mRNA_E_fasciculatus_S2_contig732.15509.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig732.15509.1
Unique NamemRNA_E_fasciculatus_S2_contig732.15509.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycos_transf_1 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS5_ECTSI)

HSP 1 Score: 1306 bits (3381), Expect = 0.000e+0
Identity = 728/843 (86.36%), Postives = 754/843 (89.44%), Query Frame = 1
Query:    1 QATGNPFLGTTTTCSPEAAKDVDFVYGLHPSSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVAGFIHCPFSEPFYREEPWLRVALPEHMLQDESGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAA----IEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGRTGRGHDANGGGGIVAGGDGAGHASAAEWGHALLRFAHARQRLRIEAERAVPGLAERFCRVVAADARGQAVRTLMETTTGRRST----SRSRLPGGYELLSAPADRSTTTTSVTAAAAGITDQERVRKATVNNALACVCATCVSISGVGGAVAGLASLVAAQCLLLVGLAPPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVGNGTLSNGXXXXXXDADTAVFEGTGGEGGWVRGGAEGSSPLLCAAGVAVLCASFSIDFFQIWVLLPREEAXXXXXXXXXXAVTNETVGNGSVLGGADEAPSTKAIAAVGEKGAGRERASKNGLCNITAARYAADETAPSHG 2505
            +ATGN FLG TTTCSPEAA +VDFVYGL P SATGGCVVQRSFEDDLRAGPGVASVNVHVASDP+SA+RVFELL+R+GELEE RG G  SRVLIIDGIALLFLRDRLHELVGGRGGPW N+  VAGFIHCPFSEPFYREEPWLRVALPE MLQDESGAGIRAEE RLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTA+APNVAVAAS          IEAGVVPPAA V +SNERPPRFVSVGTLCPRKGQLGLIAALRAACASQP +LGGSVLTLIGGEG DP+YA AVRAAAATA  GDESRG AK EGPGRLEVRLLGPLPREETLEHVGASDAFLLNS SESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGR GRG D++GGGGIVAGGDG G ASA EWG ALLRFAHARQRLRIEAERAVPGLAERFCR VAAD RGQAVRTLMETTTG R T     RS L GG+EL + P D STTT         +TDQERVR+ATVNNALACVCATCVSISG GGA  GLA+LVAAQCLLLVGLAPPCSPANLVT+FRSFIPPAVVWF AGSDFGQVSMADVTVFGVLFVLLDV DGILARRSK+GPTRVGAALDVESDSIAVLFLSLAAS+KAWRGGF+AGVLRYLFVLAT+ARELPPSPIGPAGRWVAKIAALASVAALAASVGNG L NG      DADTAVFE TGG G WVRGGAEGSSPLLCA GVAVLCASFSIDFFQIWVLLPREEA XXXXXXXX AVTNETVGNGSVLGGADE PSTKAIAAVGE+GAGRE ASKN L NITAA YAA+ +APSHG
Sbjct:    8 RATGNSFLGATTTCSPEAANEVDFVYGLPPGSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPASAKRVFELLRRQGELEE-RGVGSPSRVLIIDGIALLFLRDRLHELVGGRGGPW-NI--VAGFIHCPFSEPFYREEPWLRVALPERMLQDESGAGIRAEERRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTAVAPNVAVAASXXXXXXXXXXIEAGVVPPAASVDVSNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPIKLGGSVLTLIGGEGADPSYAEAVRAAAATAGAGDESRGGAKVEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGREGRGPDSDGGGGIVAGGDGVGLASATEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTLMETTTGTRCTRASCGRSNLLGGFELSNGPTDPSTTTIPA------VTDQERVRRATVNNALACVCATCVSISGAGGAAVGLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQVSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASQKAWRGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASVGNGALRNGGGGG--DADTAVFERTGGRGWWVRGGAEGSSPLLCAVGVAVLCASFSIDFFQIWVLLPREEAAXXXXXXXX-AVTNETVGNGSVLGGADETPSTKAIAAVGEEGAGREGASKNALSNITAAIYAAEGSAPSHG 837          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2X5_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.550e-63
Identity = 108/132 (81.82%), Postives = 118/132 (89.39%), Query Frame = 1
Query:    1 QATGNPFLGTTTTCSPEAAKDVDFVYGLHPSSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVAGFIHCPF 396
            +ATGN FL  TTTCSPEAAK+VDFVYGLHPSSATGGCVVQRSFEDDLRA PGVASVNVHVASD +SA+ VF+LL+R+G +EE+RGDGP SR LIIDGIALLFLRDRLHELV GRGGPW   + VAGFIHCPF
Sbjct:    8 RATGNSFLRATTTCSPEAAKEVDFVYGLHPSSATGGCVVQRSFEDDLRADPGVASVNVHVASDAASAKSVFDLLRRQGGVEEERGDGPPSRALIIDGIALLFLRDRLHELVAGRGGPW---SIVAGFIHCPF 136          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: glycosyltransferase (family 4 protein n=1 Tax=Thiohalocapsa sp. ML1 TaxID=1431688 RepID=UPI0007320A72)

