSGDMDRAARAKALEDFHTGRIRVLANCMVLTEGYDEPSVSGIILARPTKSALLYTQMVGRGTR 343
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Match: Uncharacterized (protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8ZVD1_9BACT) HSP 1 Score: 213 bits (543), Expect = 1.520e-55 Identity = 142/353 (40.23%), Postives = 187/353 (52.97%), Query Frame = 1
Query: 31 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQQAFPELSRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLR--KFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGSLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNISAMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMLGRGTR 1083
LR YQS ++ + Y G RR++V L TG GKTVVF H P+ ++ +R LVL HR+EL+ QA F P L V +E+ A VV+ASV TL R G+ +RL+ +F+ +VVVDEAHH A Y + + G+ E R L GFTATPRR D L F + D+ IA+ YL I + V + + + R DF L+ AVN +RN +A +F G R I FC DV HA D+ RV E I A + G +++ R LAAF +GE+ +TNC VLTEGFD P D ++M RPT+S LY QMLGRGTR
Sbjct: 12 LRAYQSEALNAVCDAYRSGKRRVIVSLPTGTGKTVVFAHFPRVL--KMKKR-LLVLAHREELLLQARDKFRSIDPELKVEIEQAGSRAADDAKVVIASVPTLARSGARLSRLQPDEFS----IVVVDEAHHAVAP-SYRRIFDHFGLF-----EPNVSRYLIGFTATPRRGDKQGLGEVFQEVCYARDMREMIADRYLCPITGWRVASDLSLDHVKVRHGDFIESQLAHAVNIPLRNSLLVKAYRDFAPGR----------RAIVFCVDVAHAKDVHRVFAEAGIRAATVWGALSRDQRRSTLAAFSAGEIDVVTNCNVLTEGFDEPRVDCVIMARPTKSKLLYAQMLGRGTR 341
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig761.15777.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
| Match Name | E-value | Identity | Description | |
| Helicase | 0.000e+0 | 87.32 | C-terminal domain-containing protein n=1 Tax=Ectoc... | [more] |
| Uncharacterized | 9.140e-241 | 91.95 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 4.460e-106 | 83.06 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| P-loop | 1.130e-94 | 43.03 | containing nucleoside triphosphate hydrolase prote... | [more] |
| ResIII | 5.690e-68 | 80.38 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| DEAD/DEAH | 6.340e-58 | 37.22 | box helicase n=2 Tax=Deltaproteobacteria bacterium... | [more] |
| DEAD/DEAH | 1.350e-57 | 41.41 | box helicase n=1 Tax=uncultured Desulfobacterium s... | [more] |
| Uncharacterized | 2.700e-56 | 38.98 | protein (Fragment) n=1 Tax=Acidobacteria bacterium... | [more] |
| DNA | 4.140e-56 | 41.19 | helicase, phage associated Type III restriction en... | [more] |
| Uncharacterized | 1.520e-55 | 40.23 | protein n=1 Tax=Acidobacteria bacterium TaxID=1978... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 899.4 |
| Seed ortholog evalue | 8.3e-259 |
| Seed eggNOG ortholog | 2880.D8LIE4 |
| Preferred name | irc3 |
| Model size | 3090 |
| KEGG ko | ko:K17677 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000002,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022613,GO:0031974,GO:0031981,GO:0032042,GO:0033676,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 |
| Exons | 15 |
