mRNA_E_fasciculatus_S2_contig7597.15762.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7597.15762.1
Unique NamemRNA_E_fasciculatus_S2_contig7597.15762.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 503 bits (1294), Expect = 2.560e-176
Identity = 249/303 (82.18%), Postives = 257/303 (84.82%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLW----------------------------FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHL SWR+WPPYVTKNVDIVIVMTF GF WTI+ AL+NGL RRSEGDILAKCYLER LAW ALCTHMFAFFIRVYRMWRIL+KHDENMWPAKYQIMLLSSISL P LVALLVPGAYVFDETVN C TTSTSRTV LAMN VGFYT+CY+W                            FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVV+LD QHV VRRVAIVYPALTTH VLWGSIGEPV+KKWT DEEYL SFTKGFSD
Sbjct:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVMTFGGFGWTISVALDNGLFRRSEGDILAKCYLERLLAWPALCTHMFAFFIRVYRMWRILVKHDENMWPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSD 303
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 4.350e-168
Identity = 256/402 (63.68%), Postives = 268/402 (66.67%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVM-----------------------------------------------------------------------------------------------------TFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAK--------------------------YQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            MSD+EVWEPL MVDYIMLGFVGTVQ FALGVC+HL SWR+WPPYVTKNVDIVIVM                                                                                                     TFAGFAWTIAGALENGLIRRSEGD+LAKCYLERFLAWSALCTH+FAFFIRVYRMWRIL+KHD++MWPAK                          YQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSR VVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSY VVVVV+LDNQHVYVRRVAIVYPALTTHAVLWGSIGEPV+KKWT D+EYL SFTKGFS+
Sbjct:    1 MSDKEVWEPLAMVDYIMLGFVGTVQTFALGVCIHLLSWRHWPPYVTKNVDIVIVMVGGQRSVDILGKAVTVLKGRTADSHSFGRQTAHKVEKVNICPKKGRSRFVCHKQRSYIPFRLLLGPFAPFPLPSSNPPRLPPPLALFVLLPSSIPLAAFLQTFAGFAWTIAGALENGLIRRSEGDLLAKCYLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKFLSVTFALDKVDLSRSTSPVLTTPVRYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYVVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSE 402
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 437 bits (1123), Expect = 9.810e-151
Identity = 208/276 (75.36%), Postives = 236/276 (85.51%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQH-VYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            MSDEE+WEPLTMVDY+MLG VGT QA ALGVCVHLF WRNWPPYVTKNVDIVI+MTFAGFAWT A AL+ G + RS+GD+LA+C LE+ L WS LC HMFAFFIRVY MWRI+++HDE++   K QI LLSSISLVPPL+ALLVPGAYVFDET+NSCNTTSTSRTV L MN VGFYT+C+LWFVC RQLR VRKQFNEYE +KWTLSCL LL+ SY V V +ILDN+H V  RR+AIVYP LTTH +LWGSIGEP++KKW  D EYL SFT+GFS+
Sbjct:    1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIMTFAGFAWTFANALDVGFVHRSKGDLLAECSLEKLLTWSTLCIHMFAFFIRVYLMWRIMVRHDEDVGSPKGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSE 276
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Similar (to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 3.130e-141
Identity = 193/259 (74.52%), Postives = 222/259 (85.71%), Query Frame = 1 