HSP 1 Score: 73.2 bits (178), Expect = 4.550e-10
Identity = 82/258 (31.78%), Postives = 106/258 (41.09%), Query Frame = 1
Query:  433 VALPEHMLQDESGAG------IRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGRTGRGHDA 1188
            VAL  H L  E+G        +RA ES       +VI        LL AD+ V    I VVEP                       G  P    +G   + P R V+VGT+ PRKG L LI AL      + + L    L   G    DP  A A+RA      +G+               VRLLG LP      H   +D F+L S  E + +A  EA  RG+PVL T  G +A ++PA++ + V  G     HDA
Sbjct:   93 VALVHHPLALETGLDAALAERLRASESAALRHARRVIVTSRQTARLL-ADFDVPAARIRVVEP-----------------------GTEPAPLAMGSGGDGPLRLVAVGTVTPRKGHLLLIEAL-----GRLRHLDWR-LDCAGSLDRDPTTAAALRARIEALGLGER--------------VRLLGELPPAALEPHYARADLFVLASLFEGYGMAYAEALARGLPVLGTTGGAIADTVPADAGLLVPPGDVEALHDA 306          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: D-inositol (3-phosphate glycosyltransferase n=1 Tax=Halomonas lysinitropha TaxID=2607506 RepID=A0A5K1I5K0_9GAMM)

HSP 1 Score: 66.6 bits (161), Expect = 7.280e-8
Identity = 92/334 (27.54%), Postives = 133/334 (39.82%), Query Frame = 1
Query:  178 VASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVA-GFIHCPFSEPFYREEPWLRV-ALPEHMLQDESGA------GIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWV 1155
            VA DP   +R    +     + E R  G R  V+ + G   L  +   H L        DN   V  G       +   R    LR+ AL  H L DE+G       G R  E+R      +V+         L  DYGV E+ + V EP          V  +A A  A++           +   RP R + V TL PRKG LG++    A    +P      V  ++G    D  +A A+ A     ++ +            RL+   +G    +E  E    +D F+L SF E + +   EA  RG+PV++T  G LA +LP E+ I V
Sbjct:   13 VAGDPD--QRTGGYVYDARMVAELRRQGWRVEVMGLAGCFPLADQTARHSLSKALATLPDNARVVIDGLAMGGLPDEVERHAELLRIIALVHHPLADETGLDVAQQKGFRDSETRALAAARRVVVTSHHTARALR-DYGVPEDRLRVAEP---------GVDKAALAGGALDH----------VDRSRPWRLLCVATLTPRKG-LGVLVEALAGLTDRPW-----VCKVVGSHERDAEHAAALMAETRRLDMAE------------RLD--FVGERNADELAEAYRQADLFVLPSFYEGYGMVVTEALSRGLPVITTTGGALADTLPPEAGIAV 304          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycosyltransferase (family 4 protein n=2 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858XE21_9HYPH)

HSP 1 Score: 66.2 bits (160), Expect = 9.580e-8
Identity = 73/257 (28.40%), Postives = 103/257 (40.08%), Query Frame = 1
Query:  412 REEPWLR-----VALPEHMLQDESGAG------IRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTI 1149
            RE P L      +AL  H L +E+G        +RA E        +V+       T LT D+ V  E IVV  P                           PAA+   S     + ++VG+L PRKG L L+AAL    A          L L+G  G DPA+A  + AA     + +               V L GPL R E      ++D F+L S  E + +A  E   RG+PV+ T  G +A+++ A   +
Sbjct:  101 REAPQLAARGPLIALVHHPLANETGLAADHARALRASEWAALSHAGRVVVTSPATATALTRDFEVAAERIVVAVPG------------------------TDPAAFARGSGGPGVQLIAVGSLIPRKGHLDLLAALEELRALD------WWLDLVGDPGLDPAHAAEIVAAIHRYALSER--------------VALHGPLGRAELDALYDSADIFVLASHYEGYGMAYAEGIARGLPVVGTTGGAIAETVGAAGEL 313          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycosyltransferase (n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2RTH2_9PROT)