| EggNOG free text desc. | DEAD DEAH box helicase |
| EggNOG OGs | 2QT4U@2759,COG1061@1 |
| Cds size | 1674 |
| COG Functional cat. | KL |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko03029 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842423.250984-UTR-E_fasciculatus_S2_contig761:12520..12676 | 1696842423.250984-UTR-E_fasciculatus_S2_contig761:12520..12676 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig761 12521..12676 + |
| 1696842423.262964-UTR-E_fasciculatus_S2_contig761:13147..13216 | 1696842423.262964-UTR-E_fasciculatus_S2_contig761:13147..13216 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig761 13148..13216 + |
| 1696842423.2726429-UTR-E_fasciculatus_S2_contig761:13422..13509 | 1696842423.2726429-UTR-E_fasciculatus_S2_contig761:13422..13509 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig761 13423..13509 + |
| 1696842423.2852929-UTR-E_fasciculatus_S2_contig761:14180..14276 | 1696842423.2852929-UTR-E_fasciculatus_S2_contig761:14180..14276 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig761 14181..14276 + |
| 1696842423.301593-UTR-E_fasciculatus_S2_contig761:15035..15059 | 1696842423.301593-UTR-E_fasciculatus_S2_contig761:15035..15059 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig761 15036..15059 + |
| 1696842423.4201336-UTR-E_fasciculatus_S2_contig761:23917..24901 | 1696842423.4201336-UTR-E_fasciculatus_S2_contig761:23917..24901 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig761 23918..24901 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842423.3129115-CDS-E_fasciculatus_S2_contig761:15059..15160 | 1696842423.3129115-CDS-E_fasciculatus_S2_contig761:15059..15160 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 15060..15160 + |
| 1696842423.3262246-CDS-E_fasciculatus_S2_contig761:15546..15697 | 1696842423.3262246-CDS-E_fasciculatus_S2_contig761:15546..15697 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 15547..15697 + |
| 1696842423.3362842-CDS-E_fasciculatus_S2_contig761:16379..16504 | 1696842423.3362842-CDS-E_fasciculatus_S2_contig761:16379..16504 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 16380..16504 + |
| 1696842423.3455813-CDS-E_fasciculatus_S2_contig761:16626..16732 | 1696842423.3455813-CDS-E_fasciculatus_S2_contig761:16626..16732 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 16627..16732 + |
| 1696842423.357418-CDS-E_fasciculatus_S2_contig761:17414..17524 | 1696842423.357418-CDS-E_fasciculatus_S2_contig761:17414..17524 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 17415..17524 + |
| 1696842423.3665698-CDS-E_fasciculatus_S2_contig761:18245..18328 | 1696842423.3665698-CDS-E_fasciculatus_S2_contig761:18245..18328 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 18246..18328 + |
