mRNA_E_fasciculatus_S2_contig7569.15729.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK8_ECTSI) HSP 1 Score: 513 bits (1321), Expect = 7.720e-184 Identity = 236/249 (94.78%), Postives = 240/249 (96.39%), Query Frame = 1
Query: 1 LMSGGGGAITTGGRRELTWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGAPQ 747
+MSGG GAITT GRRE+TWSNP GDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAER PEVGFTREVGASIEDESLPEWG EILACFMDCETNPFTGKPFFNEVVF HRPTKTLITSDLYWNYPRKEVP GTRVWKWGMDKVYLPF+K+FMVTDGEAF SKVNQILDWGVETIVPCHGGIVR GAPQ
Sbjct: 1 MMSGGSGAITTAGRREMTWSNPMGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERQPEVGFTREVGASIEDESLPEWGDEILACFMDCETNPFTGKPFFNEVVFFHRPTKTLITSDLYWNYPRKEVPLGTRVWKWGMDKVYLPFYKKFMVTDGEAFVSKVNQILDWGVETIVPCHGGIVRSGAPQ 249
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8N9_9EUGL) HSP 1 Score: 312 bits (799), Expect = 9.150e-100 Identity = 134/232 (57.76%), Postives = 177/232 (76.29%), Query Frame = 1
Query: 55 WSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPE-WGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGAPQ 747
WSNP + + +V D+W AERPF+WN IDVGG+MAVV+L+DGSLWVHSPV+LD PLK ALA+LGPV +I+SPNYEHVKYA+QW++AYP A++Y CPG E+ P++ F EVG ++PE W ++L +MDCE NPFT PFFNEVVF+H PTKTLI +DL+WNYP + P GTR WKWGMD+VYLPF+K+FM+ D F + V++I+ W ++++PCHG + G +
Sbjct: 176 WSNPGKEVLKKVAPDLWVAERPFIWNSIDVGGKMAVVRLADGSLWVHSPVELDAPLKAALAALGPVKYIMSPNYEHVKYAQQWIDAYPDAIAYGCPGAKEKFPQISFQAEVGVG---NAVPEAWASDLLVTYMDCEHNPFTRSPFFNEVVFVHLPTKTLIVTDLFWNYPI-DAPAGTRAWKWGMDEVYLPFYKQFMICDRSRFKTAVDRIVAWDFDSVLPCHGTYIAQGGKE 403
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMY2_KLENI) HSP 1 Score: 299 bits (766), Expect = 2.330e-98 Identity = 133/236 (56.36%), Postives = 169/236 (71.61%), Query Frame = 1
Query: 46 ELTWSNPTGDDMVQVL-GDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGAPQV 750
+ TWSNP+G+ + +V+ G VW AERPF+WNGIDVGG+M VV+L DGS+WVHSPV LD LK A+ LGPV HIV+PNYEH +A+QW+EAYP A +YACPGL + P+V + E+GA+ + EWGGE F DCE NPFT KPFFNEVV++H P+ L +DL+WNYP K VP GT +WK GMDKVYLPF+K FM+ + F ++ +L WG I+PCHG +V A V
Sbjct: 90 DKTWSNPSGNVLTEVVPGQVWAAERPFMWNGIDVGGKMGVVRLRDGSVWVHSPVPLDNQLKAAMDQLGPVKHIVTPNYEHAGFAQQWIEAYPDAKAYACPGLRAKKPDVRYAAEIGAN-GSATPAEWGGEFSFAFFDCEHNPFTLKPFFNEVVYVHHPSGVLFVTDLFWNYPGKAVPPGTFIWKQGMDKVYLPFYKYFMLKRKDKFEQRLKTVLSWGFSIILPCHGTVVDEKAADV 324
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQ74_9CHLO) HSP 1 Score: 289 bits (739), Expect = 4.600e-95 Identity = 136/250 (54.40%), Postives = 172/250 (68.80%), Query Frame = 1
Query: 22 AITTGGRREL------TWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQIL-DWGVETIVPCHGGIVRIGAPQV 750
A TG RR + T++N +G + Q+ +VW A+RPF+WN IDVGGRMAV+KLSDGS+WVHSPV LD+ L AL LG V HIVSPNYEH KYAKQW+E YP A SYACPGL E+ P+V +T E+G + PEW GE+ + E NPF GKPFFNEVVF +P K LITSDL+WNYP + P GT++WK+GMD+VYLPF++RFM++D + +I +W E I+PCHG V +V
Sbjct: 20 AAATGERRMISREKYSTFTNTSGKVLQQLAPNVWAADRPFIWNRIDVGGRMAVLKLSDGSIWVHSPVQLDDDLAAALGELGEVKHIVSPNYEHTKYAKQWIERYPGARSYACPGLKEKEPQVPYTTELGGGGGEP--PEWLGEVQTTCLTYERNPFNGKPFFNEVVFFFKPEKLLITSDLFWNYPN-QAPGGTKLWKFGMDRVYLPFYRRFMISDKGEYDEATRRIFKEWNFEAILPCHGDFVPSNGKEV 266