Query:   49 MLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            MLG VGT QAFALGVC+HL  WR WPPYVTKNVDIVI+MT AGFAWT A AL++GLI R+EGD LA CY++  L+WS L  H+ +F +RVYRMWRILIKHD++MWPAKYQ+M++SSISL P L A+LVP  + FDETVNSCNTT+ SR VVLAMN +GFY +CYLWFVCTRQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV +IL+NQHV VRRVAIVYP L+T+ +LWGS+GEPVVKK+T DE YL SFTKGFS+
Sbjct:    1 MLGMVGTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALQSGLIPRNEGDFLAICYIDTTLSWSTLAVHIMSFAVRVYRMWRILIKHDDSMWPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYPVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSE 259
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Similar (to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.790e-123
Identity = 177/275 (64.36%), Postives = 196/275 (71.27%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            MSDEE WEPLT VDY+MLG VG  QAFALGVC+HL  WR WPPYVTKNVDIVI+MT AGFAWT A ALE G+I RSEGD LA CY E   +WS L  HM +F +RVYRMWRILIKHD++MWPAK                                         VVLAMN +GFY +CYLWFVC RQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV ++L+NQHVYVRRVAIVYP LTT+ +LWGSIGEP+ +K   D EYL SFTKGFS+
Sbjct:    1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALETGIIERSEGDFLANCYFEVIFSWSTLLAHMMSFAVRVYRMWRILIKHDDHMWPAK----------------------------------------NVVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSE 235
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR8_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 3.010e-93
Identity = 135/235 (57.45%), Postives = 169/235 (71.91%), Query Frame = 1 
Query:    4 SDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAI 708
            ++ EVWEPL+  D+ +LGFV T QA AL VC HL  WR WPPYVTKNVD+VI+ TF+G  W ++  + +G IRR  GDILA C  ERFL+WS LC H  +FFIRVYR WRILIKHD+ MW   +QI+ +SS+SL+P +    VP    FDE  N+C+TT+ S  VVL M+ +GF  +CYLWFVC RQL+WVRKQFNEYETMK TL  +T+ L SY V+VV +L +  V  RRV+I
Sbjct:    3 AEGEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLRWRKWPPYVTKNVDVVIISTFSGVLWNVSMIISSGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRTWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTVTLASYGVIVVYLLADDLVLGRRVSI 237
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 4.510e-93
Identity = 153/274 (55.84%), Postives = 189/274 (68.98%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFS 822
            M+++EVWEPL+  D+ +LGFV T Q  AL VC HL  WR WPPYVTKNVD+VI+          A  L      R  GDILA C  ERFL+WS LC H  AFFIRVYRMWRILIKHD+ MW   +QI+ +SS+SL+P +    VP    FDE  N+C+TT+ S  VVL M+ +GF  +CYLWFVC RQL+WVRKQFNEYETMK TL  +T+ L SY V+VV +L +  V  RRV++ YP LTT+ +LWGSI EP + K   D+EYL S+TKGF+
Sbjct:    1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVIIS---------AARLPTRQPGR-PGDILAACDFERFLSWSTLCVHTVAFFIRVYRMWRILIKHDDQMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYPLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFA 264
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Signal (transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 1.660e-91