| 1696842423.3753803-CDS-E_fasciculatus_S2_contig761:19710..19867 | 1696842423.3753803-CDS-E_fasciculatus_S2_contig761:19710..19867 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 19711..19867 + |
| 1696842423.3839667-CDS-E_fasciculatus_S2_contig761:20551..20636 | 1696842423.3839667-CDS-E_fasciculatus_S2_contig761:20551..20636 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 20552..20636 + |
| 1696842423.3921516-CDS-E_fasciculatus_S2_contig761:22236..22383 | 1696842423.3921516-CDS-E_fasciculatus_S2_contig761:22236..22383 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 22237..22383 + |
| 1696842423.4001184-CDS-E_fasciculatus_S2_contig761:22873..23002 | 1696842423.4001184-CDS-E_fasciculatus_S2_contig761:22873..23002 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 22874..23002 + |
| 1696842423.40929-CDS-E_fasciculatus_S2_contig761:23437..23917 | 1696842423.40929-CDS-E_fasciculatus_S2_contig761:23437..23917 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig761 23438..23917 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig761.15777.1 >prot_E_fasciculatus_S2_contig761.15777.1 ID=prot_E_fasciculatus_S2_contig761.15777.1|Name=mRNA_E_fasciculatus_S2_contig761.15777.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=558bp
MYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGS LDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSTGALSTAVNNDVR NEAAARAMLEFGAGEPSSSGKKRSPRGIAFCADVRHAHDLARVLNEHNIS AMAIDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCR PTQSAPLYMQMLGRGTRPWLPPTPQANQPDMGADSTASRRRSDIAGSPKP RMHVIDLVDNCGKHKASTCNSYTRAQRLMSTALGLSSGFCGDDASTDGMG GAFSVEHVGSLAAEAMSLVDADGAAEVGDACSHPLLEAKTPRELALLVKH YRLLQGAKTAETMLTVAGKGIGDGIPPPGWDLSQLSVGDRIGKDSFLRVV VEAILLGYEEGQDDDESEGFDDEDVDYDDIDHDGNDNDDEDGYESSFRKP HQRAKRRHFPRAHIRNRPSLRRRKKKNFAAGTATVHMRHASSGTIFSWRT SGVKDTSGAELHEGASYRLVATIAEALAAGGAEGAGEIGVTRCRLTLVTA DASSGRR* back to topmRNA from alignment at E_fasciculatus_S2_contig761:12521..24901+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig761.15777.1 ID=mRNA_E_fasciculatus_S2_contig761.15777.1|Name=mRNA_E_fasciculatus_S2_contig761.15777.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=12381bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig761:12521..24901+ (Ectocarpus fasciculatus EfasUO2) CCGGCAGGAGCGACAGGGTCGATTAGCGTGCTTCGGCCTTACCAGTCCTC
GGTGATCGACCGGGCCGTGGAGCTGTACGGACAAGGAACCCGGCGTCTTT
TGGTTCCGCTGGCAACGGGCCTCGGCAAAACCGTGGTCTTTACACACCTT
CCCCAGGTATATCCAGACATTATCCCTCCTGTCACCATTCGTTGCTATTA
TAGACGTCCCTCGGTGTTCCTTCAGCCCCCCCCCCACATCTGCGTGAACG
AGACCGGGCATTGTACGAACCGCAAGTTGGGGCTACTACTGTTCTCCATG
TTCCTATTCTTCGGAGGTTTTCCTTTTTTTTGTGTCTTGGGTGGTCTTCC
CTTCCCAGTTTCTCGGCATTTACCGCGACGATACGTGTCGCCAGAGGTTA
GCCGAAGGTGGACGTGGTTTCTGTCACTATTGCTTCACCTATCGTACAGC
TCTTCTATTTTGCCGCAACCGCTACGAAGCTACGAAGACCCTCTGCTTGG
ATGGCCGCTGAGCCGCTTTGTGAAACGATGTTGCCACATTATCCACGCGT
CCTTTGGGAGATTGATCGAAGCCAGAGATGAAAATGTTAACGGCGAGGGT