HSP 1 Score: 63.9 bits (154), Expect = 4.680e-7
Identity = 74/248 (29.84%), Postives = 102/248 (41.13%), Query Frame = 1
Query:  433 VALPEHMLQDESGAG-------IRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWV 1155
            +AL  H L  E+G         + +E + LF    +VI   A  R +L  ++ V    I V EP      P                   P +AW       PPR +SV +L PRK  L LI AL A  A  P +L      ++G    DP  ARAVR A      G                V  +G    EE       +D F+  S  E + +A +EA  RG+PV++TR G +A+ LP ++ I V
Sbjct:   93 IALVHHPLAYEAGLPPGEVRRLMASERAALFHAR-RVIVTSATTREVLVREFAVPIHRITVAEPGIDPAEP------------------APGSAW------NPPRLLSVASLTPRKDHLTLIRAL-AHIADLPWRL-----DIVGSATRDPVTARAVREAVIAFGFGHR--------------VVFVGECQGEELEAAWRPADLFVSASRYEGYGMALMEAVARGLPVVATRGGAVAEVLPPDAAILV 295          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: CDP-alcohol (phosphatidyltransferase family protein n=1 Tax=Streptomyces oryziradicis TaxID=2571141 RepID=A0A4U0SIJ5_9ACTN)

HSP 1 Score: 62.0 bits (149), Expect = 1.150e-6
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 1591 GVGGAVAGLASLVAAQCLLLVGLA------PPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVG 2085
            G  G + GLA  +A   +L   L+      P   PAN VT+ R+ +   V    A S     S+A +     + ++LD VDG +ARR+ T  T +GA  D+E D++ +L LS+  +        + GV+RY+FV A         P+ P+    A +AAL  +  L A  G
Sbjct:   39 GPAGWLTGLAFALATWAILTHALSRSWPRPPSFGPANRVTLARAILVGGVTTLVADSFESPPSVAVLVALATVALILDAVDGQVARRTGTA-TLLGARFDMEVDAVLILVLSVYVAVPLGAWVLLIGVMRYVFVAAARVLPWLRGPLPPSTARKA-VAALQGIVLLVAGAG 207          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: Glycosyltransferase (family 4 protein n=1 Tax=Pistricoccus aurantiacus TaxID=1883414 RepID=A0A5B8SSV0_9GAMM)