Identity = 151/275 (54.91%), Postives = 178/275 (64.73%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            M D+E WEPL  VDY+MLG V T QAFALGVC+HL  WR WPPYVTKNVDIVI+MTFAGFAWT A A+ +GLI+RSE D LA CY E   A  A  T +F                       + Q++LLSS  L+P L+A+L P  + FDET NSC T++ +  VVL M+  GF  +  LW VC RQLRWVRKQFNEYE MKWTLSCLT+LLFSYA+VV +ILD  H YVRRVAI +              EP   K T + EYL SFT+GFS+
Sbjct:    1 MPDKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAVGHGLIQRSEDDFLANCYFESTDAVPACPTRLF-----------------------RVQVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAW--------------EPFKMKLTGNAEYLYSFTQGFSE 238
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU03_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 7.220e-84
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1 
Query:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAK 372
            MSDEEVWEPLTMVDY MLGFVGTVQAFALGVCVHL  WRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRR+EGDILAKC LERFLAWSALCTHMFAFFIRVYRMWRIL+KHDENMWPAK
Sbjct:    1 MSDEEVWEPLTMVDYTMLGFVGTVQAFALGVCVHLLIWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHMFAFFIRVYRMWRILVKHDENMWPAK 124
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 8.190e-84
Identity = 127/167 (76.05%), Postives = 145/167 (86.83%), Query Frame = 1 
Query:  325 MWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
            MWRILIKHD++MWPAKYQ++L+SSISL P L A+LVP  + FDETVNSCNTT+ SR VVLAMN +GFY +CYLWFVC RQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV +IL+N+HVYVRRVAIVYP LTT+ +LWGSIGEP+ +K   D EYL SFTKGFS+
Sbjct:    1 MWRILIKHDDHMWPAKYQVLLMSSISLGPLLAAILVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYVICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNRHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLGGDTEYLNSFTKGFSE 167
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
RGS2.560e-17682.18domain-containing protein n=3 Tax=Ectocarpus TaxID... [more]
Uncharacterized4.350e-16863.68protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
RGS9.810e-15175.36domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Similar3.130e-14174.52to regulator of G-protein signaling 16 n=1 Tax=Ect... [more]
Similar1.790e-12364.36to regulator of G-protein signaling 16 n=1 Tax=Ect... [more]
Uncharacterized3.010e-9357.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
RGS4.510e-9355.84domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Signal1.660e-9154.91transducer, putative n=1 Tax=Ectocarpus siliculosu... [more]
Uncharacterized7.220e-8495.16protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
RGS8.190e-8476.05domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7597contigE_fasciculatus_S2_contig7597:4516..7417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score417.5
Seed ortholog evalue4.7e-114
Seed eggNOG ortholog2880.D7FU04
Preferred nameRGS1
Model size825
KEGG koko:K16449
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701
Exons6
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2CNEE@1,2QVMV@2759
Cds size825
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7597.15762.1prot_E_fasciculatus_S2_contig7597.15762.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7597 4516..7417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842420.9518602-CDS-E_fasciculatus_S2_contig7597:4515..46801696842420.9518602-CDS-E_fasciculatus_S2_contig7597:4515..4680Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7597 4516..4680 +