CGCGGGCGTTGTCGATTCTTTCGCCAGCAGGCGTTCCCGGAGCTGTCCCG
GCGGGGAACGTTAGTGCTGGTGCATCGCGACGAGCTCGTGCAACAGGTGA
GGTACGCCCGTTCCTAACTCACGGTTCAAGCGGGCTCCCTCTGCACAGAC
ATTCCCTCGTTCCTGGAAGGTTGCGGGATTCACCGATGATGTGGGGCTTG
CCGGGAGGCGTCCTTGGAGGGGCCAGAACGAATATATCCAAGGATAATGT
TTCGTGTGTGCCATTTGTTCAAGTTTGTCTGTCTTTCCTTTGTTCTCGCC
AGGCGGTGGCGTCCTTCGGAAAGTTCCTGCCCCATCTCTCGGTGGGGGTG
GAAAAGGGGCCGGAGACCGCACACGCTGGGTTAGATGTGGTGAGCTATTA
GGTGATGTTGAAAGCGACCGCGTTGGTGCTGTTTGGTGCTGTTTGGTGAC
TTGGAACAAATCAACCACCAACGAACACCATGAAATAGGGGTTAGCGTTG
ATGCCAACACATCTGTGTAGGTTTGGTGCATTACTGTATCGAGAGATTGC
TAGGCACAACCAGCCGTTCGTTTTTTCGGCAACCCCGTGTATTGGTATGG
CGTCACAGGATCGTCTTCTGTCTACTTTGCTGTTTTGCTCGATTTTCTTT
GTTTTCTTCATGAGCGTGGTTTGTGCCGCCCTTGACCAAATTTACTTGCT
TGTTCGGGCGCGCTTTGCATACATACTACTGCGAGCCCACGTGAACCGGC
GTTCTGCTGGCACCGGCAATGTATGCACTATGTTTGAAGGGGCGTTCATC
TCCACGACCTGGATTCACTTGCTCCGGGACACCTCTGGGTTACCACATAT
TCTTTCGTGGCGTCGTTCGCATCGCCGGTTGGCCCTGCCTTTTTTATTCG
GTTACTCTCATGAAGCGGAAGCGGTCTGTAGACTTCCAACGTGTTTGTTT
TTTTTTCGTTCGTCCCACGTAGACTAAATATCGTCGCAGGCTTGGTCGGG
TCCGTGTGTCAGATCTTGGTTCGGTGAATTTGCGTGCGTACTTTCTTTTT
TCACGACAAGGTGGTCGCTTCGGTTCAGACCCTTGGGAGGCGCGGTTCGG
GAGCGGCGAGACTTCGAAAGTTCGCCAACTACGGCGGAGTAGTTGTCGTC
GACGAGGTAAGTGCTTTCGTCGCCGTCAATTTAGCGTTGTCACATTCGTG
TCACCGGTATTGTCCTTCACAAAACCATATGCTCATTGATTCGGCAAGGC
TACCCAAATGTAAAAGCTTTGAAGATTATGTTGAGGTCGTCAAATATGAA
ACGGTTTCAGAGGTTTCACTTGTGAATACGGGTTGTTTTAGCCGCGGAAT
GTGCTGTGACGGGTGGCTGCCAGCATGAAGCCGCATATGGTCGCAGTGAA
ATCGCGACCCGGTTTGAAAATGCAAGGTTTGCGACGGGTATCTTGTGGTG
TTACACGAAGAAGCGCGCCGCATCCCGGCCCACTCACACCCTCTCAGGCA
TCAAGATATAGGTCGGTTGCTCGTGGACGCCTAAAACTTGATCGTATCAT
CCGCATTTTCGACGAGACAGAACCTCATGAAAAAAACGTCTGCCACGGTG
AAGACGAAGACTGGAGGTGGACACCGTTGATAAAACGATGTTCTTGGGAA
TCTCGCAGCCTTCTACCATCGGCAATCGTTCAATAGAGAACCCTGGAGAT
TTTTCGAAGGCTGTTTCTCGGTTCCGCTTTCGGTTTGACAAAATAGCCAC
GTCGGTTGCTACATGGCACGTGGGCGTTCGTTCACGACGGGATAGCTTCA
GCCCTGTAGCAACCCCAGGTGCTCCTTTTCACGTGAGCGGCATACACGCG
CTTGTGACAGCGTCCGTGGCTCGTGATGTCGTCCTCTTGATCTCCTCTGT
TTCGCTGCAAGAAAGGCGCACCACGTGAAGGCGGGAGGAATGTACGACGA
CGTGCTCAACGGGCTCGGCGTCGGCAGCGCGTGCAGGGGGGAGACCCGGG
GCGGTCGCCTCCTGGCTGGCTTCACTGCCACACCGCGAAGGTTTGGCGAA
GTGATTTGATTGATAGGAATACACAGCAGTCAAGCTGCGCGGGTAGTTTG
ATGCACTTGCTTGTGGTACGAAACGTCAACAAGGGTACGGCTTTGAAGTA
CGTTGCCAGGGGTAGGCGGTGTTCCTCTTTCTCCTCCGAGGCGCATCTTG
TTTTCGTTGATGGTTTCCTTGATTCCCCACCCGCCGCGCATGAGCAACCG
CCTCCATGCTCTTTCCATCTTCTGCCTCACCACAACCACGCAGAAGTCCA
TCATGTCAAGCCTCGTAGAGAAGAGGCCCCACGAAGTGAACGGCCGTGCT
CTCATCTCCCCAACTCGTCCTTGCCCCCCTTGCGTTTTCCTCTCAAAATT
TCCGTTGCCCTTGTGCCGTCGAAAAGAGCGGACGGGCTGTCCCTGCGGCC
TTTCTTCGACCACAGCATCGGGAGTCTGGACCTCCACTGGGGCATCGCGA
ACGGATACCTGGTCGACATCCACGCCTTTGCCGTCAGAACCACCACCGAC
ATCGCCGCGCTGCCCACTCGAATGCAGGTGTCGAAGCAGTATTCGTTGCT
ATTCTTGCTCTCGGTATACCGTGTATGACGTAAGATAACACCCCCCCTGG
GGCCGATTTTCAAAGCTCAATTACGCCACGACGAAGGGGATGCATAAACG
AAACGATACATTTCGGAAAGATCCTAACGAGACAGCTCCAACCCCACCGT
TTTCATCATCGTGACTCTTTGTGCTGTTGAGAAACCGAGCTTTGAAAATC
