mRNA_E_fasciculatus_S2_contig7504.15671.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: PEPD_MOUSE (Xaa-Pro dipeptidase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L6_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.890e-97 Identity = 153/164 (93.29%), Postives = 156/164 (95.12%), Query Frame = 1
Query: 1 MPAAAQMTTSSTSXXXXXX--PPLIPLLPETIAAAATKRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENRAKVIDRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHFQ 486
MPAAAQMTTSS XXXXXX PPLIPLLPETI A A KRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENR KVI+RLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREP+CLATIDLETGKATLFIPRLPAEYATWMG+ILPPKHFQ
Sbjct: 1 MPAAAQMTTSSXXXXXXXXXXPPLIPLLPETIGATA-KRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENRGKVINRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPNCLATIDLETGKATLFIPRLPAEYATWMGDILPPKHFQ 163
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: AMP_N (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB9_9PHAE) HSP 1 Score: 289 bits (740), Expect = 3.210e-93 Identity = 155/164 (94.51%), Postives = 156/164 (95.12%), Query Frame = 1
Query: 1 MPAAAQMTTSSTSXXXXXX--PPLIPLLPETIAAAATKRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENRAKVIDRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHFQ 486
MPAAAQMTTSS XXXXXX PPLIPLLPETI AAA KRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENRAKVI+RLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPA YATWMG ILPPKHFQ
Sbjct: 1 MPAAAQMTTSSXXXXXXXXXXPPLIPLLPETIGAAA-KRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENRAKVINRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAVYATWMGEILPPKHFQ 163
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA66_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.140e-38 Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 184 VDYTMHAENRAKVIDRLRETDG--VAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHFQ 486
+D+++HA NRA V+D L+ G V + V+L++GG+A RD+TDHEP+FRQES FHYLFGVREPDC ID+ TG ATLFIPRLP YATWMG+ILPP HFQ
Sbjct: 25 IDFSLHARNRAAVVDNLKRFGGATVPEKAVILVQGGVAETRDDTDHEPLFRQESNFHYLFGVREPDCFGAIDVATGAATLFIPRLPDVYATWMGDILPPAHFQ 127
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H3N2_HEMAN) HSP 1 Score: 113 bits (283), Expect = 4.230e-29 Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 184 VDYTMHAENRAKVIDRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNI 465
V +MHA+NR +++ + + + +GV LL GG + RD++DHE +FRQES FHYLFGV EPDCL +D+ G ATLFIPRLPA+YA WMG I
Sbjct: 16 VPRSMHAQNRQRLVSLMNKQ---SCKGVALLLGGTSKTRDDSDHEEIFRQESNFHYLFGVAEPDCLGAVDVRNGAATLFIPRLPADYAMWMGPI 106
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LQA6_ALECA) HSP 1 Score: 112 bits (279), Expect = 1.140e-28 Identity = 63/125 (50.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 91 AAAATKRSKKNPRVPSEMPALELHPTVGEYPVDYT--MHAENRAKVIDRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMG 459
A AA + + P +P PA P P ++ MH NR ++ R RE A R VLL GG R +TDHE VFRQESTFHYLFGV+EPD LA I ETG+ TLF+PRLP E A WMG
Sbjct: 20 ALAAMLAAGRRPDLPGPQPAQPRAP-----PPSFSARMHRLNREALLQRFREARPAAGRAVLLFAGGPEPARHDTDHEDVFRQESTFHYLFGVQEPDYLAAISAETGETTLFMPRLPEEDAVWMG 139
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Metallopeptidase (M24 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWQ9_KLENI) HSP 1 Score: 119 bits (299), Expect = 1.210e-28 Identity = 65/133 (48.87%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 94 AAATKRSKKNPRVPSEMPALELHPTVGEYPVDYTMHAENRAKVIDRLRETDGVAPR--GVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHFQ 486
