mRNA_E_fasciculatus_S2_contig7586.15746.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Haloacid (dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI) HSP 1 Score: 276 bits (706), Expect = 1.590e-91 Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRL+DEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLER+QIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGL+AAKAAGMNCLV K T
Sbjct: 114 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYT 258
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.290e-58 Identity = 96/145 (66.21%), Postives = 112/145 (77.24%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
+VGWP ++ + R LVK LHL KT LFN+ + +G IPLR GV+R++DEAI VPL VCSTSNDKAVTNLV TLMG ER +IQIFAGD+VEKKKP+PD+Y LAK+TMGLD +VIEDSHIGL AAK AGMNCLV K T
Sbjct: 111 KVGWPAEYESDESRRELVKSLHLRKTDLFNEMICEGIIPLRPGVLRVVDEAISAGVPLGVCSTSNDKAVTNLVLTLMGPERRSKIQIFAGDVVEKKKPSPDVYLLAKETMGLDAGSTMVIEDSHIGLQAAKGAGMNCLVTKSSYT 255
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: HAD-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA) HSP 1 Score: 184 bits (468), Expect = 8.490e-56 Identity = 91/145 (62.76%), Postives = 113/145 (77.93%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
+VGWP ++ LV+ELHLLKT LFN+A+V G+IPLR GV+RL+DEAI ++VPLAVCSTSN++AV+NLV TLMG+ER ER +IFAGD+V KKP PDIY+LA + + L P RV+V+EDS IGL AAK AGM CLV K T
Sbjct: 90 KVGWPLGITEKADKQALVQELHLLKTDLFNEAIVAGKIPLRPGVLRLVDEAIEQEVPLAVCSTSNERAVSNLVLTLMGRERYERFRIFAGDVVRAKKPQPDIYNLAAEALRLSPERVIVVEDSGIGLRAAKGAGMPCLVTKSSYT 234
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGM7_VITBC) HSP 1 Score: 181 bits (460), Expect = 3.650e-54 Identity = 90/145 (62.07%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
E GWPD +T +E++ LVKELHL KTA+FN + G++PLR GV R++DEAI PLAVCSTS+DKAVTNLV L+G +R R +IFAGDIV KKKP+PDIY LA M LDP++ +VIEDS IGL AAKAAGM C+V K T
Sbjct: 130 EGGWPDGYRTPEEQAALVKELHLRKTAIFNDLINQGQVPLRPGVARIVDEAIAAGCPLAVCSTSSDKAVTNLVNVLLGPQRAPRFRIFAGDIVAKKKPSPDIYLLAAQQMNLDPSKCLVIEDSGIGLKAAKAAGMRCVVTKSSYT 274
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D896_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.220e-53 Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
+VGWP + +R LV+ELH+LKT LF + +G++PLR GV+R++D AI VPL VCSTSNDKAV LV+ LMG+ER+ QIFAGD+V KKKP PDIY LAK+ MGLD R VVIEDSHIGL+AAKAAGM CLV K T
Sbjct: 40 KVGWPLGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLVRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDAGRTVVIEDSHIGLTAAKAAGMKCLVTKSSYT 184
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWZ9_AURAN) HSP 1 Score: 179 bits (453), Expect = 1.520e-53 Identity = 87/139 (62.59%), Postives = 107/139 (76.98%), Query Frame = 1
Query: 7 GWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRK 423
GWP D+R LVKELHL KTA+FN+ + G IPLR GV+RLIDEA+ VP+ VCSTS+++AV NLV+ LMG+ER + +QIFAGD+V KKP PD+Y LA TMGL+PAR VVIEDS IGL+AAKAAGM C++ K
Sbjct: 102 GWPAGYAGGDDRRALVKELHLRKTAIFNELIEAGSIPLRAGVLRLIDEALADGVPVGVCSTSSEQAVRNLVRVLMGRERYDALQIFAGDVVANKKPAPDVYLLAATTMGLEPARCVVIEDSSIGLAAAKAAGMKCIITK 240