GGTCCAAAGGGTGTGTTATCTTGTGCCGTATACTGTAGTTGCTTGTGGTG
GTTGAGGTGTTTCTGTCTGGGGATGATGTTGGTAACATCGTTCGGCGAAT
CGCCTAGCCAGAGGTGCATTTCTCGAGTTTTGTCATGCATTCGGTGTCTC
CATCACGCATTCTCCTGGTGGTCGTGTAAAACGTGTCTACCGGTTGGCGG
GTGAGGGTTTAGCCCAATCTTTTTCGGGCGGGGGGCGGGGCGTGGTCGGA
CATGTGCCCTCGACGCGCGAAACGAAGGGAACTTGCTCAAGTTCTCCTCT
GGGTATTCCCGTGTTGAAACGCAATCCACCGTTCCCGCTACTTCCTTCTG
GTCCATCCCTTCCTCCCCCGAAGAGAGATCTGTGGACAGTTTCGACGTCA
CAGCTCGACACTGAGTTGAAATCATTGTTCCTGGACGTTCCTGGTGTCCG
TTTTTTTAGGATTTTTCCACCGGCGCGCTGTCTACCGCGGTGAACAACGA
CGTCCGCAATGAGGCCGCTGCACGCGCGATGCTGGAGTTCGGTGCGGGTG
AACCCTCGTCTTCGGGGAAGAAAAGATCCCCTAGGTGACAGACAGCCTGG
TGAAGTGGAGTGGAAGTCGTGCACGAAGCGTTATTCTGCTGTAAGACACA
GTTTTCTTCCTTGCCTCCCCTTGTTTTTCAGCGGCAATTCATTTTTCTTC
CGGCAGGGGAATCGCCTTCTGCGCGGACGTCCGTCACGCGCACGACCTCG
CCCGCGTCCTGAACGAGCACAACATATCGGCGATGGCGATCGACGGGGGC
ATGAACAAAAAGGTGGAAGAGACTATATCGATGGAAGTAAATGTGCACTG
TTAACGAGCGGACAGTGTGTGCCATGGGTAGTGCGGAGTGGTGAACAAAC
ATGGCGGGAACGTTAAAGTAAAGACAGAGTTGGGGAGGGGTCGCATGCCA
CGGTGCATGGGGATAAGCGATAAGGCATTGTGGGAGATCCGAAAGATACG
GACAGAAAAAAGATTCCACATATGTGTTTCTACGAACGAAAAGCCAGCAT
CGATAGACGGGATGTATCGTGCAGGTAGTAGGGTCGGCCGTGTTTGTTCA
TCAAGTATGCGTTGGAGGTATGGGCAAGCAGGACAGGGAAGAAACGAAGG
GCACCAAGGCTTAGGACATGAAAATCGTCGTAGCGGAAGTTGCGTCGACA
CATCAACGTACCACCCAAGTAGGCTACGCGTTGCGGCTGTATTTGTTGCT
CTTGTGGAGGTGCGTTTAAACGATGATTTCACAACGAACGAATTCTTAGC
TGCTCTCACGCCAGCCCCTACCATGATCACTGCGCTTGGCTCGAGCACTC
CTGTGCACACCAACAAGAACATTCTAGATCTCGCCGTTTTCTCCAACTTT
AACCCGACTCGGTTGTGCTCCACTAGGCCACAAGAGGCTACGCTGAATCT
TGTTCTTCCGGTTGTTTGCCCGTACCGCTGTGTCTCTGAGGCAGGATAGA
GGACGGGCGTTGGCGGCCTTCCGGTCGGGGGAGGTTTCCACTCTCACTAA
CTGCGGCGTCCTCACGGAGGGCTTTGACGCGCCCTTCTGTGACACGATTG
TCATGTGAGCGAGTTTAGGAATGAAGAGTAGCAGAACGAATACGACGCGA
TGCTTTGCCGACGTTGGTCTCGGTATGGGCGAGGGCACTTGCTTTTCGCA
ATTAATCGACAAACACTGCCTGTTGTGCTCTTCAAATGGTGTCCCCTCTC
TGCTTTCACTTCCTGGGCGAAGAGTCCCTGCAGTGCCGATTTCCGGCTCC
AACGTTCATATATGCGTAGTAGTTCATGCATGTTGATGGTCTGGGAAAAC
GAGGCCTCCAACAACCAGCCTGACACTCTTTCACCAAGTTCTATTGCCCC
CACGATAGTCCGTCGGTAGCCCGCGCGATATGTTTGTTTGTCGCACAGAA
GGAATGGCTCGGCACGCTGAAAAGGCTTTTGAAGGGAGCTACCGTTAACC
CTCGATGTGCCTGACCCATGTTCTGCGCTAGAAATACAAGAGAATATCCT
CTGTAGATTGTTCGATGCTCGAACTGTGGTAGATGAGCGTAAAGAGGGGA
AAAAGAACTTGCTGTGCTGCCCCCTGCCCCTAATTTTCGGGTCAATTTCC
AAAGACTTAGAATTAGGTGGAGGATATATTGTACTGCCCCGAGAAAAGAG
CCTGAGCGATCAAGAACGAGCCTGAGTGATTAATGCAAGAGAATATTTGT
TGTACATTGTACAAAGATTGATACACGGCATCCCCACGCAAACTTCGTTT
TCTGAATATCCCTTGCATCGTTTAGGTGCCGCCCGACCCAGTCGGCGCCT
CTTTACATGCAGATGCTTGGCCGAGGCACTCGTCCGTGGTTGCCACCAAC
CCCCCAAGGTGCGGAGACCCCATGAATCACGGACAGGTCCAGCTGCGACA
ATACCCAAAACAATGCGCTATTTTCCAGTGTTTTCATTGGTCCGCCGGGT
AACGCTAGGTATAGGTGCTAACGAAGTACACACATAGAGATCTCTTTTGT
CCTGGCTAACACCTGTTTCACCTCTTGGTCGACTAAAAGCGGAAATAAAC
CACCCAGCGGGTGTTCACTTTCAGGGACAAGCTATCTTCGCGCTCTTGTT
TGAGAACAATCTGTAGTGCAAAACTTTGGGGCACTCAGGGTGTAAACATA
GCGCGGCGTGCGGACGAAACGACACCAGGACGACCTTGGGGGCAATCTTG