A A + KK + P P E +Y V ++HAENRAK++ L ET A + GV+LL+GG R +TDHEP+FRQES F YLFGV E +D+ TGK+ LF PRLP+EYA WMG I PP+HF+
Sbjct: 11 AKAMETDKKLIKKPVNQPRFE------KYVVPMSLHAENRAKLVKALGETLSAAGKENGVVLLQGGEQQTRYDTDHEPLFRQESYFAYLFGVTEAGFYGAVDVATGKSILFAPRLPSEYAIWMGKIQPPQHFK 137
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9U7_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.070e-28 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 142 MPALELHPTVG----EYPVDYTMHAENRAKVIDRLRETDGVAPRG-VLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHF 483
M AL+L G + + TM++ENR ++++R ++ A G VLL +GG++ R++TDHE +FRQES F +LFGV EPDC ATI++ +G+ TLF+PR P EYA WMG I PP HF
Sbjct: 13 MAALDLPGAFGVHMPPFRIPRTMYSENRQRLVERFQQDQQGAVEGAVLLFKGGVSLTRNDTDHELIFRQESFFSHLFGVLEPDCYATIEVPSGRTTLFVPRFPQEYAVWMGPIHPPSHF 131
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YSS7_9CRYP) HSP 1 Score: 118 bits (296), Expect = 3.370e-28 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 1
Query: 184 VDYTMHAENRAKVIDRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHFQ 486
V +MHA+NR +++ + D + +GV LL GG RD++DHE +FRQES FHYLFGV EPDCL ID+ G ATLFIPRLPA+YA WMG I P+ F+
Sbjct: 37 VPRSMHAQNRQRLVSLM---DRKSCKGVALLLGGTGKTRDDSDHEEIFRQESNFHYLFGVAEPDCLGAIDVRDGSATLFIPRLPADYAMWMGPIASPEDFK 134
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EV76_CHRCT) HSP 1 Score: 117 bits (294), Expect = 8.240e-28 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 172 GEYPVDYTMHAENRAKVID----RLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNI 465
G + D +H E R K + +LR + P G+++LRGG++ NRD+TDHE +FRQES FHYLFGV+EPD +++ +G++TLFIPRLPAEYA WMG+I
Sbjct: 52 GTFVADAALHREARRKAANALAAKLRTNGNIVPEGLIVLRGGVSRNRDDTDHEELFRQESYFHYLFGVKEPDWWGMVEVPSGRSTLFIPRLPAEYAVWMGHI 153
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Match: AMP_N (domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JTW8_CHABU) HSP 1 Score: 112 bits (279), Expect = 1.740e-27 Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 148 ALELHPTV-----GEYPVDYTMHAENR----AKVIDRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAEYATWMGNILPPKHFQ 486
A E P V G +PV +MHA NR K++ R++E+ G V+LL GG++ R TDHEP+FRQES F YLFGV+EP +DL TGK LF+P LP +YA WMG I P+HF+
Sbjct: 18 ATEARPGVFWMGPGTHPVPMSMHAGNRKRLVTKMLKRIQESGGSPRNSVVLLEGGVSETRYCTDHEPLFRQESYFSYLFGVKEPGFYGALDLATGKCFLFMPLLPKDYAVWMGTIHGPEHFK 139 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7504.15671.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7504.15671.1 >prot_E_fasciculatus_S2_contig7504.15671.1 ID=prot_E_fasciculatus_S2_contig7504.15671.1|Name=mRNA_E_fasciculatus_S2_contig7504.15671.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=162bp MPAAAQMTTSSTSTSPSSAPPLIPLLPETIAAAATKRSKKNPRVPSEMPAback to top mRNA from alignment at E_fasciculatus_S2_contig7504:5213..5698+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7504.15671.1 ID=mRNA_E_fasciculatus_S2_contig7504.15671.1|Name=mRNA_E_fasciculatus_S2_contig7504.15671.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=486bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7504:5213..5698+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7504:5213..5698+ >mRNA_E_fasciculatus_S2_contig7504.15671.1 ID=mRNA_E_fasciculatus_S2_contig7504.15671.1|Name=mRNA_E_fasciculatus_S2_contig7504.15671.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=486bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7504:5213..5698+ (Ectocarpus fasciculatus EfasUO2)back to top |