mRNA_E_fasciculatus_S2_contig732.15509.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycos_transf_1 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS5_ECTSI) HSP 1 Score: 1306 bits (3381), Expect = 0.000e+0 Identity = 728/843 (86.36%), Postives = 754/843 (89.44%), Query Frame = 1
Query: 1 QATGNPFLGTTTTCSPEAAKDVDFVYGLHPSSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVAGFIHCPFSEPFYREEPWLRVALPEHMLQDESGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAA----IEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGRTGRGHDANGGGGIVAGGDGAGHASAAEWGHALLRFAHARQRLRIEAERAVPGLAERFCRVVAADARGQAVRTLMETTTGRRST----SRSRLPGGYELLSAPADRSTTTTSVTAAAAGITDQERVRKATVNNALACVCATCVSISGVGGAVAGLASLVAAQCLLLVGLAPPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVGNGTLSNGXXXXXXDADTAVFEGTGGEGGWVRGGAEGSSPLLCAAGVAVLCASFSIDFFQIWVLLPREEAXXXXXXXXXXAVTNETVGNGSVLGGADEAPSTKAIAAVGEKGAGRERASKNGLCNITAARYAADETAPSHG 2505
+ATGN FLG TTTCSPEAA +VDFVYGL P SATGGCVVQRSFEDDLRAGPGVASVNVHVASDP+SA+RVFELL+R+GELEE RG G SRVLIIDGIALLFLRDRLHELVGGRGGPW N+ VAGFIHCPFSEPFYREEPWLRVALPE MLQDESGAGIRAEE RLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTA+APNVAVAAS IEAGVVPPAA V +SNERPPRFVSVGTLCPRKGQLGLIAALRAACASQP +LGGSVLTLIGGEG DP+YA AVRAAAATA GDESRG AK EGPGRLEVRLLGPLPREETLEHVGASDAFLLNS SESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGR GRG D++GGGGIVAGGDG G ASA EWG ALLRFAHARQRLRIEAERAVPGLAERFCR VAAD RGQAVRTLMETTTG R T RS L GG+EL + P D STTT +TDQERVR+ATVNNALACVCATCVSISG GGA GLA+LVAAQCLLLVGLAPPCSPANLVT+FRSFIPPAVVWF AGSDFGQVSMADVTVFGVLFVLLDV DGILARRSK+GPTRVGAALDVESDSIAVLFLSLAAS+KAWRGGF+AGVLRYLFVLAT+ARELPPSPIGPAGRWVAKIAALASVAALAASVGNG L NG DADTAVFE TGG G WVRGGAEGSSPLLCA GVAVLCASFSIDFFQIWVLLPREEA XXXXXXXX AVTNETVGNGSVLGGADE PSTKAIAAVGE+GAGRE ASKN L NITAA YAA+ +APSHG
Sbjct: 8 RATGNSFLGATTTCSPEAANEVDFVYGLPPGSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPASAKRVFELLRRQGELEE-RGVGSPSRVLIIDGIALLFLRDRLHELVGGRGGPW-NI--VAGFIHCPFSEPFYREEPWLRVALPERMLQDESGAGIRAEERRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTAVAPNVAVAASXXXXXXXXXXIEAGVVPPAASVDVSNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPIKLGGSVLTLIGGEGADPSYAEAVRAAAATAGAGDESRGGAKVEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGREGRGPDSDGGGGIVAGGDGVGLASATEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTLMETTTGTRCTRASCGRSNLLGGFELSNGPTDPSTTTIPA------VTDQERVRRATVNNALACVCATCVSISGAGGAAVGLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQVSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASQKAWRGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASVGNGALRNGGGGG--DADTAVFERTGGRGWWVRGGAEGSSPLLCAVGVAVLCASFSIDFFQIWVLLPREEAAXXXXXXXX-AVTNETVGNGSVLGGADETPSTKAIAAVGEEGAGREGASKNALSNITAAIYAAEGSAPSHG 837
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2X5_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.550e-63 Identity = 108/132 (81.82%), Postives = 118/132 (89.39%), Query Frame = 1
Query: 1 QATGNPFLGTTTTCSPEAAKDVDFVYGLHPSSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVAGFIHCPF 396
+ATGN FL TTTCSPEAAK+VDFVYGLHPSSATGGCVVQRSFEDDLRA PGVASVNVHVASD +SA+ VF+LL+R+G +EE+RGDGP SR LIIDGIALLFLRDRLHELV GRGGPW + VAGFIHCPF
Sbjct: 8 RATGNSFLRATTTCSPEAAKEVDFVYGLHPSSATGGCVVQRSFEDDLRADPGVASVNVHVASDAASAKSVFDLLRRQGGVEEERGDGPPSRALIIDGIALLFLRDRLHELVAGRGGPW---SIVAGFIHCPF 136
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: glycosyltransferase (family 4 protein n=1 Tax=Thiohalocapsa sp. ML1 TaxID=1431688 RepID=UPI0007320A72) HSP 1 Score: 73.2 bits (178), Expect = 4.550e-10 Identity = 82/258 (31.78%), Postives = 106/258 (41.09%), Query Frame = 1