TTGTGTTTATGGTGCACCCCTACGGCGACTATACTAGGTTTAGGGTAGGG
TTCTTGACTGAGAGCACGTGTCTTCATGGCCAAGTTCTTAGATTTTGGAC
TTTTCGAGGCTCAAGTGCTTAGCTGCTGCGTTCTTGAGTGGTGGCGTGGT
CTGTACAGCAGTACGTGCCTTTTTGGTCGAATCCTGGCCGAACCCATAAT
TTGCAGCCCCCCGTGTCGTACCTGGGGTGCGGAGCTGGTCTTGTATGCCC
CTCGTCTTTTTTTCATGGTTCAAGGGCAACACGGCTACTAGCTTTGAGCT
GGATGAGGAGTTCAAGTAGAACTGGTTCACAAACGTTTACTTCCTATTTC
AACAAGTTCCTCATCGGTGACACATCGTTCGATTCAGCTCAAGAGTGTCA
GTCGGGGTTGAGATCGTGGGTATTTATTGGGAGAGGGTGATATTTGGTGT
GCCGCGAGCGATGAGTTGTGAGCCTGGTCAGCGAACCCTGTATGGCGCCA
CTCGCGATGAAGCAAAATGCAGCTCCTACTGTGTGTGTGTCTGTAGGGCC
GGGCGCTTGGGTGCACATGGACGGTTAGAGAAAGAGAAAAATACCAAAAA
ACGCAGCTCACACTCTTTGTAGCAGCAAGAAAAATGCTTCATCATGAAAA
TGGTACGATGCGAGAGCTATCACCCCTTCGCTTCAAGATCCACCAGCACA
CCAGCCGCCAACGCAAGCAGCTGGCGATAGTTCCAAAGTCGGCTATGGCG
AGTCCGTAGCGGCAGGGACTCGTCGTCTTGAAGGGGCTCGTCGTCTTGAA
GGGGGCTCGTCGTCAGCGGTCTCTTGACTCAACGCGCATGTGCCCCGCTC
TCTCTCTCCCACCTCCTGTACGGACCGCGAGGCCTGTGTGTCATCTCAAT
ACACGGCCTTTGGCGGAACACCAACGACTCCTCCCAGGGATGGGAAACGG
AGTAGCGAAACGAAATCGTCGTAGAACCAACTATAATGTGGCATGCTAAT
GAGTACGAGCGCCCTCCTCCCCTCCCTCCGTCAACTGCAGCGAACCAGCC
GGATATGGGTGCTGATTCGACGGCCTCAAGGCGACGAAGTGACATTGCGG
GGTCACCCAAGCCCCGCATGCATGTGATCGACCTGGTCGACAACTGCGGG
AAGCACAAGGCGAGCACATGCAATAGTTACACGCGGGCTCAGCGCCTGTT
TGATTAAACAACCTTGCCGCAGTTTGTGATTCGTGGTTTGCACCACAACG
CTCGACATTCCTCCGGTCAGATGATGAGTGGGTGTTCTCTGTTCCAAACC
AGAAGAACGCACGATTCTACCAAGTCAAGGAACAGTAAAGCAGCAGCAGC
AACACCAGCACCAGCAGCAGCTTTTACTGCGGTGTGCCGTCCCGAACAAG
GCAAAGCTCTATCCGGCACACCCCTGCACAATACCGTGATAGTAGGCAAA
CCGTGCGGTAGATGCAACACACCTAGGAGGGCTATATCGGCACTGCCGGG
GGCAAGAGGTTACACGATGATATTCTTTACTCTCAAAGGGTAAGTCACCT
TGTTTGTATTTCACTTGCATCTTTTCGTACCTTCCTCGTGGTAACACACG
AAAGTTACCTACAATGCCAAGGAGTTAAGATATTTTCCAGGGGTAGGTCG
ACAAACATCTCGCGCGCCCCAGTGTCGCATCGAGCTTATCGATGCTTTTG
GTATGCTGCTGGAGGGAGGGTTGTAGACACATCATCACACAACACAAACG
CTAAGTGCACAAGAAACTTAATTTATGTCGGCCACGAAAGACGGAGACAG
TTAATAATACGAGCCCGTTTTTGCATGCGCGATCATCGGGGCTGGCGTAA
CGGCGTCCTATACTGGAACCCAGGTGATGAGCATGTCGACTGCTTTAGGG
CTTTCCTCCGGGTTTTGCGGCGACGATGCTAGTACGGACGGAATGGGTGG
GGCGTTCTCCGTGGAGGTGAGAGATAGCCCGCCGTCGATTGACCGTTTGG
ACGTGAATGCGTTGTTTGATGGAAAAACTTGTAGCAATGCAAAGTTGATG
GTGCGGAATATGTTTTCCATGGGATATATTACCGTGGGATAGCGTTTTTT
CGGCGTGGTAAACGGTATGGGTCCATCCGAGATGTGCGCGGCACCCCTAT
TGTACGTGGTGTCGCCGTCGGCGGGTGTGTGTGGTAAGAGGAGAGGATGC
AAGAAATCGTCTGCTCGGCGACGGCACGATGAATTTGCCCTGTCCCGCTC
CACGGTAAGCTTTACCGGCATGCTACCCCCAGTTCGGATCATCTAAGAGG
CTAGCGTGCTTGGCCACTCAGGTGGGCGCAGCTTGTGCTTATGCCGAGTT
TTTACAGCGGCTTGGCCAAGCCAGGCCGAGATGGAAACGTCGTGTTTTGT
TTTGGCAGCCAAGTCGGTGGGAATTGCTGCTAGAGTGCACCAACTGAGAG
CGCATCATTGCCATACTTATCTGTCACGAATTCCAGACCACGAAATGGAT
CCCCACCAGCACAAGTTTTTCCGTGGAAGACGGCAAGACACTTCCTGTTT
TCACGCAATCTACCGACTGCAGTCTCCATAAATGCATGCTCAGTATATTC
TTCCCGTCATTCATGCCACGACTATGTCCCCCTTTCACGCATCGGATTGA
TATGGCAAGTCGGTTTGAACTCACCCTGCACAACAGTACCACCTTCTTTT
AATAAAACCCAAAGCCCAACGCTCGAATTAGTCAGACGCACCTGGACCAA
CATGTCTTCTCTGAAAAATGTTTTCTGGTCCATCACTCTCTCTCTCTCTC
