mRNA_E_fasciculatus_S2_contig7597.15762.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE) HSP 1 Score: 503 bits (1294), Expect = 2.560e-176 Identity = 249/303 (82.18%), Postives = 257/303 (84.82%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLW----------------------------FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHL SWR+WPPYVTKNVDIVIVMTF GF WTI+ AL+NGL RRSEGDILAKCYLER LAW ALCTHMFAFFIRVYRMWRIL+KHDENMWPAKYQIMLLSSISL P LVALLVPGAYVFDETVN C TTSTSRTV LAMN VGFYT+CY+W FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVV+LD QHV VRRVAIVYPALTTH VLWGSIGEPV+KKWT DEEYL SFTKGFSD
Sbjct: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVMTFGGFGWTISVALDNGLFRRSEGDILAKCYLERLLAWPALCTHMFAFFIRVYRMWRILVKHDENMWPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSD 303
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 4.350e-168 Identity = 256/402 (63.68%), Postives = 268/402 (66.67%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVM-----------------------------------------------------------------------------------------------------TFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAK--------------------------YQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
MSD+EVWEPL MVDYIMLGFVGTVQ FALGVC+HL SWR+WPPYVTKNVDIVIVM TFAGFAWTIAGALENGLIRRSEGD+LAKCYLERFLAWSALCTH+FAFFIRVYRMWRIL+KHD++MWPAK YQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSR VVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSY VVVVV+LDNQHVYVRRVAIVYPALTTHAVLWGSIGEPV+KKWT D+EYL SFTKGFS+
Sbjct: 1 MSDKEVWEPLAMVDYIMLGFVGTVQTFALGVCIHLLSWRHWPPYVTKNVDIVIVMVGGQRSVDILGKAVTVLKGRTADSHSFGRQTAHKVEKVNICPKKGRSRFVCHKQRSYIPFRLLLGPFAPFPLPSSNPPRLPPPLALFVLLPSSIPLAAFLQTFAGFAWTIAGALENGLIRRSEGDLLAKCYLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKFLSVTFALDKVDLSRSTSPVLTTPVRYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYVVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSE 402
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 9.810e-151 Identity = 208/276 (75.36%), Postives = 236/276 (85.51%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQH-VYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
MSDEE+WEPLTMVDY+MLG VGT QA ALGVCVHLF WRNWPPYVTKNVDIVI+MTFAGFAWT A AL+ G + RS+GD+LA+C LE+ L WS LC HMFAFFIRVY MWRI+++HDE++ K QI LLSSISLVPPL+ALLVPGAYVFDET+NSCNTTSTSRTV L MN VGFYT+C+LWFVC RQLR VRKQFNEYE +KWTLSCL LL+ SY V V +ILDN+H V RR+AIVYP LTTH +LWGSIGEP++KKW D EYL SFT+GFS+
Sbjct: 1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIMTFAGFAWTFANALDVGFVHRSKGDLLAECSLEKLLTWSTLCIHMFAFFIRVYLMWRIMVRHDEDVGSPKGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSE 276
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Similar (to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 3.130e-141 Identity = 193/259 (74.52%), Postives = 222/259 (85.71%), Query Frame = 1
Query: 49 MLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
MLG VGT QAFALGVC+HL WR WPPYVTKNVDIVI+MT AGFAWT A AL++GLI R+EGD LA CY++ L+WS L H+ +F +RVYRMWRILIKHD++MWPAKYQ+M++SSISL P L A+LVP + FDETVNSCNTT+ SR VVLAMN +GFY +CYLWFVCTRQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV +IL+NQHV VRRVAIVYP L+T+ +LWGS+GEPVVKK+T DE YL SFTKGFS+
Sbjct: 1 MLGMVGTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALQSGLIPRNEGDFLAICYIDTTLSWSTLAVHIMSFAVRVYRMWRILIKHDDSMWPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYPVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSE 259
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Similar (to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI) HSP 1 Score: 369 bits (946), Expect = 1.790e-123 Identity = 177/275 (64.36%), Postives = 196/275 (71.27%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
MSDEE WEPLT VDY+MLG VG QAFALGVC+HL WR WPPYVTKNVDIVI+MT AGFAWT A ALE G+I RSEGD LA CY E +WS L HM +F +RVYRMWRILIKHD++MWPAK VVLAMN +GFY +CYLWFVC RQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV ++L+NQHVYVRRVAIVYP LTT+ +LWGSIGEP+ +K D EYL SFTKGFS+
Sbjct: 1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALETGIIERSEGDFLANCYFEVIFSWSTLLAHMMSFAVRVYRMWRILIKHDDHMWPAK----------------------------------------NVVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSE 235
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR8_ECTSI) HSP 1 Score: 284 bits (726), Expect = 3.010e-93 Identity = 135/235 (57.45%), Postives = 169/235 (71.91%), Query Frame = 1
Query: 4 SDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAI 708
