mRNA_E_fasciculatus_S2_contig7446.15621.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7446.15621.1
Unique NamemRNA_E_fasciculatus_S2_contig7446.15621.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Alb3 (homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 582 bits (1501), Expect = 2.780e-207
Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 1
Query:    1 MGRPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAMVDPGMMHGVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQPVDESQAASQN 936
            MGRPLTALVAACAMANAGTVSAFAPPGLAVSARSRFV ANSWTSRSSAPAARPSASGARGLQAMVDPGMMHGVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIP+ILVITQSISTRIMQP KDPSQPVDESQAASQN
Sbjct:    1 MGRPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVAANSWTSRSSAPAARPSASGARGLQAMVDPGMMHGVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQN 312          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Alb3-like (protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 293 bits (751), Expect = 7.600e-94
Identity = 172/308 (55.84%), Postives = 208/308 (67.53%), Query Frame = 1
Query:    1 MGRPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAMVDPGMMHGVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQPVDESQA 924
            M R L  +  AC +A+A      AP G+ VS     V   +  SR S PAA    SG  GL+A+ D     G+D   LHQV +G+AD    AA A+ AA            L   TE AIT LHD L   GV  +YG +II FTLF+KG+TFPLTYQQL+STTKMQTL PKVK++Q R ANNPEAAN+A+  LY+ E VNPL+GCLP+LAQIPIFISLYR+LLNLAKENKL E FLW+PSLEGP F +PPTE ++WIK W +G P LGWHDT+ Y++IP+ILVITQSIS +++ PPK      D SQA
Sbjct:    1 MARRLGLVGLAC-LASAAAFVINAPAGIVVSNGFGRVARRTVQSRGS-PAAT---SGVGGLRALAD----GGIDFTVLHQVFSGLAD--ATAATADAAADAAANNGGVFAGLVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTSQA 297          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 3.050e-75
Identity = 122/230 (53.04%), Postives = 163/230 (70.87%), Query Frame = 1
Query:  217 VDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQP 906
            +DP  L   + G+A    AA VA E A     G  P+  L   T  AITGLHD+L  +G+ + YG +II FTL +K +TFPL  +QL ST KMQ + PK++E+Q ++ANNPE ANQ + QLYQ  ++NPLAGCLP+LAQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ +   + + W+  W DGAP LGWHDT+ ++TIP+ILV++Q IS +++Q   D  QP
Sbjct:   65 MDPLVLSHAVQGLAQD--AADVASEVAKSDQGG-GPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTWQDGAPMLGWHDTLCFLTIPVILVLSQKISQKVLQ--SDAQQP 289          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Membrane (insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.510e-69
Identity = 126/265 (47.55%), Postives = 168/265 (63.40%), Query Frame = 1
Query:  175 RGLQAMVDPG----MMHGVDPA---WLHQVLTGIADGDVAAAVAEEAAXXXXXGFHP--------------IQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQP 906