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Protein (cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.780e-53 Identity = 89/145 (61.38%), Postives = 108/145 (74.48%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
+VGWP + +R LV+ELH+LKT LF + +G++PLR GV+R++D AI VPL VCSTSNDKAV L++ LMG+ER+ QIFAGD+V KKKP PDIY LAK+ MGLD R VVIEDSHIGL+AAKAAGM CLV K T
Sbjct: 111 KVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYT 255
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.320e-52 Identity = 89/147 (60.54%), Postives = 107/147 (72.79%), Query Frame = 1
Query: 1 EVGWPDCAKTADERS--VLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
EVGWP D+ S LVKELHL KT FN+ + G IPLR GV+RL+DEAI V LAVCSTSN+KAV NLV TLMG+ER + Q F GD+V+KKKP PD+Y +AKD+MGLD ++ ++IEDS IGL AAKA+GM CLV K T
Sbjct: 108 EVGWPSSVSLHDDESKATLVKELHLAKTDEFNKMIKSGAIPLREGVLRLVDEAISNNVSLAVCSTSNEKAVKNLVLTLMGEERYSKFQFFCGDMVKKKKPAPDVYLMAKDSMGLDASKTIIIEDSGIGLQAAKASGMKCLVTKSSYT 254
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJB9_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.430e-52 Identity = 84/141 (59.57%), Postives = 111/141 (78.72%), Query Frame = 1
Query: 1 EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRK 423
EVGWP + A+ + LVKELHL KTA+FN+ + GEIP+R GV+ LIDEA+ VP+ VCSTS+++AV+NLV+ LMG R ++I I+AGD+V+KKKP+PD+Y LA + MGL+PA+ VVIEDS IGL+A KAAGMN +V K
Sbjct: 111 EVGWPAGYEDAESQQALVKELHLRKTAIFNEMITKGEIPIRKGVLNLIDEALADGVPVGVCSTSSEQAVSNLVRVLMGDARADKIPIYAGDVVKKKKPSPDVYLLAAEKMGLEPAKCVVIEDSSIGLAAGKAAGMNVIVTK 251
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q9B2_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.340e-51 Identity = 88/146 (60.27%), Postives = 109/146 (74.66%), Query Frame = 1
Query: 1 EVGWPDCA-KTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLSAAKAAGMNCLVRKKYRT 435
EVGWP ++ DER+ VK+LHL KT +F + +G IPLR GV+RL+DEAI V LAVCSTSNDKAV+NLV TLMG ER + QIFAGD+V+ KKP PD+Y++A D M LD +R V++ED+HIGLSAAKAAG+ C V K T
Sbjct: 102 EVGWPSVMPESPDERAAQVKKLHLEKTDIFMDLIDEGVIPLRPGVLRLVDEAIEAGVRLAVCSTSNDKAVSNLVSTLMGPERAAKFQIFAGDMVKAKKPAPDVYNMAVDEMKLDKSRCVIVEDTHIGLSAAKAAGIKCCVTKSSYT 247 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7586.15746.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7586.15746.1 >prot_E_fasciculatus_S2_contig7586.15746.1 ID=prot_E_fasciculatus_S2_contig7586.15746.1|Name=mRNA_E_fasciculatus_S2_contig7586.15746.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=145bp EVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEback to top mRNA from alignment at E_fasciculatus_S2_contig7586:5508..6872- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7586.15746.1 ID=mRNA_E_fasciculatus_S2_contig7586.15746.1|Name=mRNA_E_fasciculatus_S2_contig7586.15746.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1365bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7586:5508..6872- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7586:5508..6872- >mRNA_E_fasciculatus_S2_contig7586.15746.1 ID=mRNA_E_fasciculatus_S2_contig7586.15746.1|Name=mRNA_E_fasciculatus_S2_contig7586.15746.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=435bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7586:5508..6872- (Ectocarpus fasciculatus EfasUO2)back to top |