Query: 433 VALPEHMLQDESGAG------IRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGRTGRGHDA 1188
VAL H L E+G +RA ES +VI LL AD+ V I VVEP G P +G + P R V+VGT+ PRKG L LI AL + + L L G DP A A+RA +G+ VRLLG LP H +D F+L S E + +A EA RG+PVL T G +A ++PA++ + V G HDA
Sbjct: 93 VALVHHPLALETGLDAALAERLRASESAALRHARRVIVTSRQTARLL-ADFDVPAARIRVVEP-----------------------GTEPAPLAMGSGGDGPLRLVAVGTVTPRKGHLLLIEAL-----GRLRHLDWR-LDCAGSLDRDPTTAAALRARIEALGLGER--------------VRLLGELPPAALEPHYARADLFVLASLFEGYGMAYAEALARGLPVLGTTGGAIADTVPADAGLLVPPGDVEALHDA 306
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: D-inositol (3-phosphate glycosyltransferase n=1 Tax=Halomonas lysinitropha TaxID=2607506 RepID=A0A5K1I5K0_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 7.280e-8 Identity = 92/334 (27.54%), Postives = 133/334 (39.82%), Query Frame = 1
Query: 178 VASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVA-GFIHCPFSEPFYREEPWLRV-ALPEHMLQDESGA------GIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWV 1155
VA DP +R + + E R G R V+ + G L + H L DN V G + R LR+ AL H L DE+G G R E+R +V+ L DYGV E+ + V EP V +A A A++ + RP R + V TL PRKG LG++ A +P V ++G D +A A+ A ++ + RL+ +G +E E +D F+L SF E + + EA RG+PV++T G LA +LP E+ I V
Sbjct: 13 VAGDPD--QRTGGYVYDARMVAELRRQGWRVEVMGLAGCFPLADQTARHSLSKALATLPDNARVVIDGLAMGGLPDEVERHAELLRIIALVHHPLADETGLDVAQQKGFRDSETRALAAARRVVVTSHHTARALR-DYGVPEDRLRVAEP---------GVDKAALAGGALDH----------VDRSRPWRLLCVATLTPRKG-LGVLVEALAGLTDRPW-----VCKVVGSHERDAEHAAALMAETRRLDMAE------------RLD--FVGERNADELAEAYRQADLFVLPSFYEGYGMVVTEALSRGLPVITTTGGALADTLPPEAGIAV 304
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycosyltransferase (family 4 protein n=2 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858XE21_9HYPH) HSP 1 Score: 66.2 bits (160), Expect = 9.580e-8 Identity = 73/257 (28.40%), Postives = 103/257 (40.08%), Query Frame = 1
Query: 412 REEPWLR-----VALPEHMLQDESGAG------IRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTI 1149
RE P L +AL H L +E+G +RA E +V+ T LT D+ V E IVV P PAA+ S + ++VG+L PRKG L L+AAL A L L+G G DPA+A + AA + + V L GPL R E ++D F+L S E + +A E RG+PV+ T G +A+++ A +
Sbjct: 101 REAPQLAARGPLIALVHHPLANETGLAADHARALRASEWAALSHAGRVVVTSPATATALTRDFEVAAERIVVAVPG------------------------TDPAAFARGSGGPGVQLIAVGSLIPRKGHLDLLAALEELRALD------WWLDLVGDPGLDPAHAAEIVAAIHRYALSER--------------VALHGPLGRAELDALYDSADIFVLASHYEGYGMAYAEGIARGLPVVGTTGGAIAETVGAAGEL 313
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycosyltransferase (n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2RTH2_9PROT) HSP 1 Score: 63.9 bits (154), Expect = 4.680e-7 Identity = 74/248 (29.84%), Postives = 102/248 (41.13%), Query Frame = 1
Query: 433 VALPEHMLQDESGAG-------IRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWV 1155
+AL H L E+G + +E + LF +VI A R +L ++ V I V EP P P +AW PPR +SV +L PRK L LI AL A A P +L ++G DP ARAVR A G V +G EE +D F+ S E + +A +EA RG+PV++TR G +A+ LP ++ I V
Sbjct: 93 IALVHHPLAYEAGLPPGEVRRLMASERAALFHAR-RVIVTSATTREVLVREFAVPIHRITVAEPGIDPAEP------------------APGSAW------NPPRLLSVASLTPRKDHLTLIRAL-AHIADLPWRL-----DIVGSATRDPVTARAVREAVIAFGFGHR--------------VVFVGECQGEELEAAWRPADLFVSASRYEGYGMALMEAVARGLPVVATRGGAVAEVLPPDAAILV 295
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: CDP-alcohol (phosphatidyltransferase family protein n=1 Tax=Streptomyces oryziradicis TaxID=2571141 RepID=A0A4U0SIJ5_9ACTN) HSP 1 Score: 62.0 bits (149), Expect = 1.150e-6 Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 1591 GVGGAVAGLASLVAAQCLLLVGLA------PPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVG 2085
G G + GLA +A +L L+ P PAN VT+ R+ + V A S S+A + + ++LD VDG +ARR+ T T +GA D+E D++ +L LS+ + + GV+RY+FV A P+ P+ A +AAL + L A G