            R L+A+VDPG    ++H   P+   WL Q L G+AD   AAA A + A                       +    G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K W    P LGWHDTIA++T+PLIL+++QSIS +I+QP  +   P
Sbjct:   79 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVAD--AAAATAPDTAGAVEGSKEMTGAAXXXXXXXGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDP 341          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Preprotein (translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 231 bits (588), Expect = 9.700e-69
Identity = 126/265 (47.55%), Postives = 168/265 (63.40%), Query Frame = 1
Query:  175 RGLQAMVDPG----MMHGVDPA---WLHQVLTGIADGDVAAAVAEEAAXXXXXGFHP--------------IQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPSQP 906
            R L+A+VDPG    ++H   P+   WL Q L G+AD   AAA A + A                       +    G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K W    P LGWHDTIA++T+PLIL+++QSIS +I+QP  +   P
Sbjct:   41 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVAD--AAAATAADTAGAVEGSKEMTGAAXXXXXXNGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDP 303          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.980e-68
Identity = 126/258 (48.84%), Postives = 164/258 (63.57%), Query Frame = 1
Query:  175 RGLQAMVDPGMMHGV-------DPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLT--------------GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQP 885
            R L+A+VDPG +  V         AWL Q L G+AD   AAA A +AA                            G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K W    P LGWHDTIA++T+PLIL+++QSIS +I+QP
Sbjct:  141 RTLKAVVDPGHVAEVVHTHLPSSSAWLLQTLQGVAD--AAAATAPDAAGAVEGSKEMTSXXXXXXXXXXGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFNPSLGWHDTIAFLTVPLILIVSQSISQQILQP 396          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMA5_HEMAN)

HSP 1 Score: 218 bits (555), Expect = 4.490e-65
Identity = 141/330 (42.73%), Postives = 197/330 (59.70%), Query Frame = 1
Query:   22 LVAACAMANAGTVSAF-APPG-----LAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAM-----------------VDPGMMHGVDPAWLHQVLTGIADGDVAAA------VAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPT-----FDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPK--DPSQ 903
            +V ACA+   G+ SAF APP      LA +ARS   P +      S P A     GA GL+A+                 +D  ++  VD + +H  +   AD   A A      V EEA      G   + L+ GV+   +T LH +  +  +P A+G +I+ FT+FVK IT+PL Y+Q++ST  MQ L PK+K +QARY ++P+  N+   QLY+ E VNPLAGC+PAL Q+PIFI+LYR LL LA ++KL ESFLWIPSLEGP        + P + + W+  W DGAP LGW DT+AY+++P+ILV+TQ+IS +++QPP+  DP+Q
Sbjct:   29 VVLACAV---GSTSAFTAPPSAGGLRLAPTARSTLSPRS--VRLGSLPLAPTRTLGATGLRAIAEHADAANHFAFLLSTHMDADVLSKVDMSEVHNAVMHFADAAAATAKEAANTVTEEAKKEDDGGIFGL-LVKGVSTCLVT-LHSIFKAANLPGAWGWAIMTFTIFVKAITYPLNYKQMASTISMQKLQPKLKAIQARYKDDPQKQNEMTAQLYKDEEVNPLAGCIPALVQLPIFIALYRGLLELAMQDKLQESFLWIPSLEGPVGKYNPVTNLPEDGLGWLTKWVDGAPPLGWEDTLAYLSLPVILVVTQTISQKLLQPPQSDDPAQ 351          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYJ8_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.040e-64