1696842420.9677074-CDS-E_fasciculatus_S2_contig7597:5138..52341696842420.9677074-CDS-E_fasciculatus_S2_contig7597:5138..5234Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7597 5139..5234 +
1696842420.9777265-CDS-E_fasciculatus_S2_contig7597:5689..57991696842420.9777265-CDS-E_fasciculatus_S2_contig7597:5689..5799Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7597 5690..5799 +
1696842420.9896622-CDS-E_fasciculatus_S2_contig7597:6198..63721696842420.9896622-CDS-E_fasciculatus_S2_contig7597:6198..6372Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7597 6199..6372 +
1696842421.0014515-CDS-E_fasciculatus_S2_contig7597:6657..68241696842421.0014515-CDS-E_fasciculatus_S2_contig7597:6657..6824Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7597 6658..6824 +
1696842421.011967-CDS-E_fasciculatus_S2_contig7597:7304..74171696842421.011967-CDS-E_fasciculatus_S2_contig7597:7304..7417Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7597 7305..7417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7597.15762.1

>prot_E_fasciculatus_S2_contig7597.15762.1 ID=prot_E_fasciculatus_S2_contig7597.15762.1|Name=mRNA_E_fasciculatus_S2_contig7597.15762.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=275bp
MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVD
IVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMF
AFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVF
DETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYE
TMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGS
IGEPVVKKWTADEEYLLSFTKGFSD
back to top

mRNA from alignment at E_fasciculatus_S2_contig7597:4516..7417+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7597.15762.1 ID=mRNA_E_fasciculatus_S2_contig7597.15762.1|Name=mRNA_E_fasciculatus_S2_contig7597.15762.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2902bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7597:4516..7417+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGGACGAAGAAGTCTGGGAGCCCTTGACCATGGTGGACTACATCAT
GCTAGGATTCGTCGGGACCGTCCAAGCTTTTGCCCTGGGCGTCTGCGTCC
ACCTGTTTAGCTGGCGGAATTGGCCGCCGTACGTTACCAAGAACGTCGAC
ATCGTCATCGTCATGGTGGGTGGGCAGTAGGCGAAAACGGGACACACGTT
GGTGCCTGACAATTGTTGGTTTTGTTGGTTGCTCGCTTCGCCACTCGCCC
ATGTGTAGGTAGTGCTTCGTTCGCGATCTTCGGAACGGCTGGGTCCACGT
TGGCTGTGATGGTCCAAGGTTGAGTCCTTCGTTGTCGCCCACTGCCACGC
GGTGATGCAGAAAACGACGACATCCGCCGCACATGGTGCTCGTGGTTATT
GCAAGCTGGTGGTACGGTAGAGTTCTCCAAGGGAGTTTCGTGCATATTCT
CTATCTCCCCCCCCTATCTCCCTTTACATCTCTCTGCGTCTATGTCTCGG
CCCCTTTGTGCTTCTCCCTCGGCCTCCTTCGACCTACCCCCCTCGGCTCT
CGCCGTTTCCGTCTCTTGCGCTTTCTGTGCTTCTCCCGCCCCGTCCTCGA
TCCCACCGGCTGCATTCCTCCAGACGTTCGCTGGGTTCGCGTGGACAATT
GCGGGCGCTCTGGAGAACGGTCTAATCCGGAGGAGCGAAGGCGACATTCT
TGCCAAGTGCTACCTCGAGGTGAGCGCCTATCTCTCGGGGGATCACCAAA
GAGCCATGCAGCGGGAGACACAAGCCCTGTGCGGCATTCCTCCTGTGTTT
CGCCAGCGGACATGCCGCGAATAAACGAACGAAAAGTCGGACGCCCGCTA
TTGACAGGACGGCTTACGCCTCACATATAAATGATGGCGTTGTTTTGTGC
CTGGAGCCAGGCACATCGCGGGTGGAGTTACTTTGTTCTTTGGCGACTGC
ATGGTTCACGATTCGAGGCATTTGACGATTCAAGGCAAGCTAGCCGCGTG
TTGATGGTTGCGTCCACGCTTGGTGTCCCGATGGTGATTTCACGAACCGG