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Predicted (protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MGP7_MICPC) HSP 1 Score: 280 bits (716), Expect = 2.250e-91 Identity = 127/236 (53.81%), Postives = 160/236 (67.80%), Query Frame = 1
Query: 40 RRELTWSNPTGDDMVQVL-GDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPR-KEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGA 741
R E TWSNPTG+ + V+ G VW AERPF WN IDVGG+MAVV+L DG+LWVHSP+DLD+ + A+ +LG V H+VSPNYEHVK+A QW EAYP A Y CPG+ + P + + EVG ED + WGGE DCE NPFT PFFNEVVF H + +D++WNYP +VP GTR+WK+GMD+VYLPF++ MV D E FA ++L W + +PCHG + GA
Sbjct: 46 RYEKTWSNPTGNVLTDVVPGVVWAAERPFTWNAIDVGGKMAVVRLRDGALWVHSPIDLDDATRAAIDALGSVKHVVSPNYEHVKWAAQWKEAYPDATLYGCPGMRAKKPGIPWDAEVG---EDGAPEAWGGEFDVALFDCEVNPFTSTPFFNEVVFCHAASGVAFVTDVFWNYPGGDDVPPGTRLWKFGMDRVYLPFYRAAMVRDREKFARAREKVLSWDFDAALPCHGSFIPRGA 278
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Hypothetical (protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DC47_MICPS) HSP 1 Score: 279 bits (713), Expect = 1.360e-90 Identity = 126/247 (51.01%), Postives = 172/247 (69.64%), Query Frame = 1
Query: 46 ELTWSNPTGDDMVQVL-GDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDE-SLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEV----------PFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGAPQV 750
+ TWSNPTG + V+ G VW AERPF WN IDVGG+M VVKL DG+LWVHSPVDLD P K+A+ +LGPV H+VSPNYEHVK+A QW EAYP A + CPG+ +++P + + E+ ++ E + + E A + DCETNPFT KPFFNE VF+H+ ++ L +DL+WNYP +V P GT+ WK+GMD+VYLPF+++ MV D +AFA++ + +L + ++PCHG +V GA +V
Sbjct: 61 DKTWSNPTGQVLTPVVDGVVWAAERPFTWNTIDVGGKMGVVKLEDGALWVHSPVDLDAPTKKAVDALGPVRHVVSPNYEHVKWAAQWKEAYPDATLWGCPGMKQKYPTIPWDEEL---VDGEGNFGDARFEFTATWFDCETNPFTSKPFFNETVFVHKKSRVLFVTDLFWNYPETDVGEGEAHSVQIPLGTKAWKFGMDRVYLPFYRKAMVRDAKAFAARRDALLQTAFDKVLPCHGEVVLSGATKV 304
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Hypothetical (protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IGZ2_MICPS) HSP 1 Score: 276 bits (707), Expect = 5.210e-90 Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 1
Query: 46 ELTWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLG-PVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPR--KEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIV 729
+ WSNP+G + + VW AERPFVW GIDVGG+M VVK+ DGSLWVHSPVDLD+ L+ AL +G V H+VSPN+EHVKYA QW A+P AV + CPG+ + P + F REVG + D EW GE F DCE NPF G PFFNEVVF HRP+ ++ +DL+WNY + +P TR WK+GMD+VYLPF++ FMV D FA ++ +++ W ++++PCHG V
Sbjct: 45 DYDWSNPSGSVLTPLREKVWAAERPFVWQGIDVGGKMGVVKMRDGSLWVHSPVDLDDDLRAALTEIGGDVKHVVSPNFEHVKYAAQWKAAFPDAVLWGCPGMIDEKPLIPFDREVG--VGDACPEEWNGEFELAFFDCEVNPFVGAPFFNEVVFHHRPSGVVLVTDLFWNYGGGGQALPAATRAWKFGMDRVYLPFYRAFMVRDRARFAERIGRVMAWEFDSLLPCHGTFV 273
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F7M5_9ALVE) HSP 1 Score: 278 bits (710), Expect = 7.790e-90 Identity = 127/233 (54.51%), Postives = 158/233 (67.81%), Query Frame = 1
Query: 46 ELTWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIED-ESLP-EWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRK--EVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVR 732