Identity = 120/250 (48.00%), Postives = 154/250 (61.60%), Query Frame = 1
Query:  172 ARGLQAMVDP-GMMHGVDPAWLHQVLTGIADGDV-------AAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKD 894
            AR L+ ++ P  ++  +DPAWL  V  G+AD  +       AA  A   A     GF           GAI G+H  L S+GVP AYG++II FT  VK    P+TY+Q+ S  +MQ L PK KEL+ +Y  N    NQ   +LY+   VNPLAGCLPALAQIPIFI+LYRSL+NLA  +   E FLW+PSL GP +         W+ K+W DG P LGWHDTIA++TIP+IL++TQSIS R++ PP D
Sbjct:    4 ARALRMVLQPHDVVTHLDPAWLSHVFQGVADAAMTSLDATNAAVDATTDAAAKEPGF--FDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSD 249          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.360e-64
Identity = 122/233 (52.36%), Postives = 155/233 (66.52%), Query Frame = 1
Query:  241 VLTGIAD------GDVAAA---VAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPP-KDPSQ 903
            V TG AD      G  A+A   V E AA     G+     LT   EG +  +H+ L S G+ + A+G+SII  TL +K  TFPLT  QL ST KMQ L P +KE QA+Y +NPE  NQ + ++YQT NVNPLAGC+P+L QIP+FI LYR++LNLAKEN L ESFLW+P+LEGPT+ + P     WI K+W DG P LGW DT+A++ IPLILV++Q  S +IMQP  +DP Q
Sbjct:   88 VTTGAADSAATAVGAAASASPEVMEAAADASNNGW--FGFLTLPIEGLLNIIHNTLVSTGMDANAWGVSIIVMTLVIKAATFPLTKSQLESTNKMQALQPVIKEAQAKYQSNPEVMNQKIAEIYQTNNVNPLAGCVPSLVQIPVFIGLYRAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNWVDGVPSLGWDDTLAFLAIPLILVVSQYASMQIMQPKSQDPQQ 318          
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XYI9_HEMAN)

HSP 1 Score: 218 bits (555), Expect = 1.060e-63
Identity = 141/330 (42.73%), Postives = 197/330 (59.70%), Query Frame = 1
Query:   22 LVAACAMANAGTVSAF-APPG-----LAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAM-----------------VDPGMMHGVDPAWLHQVLTGIADGDVAAA------VAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPT-----FDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPK--DPSQ 903
            +V ACA+   G+ SAF APP      LA +ARS   P +      S P A     GA GL+A+                 +D  ++  VD + +H  +   AD   A A      V EEA      G   + L+ GV+   +T LH +  +  +P A+G +I+ FT+FVK IT+PL Y+Q++ST  MQ L PK+K +QARY ++P+  N+   QLY+ E VNPLAGC+PAL Q+PIFI+LYR LL LA ++KL ESFLWIPSLEGP        + P + + W+  W DGAP LGW DT+AY+++P+ILV+TQ+IS +++QPP+  DP+Q
Sbjct:   27 VVLACAV---GSTSAFTAPPSAGGLRLAPTARSTLSPRS--VRLGSLPLAPTRTLGATGLRAIAEHADAANHFAFLLSTHMDADVLSKVDMSEVHNAVMHFADAAAATAKEAANTVTEEAKKEDDGGIFGL-LVKGVSTCLVT-LHSIFKAANLPGAWGWAIMTFTIFVKAITYPLNYKQMASTISMQKLQPKLKAIQARYKDDPQKQNEMTAQLYKDEEVNPLAGCIPALVQLPIFIALYRGLLELAMQDKLQESFLWIPSLEGPVGKYNPVTNLPEDGLGWLTKWVDGAPPLGWEDTLAYLSLPVILVVTQTISQKLLQPPQSDDPAQ 349          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7446.15621.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Alb32.780e-20799.04homolog, thylakoidal inner membrane insertase n=2 ... [more]