TGGTTTGGTCGGCCGACCCCCTCGGAGCGTTTGTTATTCTGGTTCTCGTT
CGTTCACCCTTGTTTCTCGCTTCTTTCTGCAACCGCCCCTCCTGCCCTGC
CACCCGCTTCGTTTGATGCCCCAGAGATTCCTGGCGTGGTCGGCGCTTTG
CACACACATGTTTGCGTTTTTTATCCGGGTGTACCGCATGTGGAGAATTT
TGATCAAGCACGACGAGAATATGTGGCCAGCAAAGTGAGATCCGGCGTGT
TGCTCGTTGCGGCATTGCTAGGGTATTTATACAGCGGATGAAGTAGGAGG
GCTTCGAGTCTCATCTTCGATGCCTTGGAGCAGGGGTGCTGACTTTTGTG
GAACTTGTATCTTCTTAGCAAAGCAAGGTGTCACACACCCTGATGGCCGA
TTTAGAAAGACAGGTGGGAGTTAGGATTGTTGTGGTACGTTGGAGACGAA
AGTATGCTAGGCCACCGCCGGCCCGAAACGTTTGGAGAATGTGGCATCTA
GCTTGCACAGAGTAGAGGAACGTGGACGAATGGGGCCGCAGATTTCTCTA
AGAGCTGCTATGCTCGTCGCGTTCATACTGAGACAAGCTTGACGCCGCCC
TGCCTCGACCGTATTGATAACTCCTCTTTTCAGGTACCAGATCATGCTGC
TGTCGAGCATCAGCCTGGTTCCACCGCTGGTGGCCCTGCTTGTTCCGGGT
GCCTACGTCTTCGACGAGACTGTCAACTCGTGCAACACCACAAGCACTTC
GAGGACCGTGGTGTTGGCGATGAACGTAGTGGGGTTCTACACCATGTGCT
ATCTTTGGTGAGCTGAGGGGAGGAGGGGGGAGGGTTGATATGGACGTCGG
TGGTTCGACTTGGTGAGGTATTTGTCGTCGTCGTTGTTGTTGTTGTTGTT
GTTGTCACTGTTACTGTTGTTGCTGTTGTTGTTGTTGTCACTGTTATTGT
TGTTGTTGTGGTTGTGTTACTGTGGTTGTTGTTTGGTTTTTGGTGGTGAT
GTCGGTGGTGGCAGCAATCTTCCTCTGCACGTTCCTGCAACAGGCCTCAT
GTGTCCCGTGTGCCCTCTGGTGTCTCTTGCCGCTACAATCAGGTTTGTTT
GCACCCGTCAGCTGAGATGGGTCCGAAAGCAGTTCAACGAGTACGAGACG
ATGAAATGGACCCTGTCATGCCTGACTTTGCTCCTGTTCAGCTATGCGGT
CGTGGTGGTCGTTATCCTGGACAACCAACATGTATACGTTAGAAGAGTGG
CCATAGTTTGTGAGTCGCAGCACCGGTTCAAGATTATCTTGGAGTTGTTG
TTGGACAGGCAGGCAGAGTCGTTGGCGTTGTCCCTGCTATTGTTGTTGTT
GTTGTTGTTGTTGTCATATGATTGGCCATTTATACATCATCGTGCACCCA
GCGTGAGGGGTTGTTCTAGGGAGCGTGGGATGTTGGAGGCAGCGATTTCC
CTGTAAAAGGTTTCATTTTTTTAAGTATTTCTGGAGAAGGTCGCCCCACG
TCTGTGGGGGGCGGACTTCATAAATTGTGTTTGGCCGATGGCGTGCTGAG
GAGGAAGCCGCCGGAGACCGTGTGCACGCACGTTTGAAGCCCTTGAAATG
TTTCCCCTGTGTTGCGATGAGAACAGAAGGGCGGTTCGTCTCGGCAGTAA
AAAGAACAGGAGAAAAAAAGCCTCGCTACCGCCACACCTCATGCGGGCCT
TTATTCCTCCTCCCACGCCAACATCCCGTTACCGTGCAGACCCCGCGCTA
ACGACGCACGCGGTGTTGTGGGGTTCCATCGGGGAGCCCGTGGTGAAGAA
ATGGACGGCAGACGAGGAGTACCTCTTGTCGTTCACCAAGGGCTTCTCGG
AT
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7597:4516..7417+

>mRNA_E_fasciculatus_S2_contig7597.15762.1 ID=mRNA_E_fasciculatus_S2_contig7597.15762.1|Name=mRNA_E_fasciculatus_S2_contig7597.15762.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=825bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7597:4516..7417+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGGACGAAGAAGTCTGGGAGCCCTTGACCATGGTGGACTACATCAT
GCTAGGATTCGTCGGGACCGTCCAAGCTTTTGCCCTGGGCGTCTGCGTCC
ACCTGTTTAGCTGGCGGAATTGGCCGCCGTACGTTACCAAGAACGTCGAC
ATCGTCATCGTCATGACGTTCGCTGGGTTCGCGTGGACAATTGCGGGCGC
TCTGGAGAACGGTCTAATCCGGAGGAGCGAAGGCGACATTCTTGCCAAGT
GCTACCTCGAGAGATTCCTGGCGTGGTCGGCGCTTTGCACACACATGTTT
GCGTTTTTTATCCGGGTGTACCGCATGTGGAGAATTTTGATCAAGCACGA
CGAGAATATGTGGCCAGCAAAGTACCAGATCATGCTGCTGTCGAGCATCA
GCCTGGTTCCACCGCTGGTGGCCCTGCTTGTTCCGGGTGCCTACGTCTTC
GACGAGACTGTCAACTCGTGCAACACCACAAGCACTTCGAGGACCGTGGT
GTTGGCGATGAACGTAGTGGGGTTCTACACCATGTGCTATCTTTGGTTTG
TTTGCACCCGTCAGCTGAGATGGGTCCGAAAGCAGTTCAACGAGTACGAG
ACGATGAAATGGACCCTGTCATGCCTGACTTTGCTCCTGTTCAGCTATGC
GGTCGTGGTGGTCGTTATCCTGGACAACCAACATGTATACGTTAGAAGAG
TGGCCATAGTTTACCCCGCGCTAACGACGCACGCGGTGTTGTGGGGTTCC
ATCGGGGAGCCCGTGGTGAAGAAATGGACGGCAGACGAGGAGTACCTCTT
GTCGTTCACCAAGGGCTTCTCGGAT
back to top