+ TWSN G+ + +V +W A+RPF+WN IDVGG+MAVV+L DG+LWVHSPV D L EAL G + H+VSPN+EHVK+A W +PS+V+ CPGLAER P VGF + V E E P EW GE CF+D E NPFT +PFFNEV+F H+P+KTLI SD WNYP + VP TRVWK GMDK+Y PF++ FM+ D F +I WGVE I+PCHG +V
Sbjct: 82 QKTWSNQKGEVLCRVTDSIWYADRPFIWNKIDVGGKMAVVRLRDGTLWVHSPVAFDRTLAEALGKAGRIKHLVSPNFEHVKFAGDWKREFPSSVASGCPGLAEREPGVGFDQTVPVVGEGGEGAPSEWLGEFEVCFLDFEHNPFTRRPFFNEVIFFHKPSKTLIVSDALWNYPGQPERVPLLTRVWKLGMDKLYFPFYENFMIKDEAGFERARRKIFSWGVERIIPCHGDVVE 314
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812Q2U2_9DINO) HSP 1 Score: 277 bits (708), Expect = 9.400e-90 Identity = 124/233 (53.22%), Postives = 164/233 (70.39%), Query Frame = 1
Query: 52 TWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLP-EWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGAPQ 747
TWSNPTG + + D+W AERPF+WN IDVGG+MAVV+L DG LWVHSPVDLDE L++ L LGPV HIVSPN+EHVK+A QW A+P A + PG+ ++ P++ F E+ + D S P EWGG +L CF DCE P G PFFNEV+F H P+ TL+ +D++WNYP +P G+ +WK+ MDK+YLPF+KRFMVT + + ++ + +W E ++PCHG V GA Q
Sbjct: 80 TWSNPTGSVLTALNTDLWVAERPFIWNSIDVGGKMAVVRLPDGGLWVHSPVDLDEELRKGLEQLGPVRHIVSPNFEHVKWAAQWKGAFPDATLWGTPGMKDKFPKIPFDVELPS---DSSAPAEWGGALLMCFADCERTPLLGTPFFNEVIFYHVPSDTLMCTDIFWNYP-SGLPSGSALWKFLMDKIYLPFYKRFMVTSPGSLNAVLDAVAEWKPEKLLPCHGRYVPSGAWQ 308
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG26_9STRA) HSP 1 Score: 273 bits (698), Expect = 5.860e-89 Identity = 119/233 (51.07%), Postives = 163/233 (69.96%), Query Frame = 1
Query: 43 RELTWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYAKQWVEAYPSAVSYACPGLAERHPEVGFTREVGASIEDESLPEWGGEILACFMDCETNPFTGKPFFNEVVFLHRPTKTLITSDLYWNYPRKEVPFGTRVWKWGMDKVYLPFFKRFMVTDGEAFASKVNQILDWGVETIVPCHGGIVRIGA 741
R+ TWSNP G D+ + +VW AERPF+WN IDVGGRM V+KL DGSLWVHSPV+LD L++ LA LGPV H+VSPNYEHVKYA+QW+ AYP A ++ACPGL ++ P++G+ R +G + + + +W EI +++CE P + FF+EVVF H P++ L+ +D+YWNYPR P T++WK+GMD VYLP ++ +V D F + +I W T+VPCHG +V A
Sbjct: 20 RDKTWSNPKGLDLTPIKHNVWGAERPFIWNTIDVGGRMTVIKLEDGSLWVHSPVELDPALQQTLAELGPVRHVVSPNYEHVKYAQQWIHAYPDATAWACPGLKDKKPDIGYDRTIGTTADAPA--DWPREIGFVWLNCERVPVLNQAFFSEVVFHHEPSQCLLCTDVYWNYPRSAPP-KTQLWKFGMDVVYLPIYRNLLVADAREFDKLLARIDAWNFNTVVPCHGRVVMEAA 249 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7569.15729.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7569.15729.1 >prot_E_fasciculatus_S2_contig7569.15729.1 ID=prot_E_fasciculatus_S2_contig7569.15729.1|Name=mRNA_E_fasciculatus_S2_contig7569.15729.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=253bp MSGGGGAITTGGRRELTWSNPTGDDMVQVLGDVWCAERPFVWNGIDVGGRback to top mRNA from alignment at E_fasciculatus_S2_contig7569:2787..6699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7569.15729.1 ID=mRNA_E_fasciculatus_S2_contig7569.15729.1|Name=mRNA_E_fasciculatus_S2_contig7569.15729.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3913bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7569:2787..6699+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7569:2787..6699+ >mRNA_E_fasciculatus_S2_contig7569.15729.1 ID=mRNA_E_fasciculatus_S2_contig7569.15729.1|Name=mRNA_E_fasciculatus_S2_contig7569.15729.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=759bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7569:2787..6699+ (Ectocarpus fasciculatus EfasUO2)back to top |