Alb3-like7.600e-9455.84protein, thylakoidal inner membrane insertase n=1 ... [more]
Hypothetical3.050e-7553.04protein (Fragment) n=2 Tax=Pinguiococcus pyrenoido... [more]
Membrane1.510e-6947.55insertion protein, OxaA/YidC n=1 Tax=Nannochlorops... [more]
Preprotein9.700e-6947.55translocase subunit YidC n=2 Tax=Nannochloropsis g... [more]
Uncharacterized2.980e-6848.84protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Hypothetical4.490e-6542.73protein (Fragment) n=1 Tax=Hemiselmis andersenii T... [more]
Uncharacterized5.040e-6448.00protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Hypothetical7.360e-6452.36protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Hypothetical1.060e-6342.73protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7446contigE_fasciculatus_S2_contig7446:151..5255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score588.2
Seed ortholog evalue2.3e-165
Seed eggNOG ortholog2880.D8LUC7
Preferred nameALB3.1
Model size936
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019904,GO:0022607,GO:0031976,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045038,GO:0045184,GO:0046907,GO:0050789,GO:0050793,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051291,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070206,GO:0070208,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0090150,GO:0090342
Exons8
EggNOG free text desc.membrane insertase activity
EggNOG OGsCOG0706@1,KOG1239@2759
Ec32 ortholog descriptionAlb3 homolog, thylakoidal inner membrane insertase
Ec32 orthologEc-14_004480.1
Cds size936
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7446.15621.1prot_E_fasciculatus_S2_contig7446.15621.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7446 151..5255 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842407.354446-CDS-E_fasciculatus_S2_contig7446:150..3021696842407.354446-CDS-E_fasciculatus_S2_contig7446:150..302Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 151..302 -
1696842407.3692992-CDS-E_fasciculatus_S2_contig7446:726..8511696842407.3692992-CDS-E_fasciculatus_S2_contig7446:726..851Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 727..851 -
1696842407.3792837-CDS-E_fasciculatus_S2_contig7446:1576..17221696842407.3792837-CDS-E_fasciculatus_S2_contig7446:1576..1722Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 1577..1722 -
1696842407.3892505-CDS-E_fasciculatus_S2_contig7446:2374..26371696842407.3892505-CDS-E_fasciculatus_S2_contig7446:2374..2637Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 2375..2637 -