TCTCTCTTGGCACTTACTATTATATTCCCGTCAGTGTTCGCTCGCTCCTT
CTTCCTCTCGTCTTTCTTCTCCGCGCACGCGTTCAGAATCCCGCGCTCGT
CAGCACCCGTTTTTAACTCGGGATTTCGCCGTAGGATGCTCTTCTCTTTA
GACGTCTTCATATCGAGCATGTGGAGAAACGCCGCTCGAATACAGCAGTG
TTGGTCAGCAGTGTTGGTTTGCTTCGTCGTTAGACTGTGTGTGGGTGAAT
CTTCATGCTTGCGACGTATTCTTTGCCAGGGAAACAGGCAACAGCACTAC
CCCTCAAGCGTTTTGCCCACCGGCAGACACAATCTGACAACGAAGCTAAC
CAGCACTTTCGTTTGGGCAATTTCCTCCGTTTTCGATACGAAGAAGAGCA
CGTTGCAGACGGGTTGCGAGTTGACGACCGATTGTGTCGAGAGCGTGATT
CTGAATGCGTGCGTGGAAGTGAAGGGCAGGGGTGGAAGGAGCGGGCGAAC
ATTAAAGGGTTGTGCATAGTGCCGAGGGAGAGAGCGTAATGAGCGTTGCC
TGAGTAGAAAGACGTTGTGAGAGAAGATTTAGGGAGGCAATGTTAACGCC
GTGTTGTTGTGGCGTTGATGGCGTTTACCTTGTGTTTATCCCCCTACGGC
CGGATACCTCCGTATGGAGCCAACAGGCCATTGTTCATAGCGACCCTCCA
AAGTGTCACCCCCAAAATTCTATCTCTCAGTCTCGAGGCGTCGTGCGTGT
GGTCTGTTTTCTGTAGCATGTCGGGTCCCTCGCTGCAGAGGCTATGTCTT
TGGTCGATGCTGACGGCGCCGCCGAGGTGGGGGATGCTTGCTCTCATCCC
CTGCTGGAAGCCAAAACCCCTCGGGAGCTTGCGCTGCTTGTGAAGCACTA
CCGTCTCCTGCAGGTGAGATCGAAGTTCGGTGGCCGTCACCGTGGAATTG
CATTGCCTGTGTCTTCTGCTTTGCTGGCCGGGTTCGACGGGTTTTTTTGT
GTTGCGTTTTGCTTGTCTGCCCGGTGAAGATATGGGGGGTACCCAAACGA
TCTCGTGAGTGGAGGTGATGCTCAGGAACTGGGGGTTAGACCGCATACCT
CACGTACGCAAGCGCTCGCAATGCATTATTTCGTCCTGGTTCTGCACAGC
AGCTCCAAACGGCAATTGAGCGGACGAAGTACAACGGAAATTCGAAGCTT
TGAGAATCAAAAGCCATAGCTTTGTGTTCAGACATTATGGAGACACAGCA
CGGTACACTCAAGATGGGCGTGAACTGTATTTTACAAGGTTCGGTACTGG
CTTGTGAGTCACTGATGAACCGTGCGTTTGGAAGAATTGGCAAGCTAAGC
TGCCGCGACCACCTCGCCGTTTGTCATCCCCCCCCCCGCCTTGACCACTT
TAGGGAGCAAAAACAGCGGAGACCATGCTGACGGTGGCAGGAAAAGGGAT
AGGCGATGGAATTCCTCCTCCCGGTTGGGACTTGTCCCAGCTTTCCGTCG
GAGATCGAATCGGAAAGGACTCGTTCTTGAGGGTGAGTTGGCGGTTGCAA
CTGGCGCTGCTGTTGTTGGGGCAATTATTGAAGCTGCTGATGTTTCGTCG
TTGGTCGTCGGTTGCTGTTCTTGTCGTTGTCGGTTCTCTCCACGACGATG
GTGCGGCGGTCGTGCTTGAGCATGCTCTTGGGTTTTCTGTTGTCATCAAA
GTCGTGGTCATTGGTGCAAATAGTGCATCTTGCCAGCAAAGTAAAACCGG
CTCTTCATTTTTGGAATATTACGCATCCCTTCCCTCTTTTCCTGAGTAAA
CCATGCCTACCGTTGCTATTCCGTTATGGGCACTTGGGCGTTCGGCTTGA
TGGTGGGAAGGTTTGCCTTCACTGAGATGCGCTCCTCCTCAATTATCAAA
TATCTGAAGGGTTGAAGGCTACCACCGGATCCATACGTCCTGCCCCTATT
CCCCCTTCCGAGCCAAGGTTGTCGTAGAGGCCATCTTGTTGGGGTACGAA
GAAGGACAAGACGATGACGAAAGCGAAGGTTTCGACGATGAGGATGTCGA
CTACGACGACATTGACCACGATGGTAACGACAACGACGACGAAGACGGCT
ACGAAAGCAGCTTCCGCAAGCCGCATCAAAGAGCGAAGCGACGGCACTTT
CCTCGAGCCCACATCCGAAACCGCCCGTCCCTGCGACGGCGCAAGAAAAA
AAACTTTGCCGCTGGTACCGCGACCGTGCACATGCGCCACGCATCGTCGG
GCACCATTTTTTCATGGAGAACATCCGGGGTTAAGGACACGAGCGGAGCG
GAGCTGCATGAGGGGGCGTCATACCGGTTGGTGGCAACGATAGCAGAGGC
GTTGGCAGCAGGGGGGGCGGAAGGAGCGGGAGAGATCGGGGTAACGAGAT
GTCGGCTCACGCTGGTGACGGCCGATGCGTCTAGCGGCCGCCGATAGGTT
ATGGTTTGCGAAAGAGTGGAGGTTCGTGTGAGCTGATGAGATGATTGGAT
GGGCTGCACGACAACGTGGACAGGCCCGCAGCGCGCGACCCCGACCACGC
CGACCCTCGCACAGCCGTACGGTACTTCGACCGATCACTCGCTATGCGTC
GGCAACGCGGCACCTGGGCCGAGTCCGCCGAGCGTCCTCTCGCTCGGCTG
CTACGGGAGCAGCGCTTGTTCTCGAGGCGTCAATCTTGAAATCGGGATAA
CCGTCAGCATGTTTTCTGTGTGCATAGACGACTAGACCGACCAGTGTAAG