Sbjct: 39 GPAGWLTGLAFALATWAILTHALSRSWPRPPSFGPANRVTLARAILVGGVTTLVADSFESPPSVAVLVALATVALILDAVDGQVARRTGTA-TLLGARFDMEVDAVLILVLSVYVAVPLGAWVLLIGVMRYVFVAAARVLPWLRGPLPPSTARKA-VAALQGIVLLVAGAG 207
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycosyltransferase (family 4 protein n=1 Tax=Pistricoccus aurantiacus TaxID=1883414 RepID=A0A5B8SSV0_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 1.600e-6 Identity = 88/307 (28.66%), Postives = 127/307 (41.37%), Query Frame = 1
Query: 223 KRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVAGFIHCPFSEPFYREEPWLRVALPEHMLQDESGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAES 1143
+ R L++ D P + +IIDG+AL N+ VA +E R + AL H L DESG +E R L ++ A+G R ++T+++ R + VE + P V ++ + AW + + P + V TL PRKG LI AL + LIG DP + R +R T E G ESR S GE +V L E H +D +L SF E + + EA RG+PV++T G LA +LPAE+
Sbjct: 60 RAREALQQALRDQPEGQAVIIDGLAL------------------GNLPAVA-------AEQASRLD---LTALVHHPLGDESGL---SESQRDAYLANECQALGQVARVIVTSNFTARRLKALGVEGPIQVVEPGV------------DSAPLAQRAWPALPGQ-PVSLLCVATLTPRKGHGVLIEALADLIDHEWH------CRLIGAADRDPDWTRCLRDR--TREFGLESRISFDGE----CDVATL------EAAYH--QADVLVLPSFYEGYGMVITEALARGLPVIATTGGALADTLPAEA 302
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: CDP-alcohol (phosphatidyltransferase family protein n=2 Tax=Blastococcus sp. CT_GayMR19 TaxID=2559608 RepID=A0A4Y9PBJ9_9ACTN) HSP 1 Score: 61.6 bits (148), Expect = 1.670e-6 Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 1
Query: 1600 GAVAGLASLVAAQCLLLVGL----APPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVG 2085
GA+AGLA A LL A PA+LVT+ R+ + V A S G +A +T V+ ++LD VDG +AR + T + VGA D+E DS+ VL LS+ + G + Y+FV+A +P P W +AA+ + + A+ G
Sbjct: 78 GALAGLAYAAVAVALLSRAFRRSGAGTMGPADLVTLTRAALVGGVAALVADSFVGSEPVAALTALAVVALVLDAVDGRVARNTGT-VSAVGARFDMEVDSVLVLLLSVYVAHSLGPWVVAIGSVHYVFVVARRGLFWLRAP-APPRYWCKVVAAVQGITLVTAAAG 241
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: CDP-alcohol (phosphatidyltransferase family protein n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A7J9ZI95_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 1.740e-6 Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 1552 ALACVCATCVSISGVGGAVAGLASLVAAQCLLLVGLAPP----CSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLA 1980
AL V A V +S VG V + LV LL+VGLA AN VT+FR+ + V A S VS+ + V + +LLD VDG +ARR++ + +GA D E D+ +L LS+A +R GV RY ++ A
Sbjct: 15 ALLAVLAGTVGLSAVGWLVGAVYGLVV-NALLVVGLARSGARVLGSANAVTLFRATLVGGVAALIADSLVRSVSVPMIVVLAAVALLLDAVDGRVARRTRM-VSPLGAIFDQEIDAFLILILSVAVARSIGLWVLAIGVARYAYMAA 159 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig732.15509.1 >prot_E_fasciculatus_S2_contig732.15509.1 ID=prot_E_fasciculatus_S2_contig732.15509.1|Name=mRNA_E_fasciculatus_S2_contig732.15509.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=836bp QATGNPFLGTTTTCSPEAAKDVDFVYGLHPSSATGGCVVQRSFEDDLRAGback to top mRNA from alignment at E_fasciculatus_S2_contig732:3032..7163+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig732.15509.1 ID=mRNA_E_fasciculatus_S2_contig732.15509.1|Name=mRNA_E_fasciculatus_S2_contig732.15509.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4132bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig732:3032..7163+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig732:3032..7163+ >mRNA_E_fasciculatus_S2_contig732.15509.1 ID=mRNA_E_fasciculatus_S2_contig732.15509.1|Name=mRNA_E_fasciculatus_S2_contig732.15509.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2508bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig732:3032..7163+ (Ectocarpus fasciculatus EfasUO2)back to top |