1696842407.4001796-CDS-E_fasciculatus_S2_contig7446:3418..34991696842407.4001796-CDS-E_fasciculatus_S2_contig7446:3418..3499Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 3419..3499 -
1696842407.4196293-CDS-E_fasciculatus_S2_contig7446:4578..46531696842407.4196293-CDS-E_fasciculatus_S2_contig7446:4578..4653Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 4579..4653 -
1696842407.4344127-CDS-E_fasciculatus_S2_contig7446:4898..49501696842407.4344127-CDS-E_fasciculatus_S2_contig7446:4898..4950Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 4899..4950 -
1696842407.443722-CDS-E_fasciculatus_S2_contig7446:5213..52551696842407.443722-CDS-E_fasciculatus_S2_contig7446:5213..5255Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7446 5214..5255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7446.15621.1

>prot_E_fasciculatus_S2_contig7446.15621.1 ID=prot_E_fasciculatus_S2_contig7446.15621.1|Name=mRNA_E_fasciculatus_S2_contig7446.15621.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=312bp
MGRPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVPANSWTSRSSAPA
ARPSASGARGLQAMVDPGMMHGVDPAWLHQVLTGIADGDVAAAVAEEAAK
GGGGGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGI
TFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVN
PLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPP
TEMMSWIKDWSDGAPKLGWHDTIAYMTIPLILVITQSISTRIMQPPKDPS
QPVDESQAASQN
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mRNA from alignment at E_fasciculatus_S2_contig7446:151..5255-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7446.15621.1 ID=mRNA_E_fasciculatus_S2_contig7446.15621.1|Name=mRNA_E_fasciculatus_S2_contig7446.15621.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5105bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7446:151..5255- (Ectocarpus fasciculatus EfasUO2)
ATGGGGCGACCATTGACAGCGTTGGTCGCGGCCTGCGCCATGGTAAGTCT CGTGGCGTGCTCTCGTTTTTTGCATCTGCTGCGCATCTGCGGTCTCGGCA GCTGCTGTAGGACGTTCATGCTACATACACAACCAACTGCTCTGACGAGG TTGATCACCCCTCGTTTGCGTGCTCTCCTGTACCGATGTATTTTGGGCTT CCCTGCTTGGGTAGACCAATGAGGAGATATTTGTTAAGCCTTCGCCGCCT TCTTTTGATGGACTCGTGTCTCTGTGCTCTGCGTGCCTGCTGCTGAGGTG GGCAGGCCAACGCAGGAACGGTGTCAGCTTTTGCCCCACCTGGCCTCGCT GTATCAGGTGAGACGTGAGACCCTCGGCAGTATGGTATGCTTACGAGTCC AAGGTATTCCATTATAGCAATACGTAGCTCCTAGTCCGTGTAGAGAAATT GTGAACGGCCAGTATGACTCTGGTTCATTTGCCATGTTACCCTAGTCTCA CGAAAAGGCATCTCTTGGGTACAAGTGCAAGTCATGTTTGTTTGCCGTTG CGCGTTCAACCACGCCCCTGCGTTGCTTCACCTCCCTCCTTTTACGCCAC AGCTCGCTCCCGGTTTGTTCCTGCTAACTCGTGGACGTCGAGATCAAGCG CACCAGCAGCCCGTCCTTCGGCGTCAGGTGTGGCTAGCTAGTAATTTCTG GCATTCATTTCTCCCCCGTATCGTCGTCGTTCGGCCTCGCTATGACTCTT CTTTGTACCTGAACATCAGTCCAATGAGTAAGAGGATGCGTCCCATCTAA TGCACTGCGGTTGGCGAGCATGCGTGCGACACCGTCTAAAGTTGCGTAGG ACTGCTTGTGTCCTGGCGTGCCCTCTGTAGAGCCTTCCCTGTAGAGTATG GCGGGGGAGCGAGGGGCAGGGGTGGGCGCTCTGCACACCTGTAGTGCCAC GAGGACTCGAGGCCTTTGCCTCTTAAGGTTGTGCCCCTTGAGGTCTCCTC