GCTGTAGACAGGGACCGAGGTCGTTGGAAGAGTGACGTGACGACCAAGGG
CAGTTCTCAAGTATAAGGTAATCAAATAGCTGCAACATGTACCACCAAGG
CACAAGTTAGACCAATCAGGGTGCTGTATTGATGCATATCGAGAGTGACG
GATGTCTTTGTAACGACTTTTATGGACGTAGGACAGTCCGGGCGCCGTGA
AGCCTCGCGCACATGATCGCTCTTGCTTTCTACCCTCAGCTCGACTTTCC
AGAGCTGTGCGCGGAATGGGCTTGAGTCAAGTACGAGACACAAACTGTCG
AGGTAGAACACACAACAACTCTTGAACGCAAGTGCATCCACATATCGAAG
CGAGAACCTGTAGAACTAAAGAAGCGGAACTACAGTTCTCTTCACGTTTT
GGTGCGGGTGTTCCAGAATATTCTCTGGCATGTATTTCGGGTGTATCAAC
TGGGAAACAACGGTTGAATCGGAATTCTTGCGCTTACGGAGTCTCGATTT
ACCGGCATCGCACGGTATCTTGCCGAGATCGCGGAGCAACTCGTTTCACA
CTTTACGCGTGTATGATGCTTGCGAGATGGTCTTACGTTGACTGTTTGGC
CCGTTTCCTAGCGTTGACCCATCATCGCGAATTGAAATGGCTTGCGTGTT
GTCAACAGTACAGACACCCCGTTGACCATCC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig761:12521..24901+ >mRNA_E_fasciculatus_S2_contig761.15777.1 ID=mRNA_E_fasciculatus_S2_contig761.15777.1|Name=mRNA_E_fasciculatus_S2_contig761.15777.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1674bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig761:12521..24901+ (Ectocarpus fasciculatus EfasUO2) ATGTACGACGACGTGCTCAACGGGCTCGGCGTCGGCAGCGCGTGCAGGGG GGAGACCCGGGGCGGTCGCCTCCTGGCTGGCTTCACTGCCACACCGCGAA GAGCGGACGGGCTGTCCCTGCGGCCTTTCTTCGACCACAGCATCGGGAGT CTGGACCTCCACTGGGGCATCGCGAACGGATACCTGGTCGACATCCACGC CTTTGCCGTCAGAACCACCACCGACATCGCCGCGCTGCCCACTCGAATGC AGGATTTTTCCACCGGCGCGCTGTCTACCGCGGTGAACAACGACGTCCGC AATGAGGCCGCTGCACGCGCGATGCTGGAGTTCGGTGCGGGTGAACCCTC GTCTTCGGGGAAGAAAAGATCCCCTAGGGGAATCGCCTTCTGCGCGGACG TCCGTCACGCGCACGACCTCGCCCGCGTCCTGAACGAGCACAACATATCG GCGATGGCGATCGACGGGGGCATGAACAAAAAGGATAGAGGACGGGCGTT GGCGGCCTTCCGGTCGGGGGAGGTTTCCACTCTCACTAACTGCGGCGTCC TCACGGAGGGCTTTGACGCGCCCTTCTGTGACACGATTGTCATGTGCCGC CCGACCCAGTCGGCGCCTCTTTACATGCAGATGCTTGGCCGAGGCACTCG TCCGTGGTTGCCACCAACCCCCCAAGCGAACCAGCCGGATATGGGTGCTG ATTCGACGGCCTCAAGGCGACGAAGTGACATTGCGGGGTCACCCAAGCCC CGCATGCATGTGATCGACCTGGTCGACAACTGCGGGAAGCACAAGGCGAG CACATGCAATAGTTACACGCGGGCTCAGCGCCTCATGTCGACTGCTTTAG GGCTTTCCTCCGGGTTTTGCGGCGACGATGCTAGTACGGACGGAATGGGT GGGGCGTTCTCCGTGGAGCATGTCGGGTCCCTCGCTGCAGAGGCTATGTC TTTGGTCGATGCTGACGGCGCCGCCGAGGTGGGGGATGCTTGCTCTCATC CCCTGCTGGAAGCCAAAACCCCTCGGGAGCTTGCGCTGCTTGTGAAGCAC TACCGTCTCCTGCAGGGAGCAAAAACAGCGGAGACCATGCTGACGGTGGC AGGAAAAGGGATAGGCGATGGAATTCCTCCTCCCGGTTGGGACTTGTCCC AGCTTTCCGTCGGAGATCGAATCGGAAAGGACTCGTTCTTGAGGGTTGTC GTAGAGGCCATCTTGTTGGGGTACGAAGAAGGACAAGACGATGACGAAAG CGAAGGTTTCGACGATGAGGATGTCGACTACGACGACATTGACCACGATG GTAACGACAACGACGACGAAGACGGCTACGAAAGCAGCTTCCGCAAGCCG CATCAAAGAGCGAAGCGACGGCACTTTCCTCGAGCCCACATCCGAAACCG CCCGTCCCTGCGACGGCGCAAGAAAAAAAACTTTGCCGCTGGTACCGCGA CCGTGCACATGCGCCACGCATCGTCGGGCACCATTTTTTCATGGAGAACA TCCGGGGTTAAGGACACGAGCGGAGCGGAGCTGCATGAGGGGGCGTCATA CCGGTTGGTGGCAACGATAGCAGAGGCGTTGGCAGCAGGGGGGGCGGAAG GAGCGGGAGAGATCGGGGTAACGAGATGTCGGCTCACGCTGGTGACGGCC GATGCGTCTAGCGGCCGCCGATAG back to top
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