++ EVWEPL+ D+ +LGFV T QA AL VC HL WR WPPYVTKNVD+VI+ TF+G W ++ + +G IRR GDILA C ERFL+WS LC H +FFIRVYR WRILIKHD+ MW +QI+ +SS+SL+P + VP FDE N+C+TT+ S VVL M+ +GF +CYLWFVC RQL+WVRKQFNEYETMK TL +T+ L SY V+VV +L + V RRV+I
Sbjct: 3 AEGEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLRWRKWPPYVTKNVDVVIISTFSGVLWNVSMIISSGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRTWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTVTLASYGVIVVYLLADDLVLGRRVSI 237
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE) HSP 1 Score: 305 bits (780), Expect = 4.510e-93 Identity = 153/274 (55.84%), Postives = 189/274 (68.98%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFS 822
M+++EVWEPL+ D+ +LGFV T Q AL VC HL WR WPPYVTKNVD+VI+ A L R GDILA C ERFL+WS LC H AFFIRVYRMWRILIKHD+ MW +QI+ +SS+SL+P + VP FDE N+C+TT+ S VVL M+ +GF +CYLWFVC RQL+WVRKQFNEYETMK TL +T+ L SY V+VV +L + V RRV++ YP LTT+ +LWGSI EP + K D+EYL S+TKGF+
Sbjct: 1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVIIS---------AARLPTRQPGR-PGDILAACDFERFLSWSTLCVHTVAFFIRVYRMWRILIKHDDQMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYPLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFA 264
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Signal (transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.660e-91 Identity = 151/275 (54.91%), Postives = 178/275 (64.73%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
M D+E WEPL VDY+MLG V T QAFALGVC+HL WR WPPYVTKNVDIVI+MTFAGFAWT A A+ +GLI+RSE D LA CY E A A T +F + Q++LLSS L+P L+A+L P + FDET NSC T++ + VVL M+ GF + LW VC RQLRWVRKQFNEYE MKWTLSCLT+LLFSYA+VV +ILD H YVRRVAI + EP K T + EYL SFT+GFS+
Sbjct: 1 MPDKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAVGHGLIQRSEDDFLANCYFESTDAVPACPTRLF-----------------------RVQVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAW--------------EPFKMKLTGNAEYLYSFTQGFSE 238
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU03_ECTSI) HSP 1 Score: 256 bits (653), Expect = 7.220e-84 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1
Query: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRSEGDILAKCYLERFLAWSALCTHMFAFFIRVYRMWRILIKHDENMWPAK 372
MSDEEVWEPLTMVDY MLGFVGTVQAFALGVCVHL WRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRR+EGDILAKC LERFLAWSALCTHMFAFFIRVYRMWRIL+KHDENMWPAK
Sbjct: 1 MSDEEVWEPLTMVDYTMLGFVGTVQAFALGVCVHLLIWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHMFAFFIRVYRMWRILVKHDENMWPAK 124
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE) HSP 1 Score: 266 bits (679), Expect = 8.190e-84 Identity = 127/167 (76.05%), Postives = 145/167 (86.83%), Query Frame = 1
Query: 325 MWRILIKHDENMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRTVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVILDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVVKKWTADEEYLLSFTKGFSD 825
MWRILIKHD++MWPAKYQ++L+SSISL P L A+LVP + FDETVNSCNTT+ SR VVLAMN +GFY +CYLWFVC RQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV +IL+N+HVYVRRVAIVYP LTT+ +LWGSIGEP+ +K D EYL SFTKGFS+
Sbjct: 1 MWRILIKHDDHMWPAKYQVLLMSSISLGPLLAAILVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYVICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNRHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLGGDTEYLNSFTKGFSE 167 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7597.15762.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7597.15762.1 >prot_E_fasciculatus_S2_contig7597.15762.1 ID=prot_E_fasciculatus_S2_contig7597.15762.1|Name=mRNA_E_fasciculatus_S2_contig7597.15762.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=275bp MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLFSWRNWPPYVTKNVDback to top mRNA from alignment at E_fasciculatus_S2_contig7597:4516..7417+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7597.15762.1 ID=mRNA_E_fasciculatus_S2_contig7597.15762.1|Name=mRNA_E_fasciculatus_S2_contig7597.15762.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2902bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7597:4516..7417+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7597:4516..7417+ >mRNA_E_fasciculatus_S2_contig7597.15762.1 ID=mRNA_E_fasciculatus_S2_contig7597.15762.1|Name=mRNA_E_fasciculatus_S2_contig7597.15762.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=825bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7597:4516..7417+ (Ectocarpus fasciculatus EfasUO2)back to top |