ATAATACAGCTTTAGCCGTAAAATCCTGACTGCAGGGAGATGAACCAAAG CCACAACAATGTAATGGTGGTTGCTCTCAGGAAGCCTGTTCAGAACCGCG GACTGCACGGTCCCTGCGCACACACACACCCGGATGCCGTACAGTAGTAC AGTGGATGGTGTCTGGCGTTTGCTGACTACCCAACGCCAACCTCGTGTGT ATATGTCCGTAACCCAGCCATGGCTACAAACCCGAATCTGACCTCGACAG CAGTCTCGTGGTCTCGTTTTTCTCTCGAGCTTAAAGCAACCATGTTGATC GACAGCAGGAGTCAGATACCAAAGGTCGCACCTACACTAAATAGTTGTGT CGCAGAGCGCGGTACGGCCCATCTCCTGAGTAGGATGTTGGCGAGCGTAA GAAGGCGGTGTTTCTTGCACCACCGCTCGGGTCATGCTCGATGTGCATTA GCTTGCGCCGCTACCGAGCACCCGTGTTCGACGCGAACTACTCATTTTAA GTGAGAAGACGGCTTAGCGAAGTGTGCAGCTTGGCGCAAAAGGTCGCCCT GCTCGTTGTAGGAGAGACGAGAGTGATCCGCCCCCGTCGAGTAACCAGCT CCCCTCCAGTCCAGTGCCCACGTCCTCACTCGAAGTCCCGTTACCTGCTC TTGCTCTGGTGCTGCGCGTGGTGCCGCGTTCGTGTTGGTCGTTCGCGAAT CGTTTTCCGTTCACGCATTTTCGCGGTGCGTCGTTGCGGCGCGTTCTCGA GGGCAGGGGCACGAGGGCTGCAGGCGATGGTGGACCCTGGGATGATGCAC GGGGTGGACCCGGCATGGTTGCACCAAGTCCTGACAGGTGTGTGTGTGTG TGTGTGTTCATTATTAGCATCGACCGCGCTAACCGGCTAACCAATGAAAA GACGTCAGTCTCAGTGCGGTGGAAAACACAAAATGCTTATATAGCCCACA ATCTGGGCCCCCGGGACAGAGGGTGTGTGTGTGCGTATGTGCGGCGACAT TTGACAGTGTGGATGTGTGGATACTGGGTCGCTCGAAGAGTGGTGTACTT GATGATCCTTGGCAGAAGCGCCGGAAACGTAAAAGCTCTCCACTGCGATA GCGTTGAAATGTCATTGTGCTCCCCACGAGGCGGAGATTAGTAGTCGTGC CGTAGGCGAACGGGCCGGGAAGGAAGGGACTAGGCGAAGGAATGTTGTCT CCCCTTGGCCAAGCATTGCTTGTGGGAGATAAATGTCGATTCCAACTGTC TGCACGTTGGTCTGTTGAGCGCATCGTAGTCGCCACCATATTTTTTTGCG CCTATAGTGTCGTTGTCTCCGCGTCTAGCCAGCACGACCAAAGCAGTCTT CCAAGCGTCATGCGAAAAAATGTTCAAGGAGAAGCAACCCGCTTGGTTTT GTCTCCGGTTCGACCTCTGTGACGGCCCTAGCCTTTTGGACTCTTTCACA ACCAACGAGTCTTCAGGCAGCCCCTCGTTATTGCTTGTTTATCTCCGATA CGACGTTCTATGACGGCCATATCACTTTCGACTCTTCTCACAACTAACGC CAGCCAACCGTAACCTGTTCTGCCGTTACTTGCGGCCCGCGTTTTATTTC CGCGCGCACGCGTGTCAGGGATCGCGGACGGCGATGTGGCGGCGGCGGTG GCCGAGGAGGCCGCCAAGGGAGGCGGCGGCGGCTTCCACCCGATCCAGCT CCTGACGGGAGTGACCGAGGGGGCCATCACTGGCCTGCACGACGTGCTTG CGAGCATGGGGGTGCCCTCCGCCTACGGCATCTCCATCATCTGCTTCACG CTCTTCGTCAAGGGCATCACCTTCCCCCTCACGTACCAGCAGCTCTCGAG CACCACCAAGATGCAGACTCTCGGGCCTAAGGTGTGTTTGTTTGTTGGTC GGCGTTGCGATGACGGGTGGGGGACAGGGGTAGGGTGAGTCGCCGTCCGC TCCCCAGCGCAGTGTTTTCGTTGCGTTGTTTGAGAGAGAATGTGAAGAAT CTCGGGCTGGAGGCGAAGAGCGAGCTTTGTGCTGTTCACCGGCTTGGTGT TGGTTGTGGGCGAGGGCGACTATGTGTAGAGACCCCTTGGCAAATTGTCA TCAGCAAATCTCCTGACTTTTGTTGGAAATCTGTGTAGCCTTCGATCGAA AAAAGGAACAAAAGCACGAACTGGCATCAGGACGGATAATGTGAAGGTGC GAGTCCACCAGGTAGAAGGCGGTGACCAGCTGCAGAAGTGAAATAGTTTT CAGTTGTTACCAATGCCAGAACGTGGTCGTCAAACAACACACCTCTCGGA TAACTCAGCCAAGCCTTGTGTACGGCAAACGAACACGAGTCTACCGGCGC TCACGCATGACCCCGGGTCGAAATGGTTCCCGGCCTGTGGCGCAGCAGTA GCCTAGAAAATACCCCCCCTGGGAAAAACCCCCCCGAGAAATTCGGGAGA CAACACGCACAAAAAAGCACACAGAGTCGGGGTTCCGCAAGAGTATCGAG TCGTTAGCACGTACCCACCTTCGAATGAAACAGGTGAAGGAGCTGCAGGC GCGATACGCCAACAACCCCGAGGCGGCCAACCAGGCGGTGCAGCAGCTGT ACCAGACGGAGAACGTCAACCCCCTGGCGGGGTGCCTGCCCGCGCTGGCG CAGATCCCTATCTTCATCTCGCTCTACAGGTGTGTGTGTGGGAGGAGATT ACACGTATTTATGTCTGGCAAAGAGCTTGTAGCTGCAAATGGTGCAGGCT TAGGGTCTTGTTTCCTTCATCTCATCTATCATCTATCATCTATCATCTCT TGTCGCGGTATGGTGCCCCGCAAGCCTTGTGGGGCTCTCTTGTATTCGGT TGTTCTGTCTACGGGCTCGAAAGAAGGACATCGTTTATTGTACGATTTGG TAGCAGGTTTGGCCGCCAAGATGGCTCGAAAGAACGTCGTGGGTTCGAAC TTCGGCGTGTCGTTGTGTAGGAAGCACGTGCCCGTGGGTTAGTCAACAAA ATCGTATTTTTCGTTGACGAGGGTGGGAGGACTGCTGACCCCTTTTCGTG ATAACATGAAAGGCAGGCTTTGCTGCTGTCAAATAGGAAAACCTTGGTGT GACCTCGGGTCTAAGACCCTCGAGAGAGACGTCAACACTGTGTGTGTGCT GTCCGCAGATAGTGTGATCGACACGGTGGTAGAGTTGGTAGTTAAACCTG TTGGGTGCAGCAACCGCCCCGGAAAATATACACTCGTCTAGCGTTGCGCG TTCGTATCCGCCCCGCCGTTTTGTCCACGTAGAGGCAGACAGACAGACCC CTAGACTCTGTACTCTGTCGTTGTGTCCGCGTTGATATCCATACATGCAA GAAGAAATTAATGCCGGAAACATGCCTATTTATTTCGCACGATTTCGCGC GAAGGTCCTTGTTGAACCTGGCCAAGGAGAACAAGCTGACGGAAAGCTTC TTGTGGATACCAAGCCTGGAAGGGCCGACGTTCGACTCCCCGCCCACCGA GATGATGAGCTGGATCAAGGATTGGTCGGGTAAGTGCTGTAGCCACAACC GAAGTGGTGCACGTGGTACACTTGGCAAATCAATCAACCACCGCCCGTCG AGAAGGCCCGGCTGTTCCGAACCAGCGGCGGCAAAGCATCATTTGTAGCT CTCGTTGTCCTTCGGTTTTGTTGCTGGCCTCGCAGTGTTTTTATTTTTAT TATTTTTGGTGTAGAGGCCAGCTCTGACACTGGGTTAGTCCAGCTTCACC TCTGCCCCCTCCCCCCCCCTCCCTCTCTTTAGCTTTTGTCCGCGAGTCCC CGTTCATGCGCCGCAGATGCCTTCACTATTTCTCTATATTCTCAGCGTGT AGTTCTTTTGGTGTCCGACCGCGCGCGCTTCGTCCCCCCAACCATTGCTG TCCTCCTCGCCGCCGTCGTGTCGTGTTTTTTTCTTGACGTCTGCCGAGGC CAGACGGGGCGCCGAAGCTGGGCTGGCACGACACCATCGCGTACATGACC ATCCCCCTCATCCTGGTCATCACACAGTCCATCTCCACGCGGATCATGCA GCCGCCCAAGGACCCCTCCCAGCCGGTCGACGAGTCGCAGGCAGCGTCGC AGAAT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7446:151..5255-

>mRNA_E_fasciculatus_S2_contig7446.15621.1 ID=mRNA_E_fasciculatus_S2_contig7446.15621.1|Name=mRNA_E_fasciculatus_S2_contig7446.15621.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=936bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7446:151..5255- (Ectocarpus fasciculatus EfasUO2)
ATGGGGCGACCATTGACAGCGTTGGTCGCGGCCTGCGCCATGGCCAACGC
AGGAACGGTGTCAGCTTTTGCCCCACCTGGCCTCGCTGTATCAGCTCGCT
CCCGGTTTGTTCCTGCTAACTCGTGGACGTCGAGATCAAGCGCACCAGCA
GCCCGTCCTTCGGCGTCAGGGGCACGAGGGCTGCAGGCGATGGTGGACCC
TGGGATGATGCACGGGGTGGACCCGGCATGGTTGCACCAAGTCCTGACAG
GGATCGCGGACGGCGATGTGGCGGCGGCGGTGGCCGAGGAGGCCGCCAAG
GGAGGCGGCGGCGGCTTCCACCCGATCCAGCTCCTGACGGGAGTGACCGA
GGGGGCCATCACTGGCCTGCACGACGTGCTTGCGAGCATGGGGGTGCCCT
CCGCCTACGGCATCTCCATCATCTGCTTCACGCTCTTCGTCAAGGGCATC
ACCTTCCCCCTCACGTACCAGCAGCTCTCGAGCACCACCAAGATGCAGAC
TCTCGGGCCTAAGGTGAAGGAGCTGCAGGCGCGATACGCCAACAACCCCG
AGGCGGCCAACCAGGCGGTGCAGCAGCTGTACCAGACGGAGAACGTCAAC
CCCCTGGCGGGGTGCCTGCCCGCGCTGGCGCAGATCCCTATCTTCATCTC
GCTCTACAGGTCCTTGTTGAACCTGGCCAAGGAGAACAAGCTGACGGAAA
GCTTCTTGTGGATACCAAGCCTGGAAGGGCCGACGTTCGACTCCCCGCCC
ACCGAGATGATGAGCTGGATCAAGGATTGGTCGGACGGGGCGCCGAAGCT
GGGCTGGCACGACACCATCGCGTACATGACCATCCCCCTCATCCTGGTCA
TCACACAGTCCATCTCCACGCGGATCATGCAGCCGCCCAAGGACCCCTCC
CAGCCGGTCGACGAGTCGCAGGCAGCGTCGCAGAAT
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