HSP 1 Score: 62.4 bits (150), Expect = 1.600e-6
Identity = 88/307 (28.66%), Postives = 127/307 (41.37%), Query Frame = 1
Query:  223 KRRGELEEKRGDGPRSRVLIIDGIALLFLRDRLHELVGGRGGPWDNVANVAGFIHCPFSEPFYREEPWLRVALPEHMLQDESGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAATAEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAES 1143
            + R  L++   D P  + +IIDG+AL                   N+  VA       +E   R +     AL  H L DESG    +E  R   L ++  A+G   R ++T+++  R    + VE     + P V            ++  +   AW  +  + P   + V TL PRKG   LI AL      +          LIG    DP + R +R    T E G ESR S  GE     +V  L      E   H   +D  +L SF E + +   EA  RG+PV++T  G LA +LPAE+
Sbjct:   60 RAREALQQALRDQPEGQAVIIDGLAL------------------GNLPAVA-------AEQASRLD---LTALVHHPLGDESGL---SESQRDAYLANECQALGQVARVIVTSNFTARRLKALGVEGPIQVVEPGV------------DSAPLAQRAWPALPGQ-PVSLLCVATLTPRKGHGVLIEALADLIDHEWH------CRLIGAADRDPDWTRCLRDR--TREFGLESRISFDGE----CDVATL------EAAYH--QADVLVLPSFYEGYGMVITEALARGLPVIATTGGALADTLPAEA 302          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: CDP-alcohol (phosphatidyltransferase family protein n=2 Tax=Blastococcus sp. CT_GayMR19 TaxID=2559608 RepID=A0A4Y9PBJ9_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 1.670e-6
Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 1
Query: 1600 GAVAGLASLVAAQCLLLVGL----APPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVG 2085
            GA+AGLA    A  LL        A    PA+LVT+ R+ +   V    A S  G   +A +T   V+ ++LD VDG +AR + T  + VGA  D+E DS+ VL LS+  +          G + Y+FV+A        +P  P   W   +AA+  +  + A+ G
Sbjct:   78 GALAGLAYAAVAVALLSRAFRRSGAGTMGPADLVTLTRAALVGGVAALVADSFVGSEPVAALTALAVVALVLDAVDGRVARNTGT-VSAVGARFDMEVDSVLVLLLSVYVAHSLGPWVVAIGSVHYVFVVARRGLFWLRAP-APPRYWCKVVAAVQGITLVTAAAG 241          
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Match: CDP-alcohol (phosphatidyltransferase family protein n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A7J9ZI95_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-6
Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 1552 ALACVCATCVSISGVGGAVAGLASLVAAQCLLLVGLAPP----CSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVLLDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVAGVLRYLFVLA 1980
            AL  V A  V +S VG  V  +  LV    LL+VGLA         AN VT+FR+ +   V    A S    VS+  + V   + +LLD VDG +ARR++   + +GA  D E D+  +L LS+A +R         GV RY ++ A
Sbjct:   15 ALLAVLAGTVGLSAVGWLVGAVYGLVV-NALLVVGLARSGARVLGSANAVTLFRATLVGGVAALIADSLVRSVSVPMIVVLAAVALLLDAVDGRVARRTRM-VSPLGAIFDQEIDAFLILILSVAVARSIGLWVLAIGVARYAYMAA 159          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig732.15509.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Glycos_transf_10.000e+086.36domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Uncharacterized1.550e-6381.82protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
glycosyltransferase4.550e-1031.78family 4 protein n=1 Tax=Thiohalocapsa sp. ML1 Tax... [more]
D-inositol7.280e-827.543-phosphate glycosyltransferase n=1 Tax=Halomonas ... [more]
Glycosyltransferase9.580e-828.40family 4 protein n=2 Tax=Starkeya sp. ORNL1 TaxID=... [more]
Glycosyltransferase4.680e-729.84n=1 Tax=Rhodospirillales bacterium TaxID=2026786 R... [more]
CDP-alcohol1.150e-631.58phosphatidyltransferase family protein n=1 Tax=Str... [more]
Glycosyltransferase1.600e-628.66family 4 protein n=1 Tax=Pistricoccus aurantiacus ... [more]
CDP-alcohol1.670e-632.53phosphatidyltransferase family protein n=2 Tax=Bla... [more]
CDP-alcohol1.740e-636.05phosphatidyltransferase family protein n=1 Tax=Str... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig732contigE_fasciculatus_S2_contig732:3032..7163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start0
Seed ortholog score72.8
Seed ortholog evalue8.6e-10
Seed eggNOG ortholog1158762.KB898038_gene2034
Model size2508
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Glycosyl transferases group 1
EggNOG OGs1P81Z@1224,1RYFP@1236,1WZ87@135613,COG0438@1,COG0438@2
Ec32 ortholog descriptionGlycosyl transferase, family 1
Ec32 orthologEc-14_001010.1
Cds size2508
COG Functional cat.M
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842396.0692172-CDS-E_fasciculatus_S2_contig732:3031..34291696842396.0692172-CDS-E_fasciculatus_S2_contig732:3031..3429Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig732 3032..3429 +
1696842396.0819046-CDS-E_fasciculatus_S2_contig732:3955..53121696842396.0819046-CDS-E_fasciculatus_S2_contig732:3955..5312Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig732 3956..5312 +
1696842396.0919235-CDS-E_fasciculatus_S2_contig732:5930..61011696842396.0919235-CDS-E_fasciculatus_S2_contig732:5930..6101Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig732 5931..6101 +
1696842396.1039433-CDS-E_fasciculatus_S2_contig732:6581..71631696842396.1039433-CDS-E_fasciculatus_S2_contig732:6581..7163Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig732 6582..7163 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig732.15509.1prot_E_fasciculatus_S2_contig732.15509.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig732 3032..7163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig732.15509.1

>prot_E_fasciculatus_S2_contig732.15509.1 ID=prot_E_fasciculatus_S2_contig732.15509.1|Name=mRNA_E_fasciculatus_S2_contig732.15509.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=836bp
QATGNPFLGTTTTCSPEAAKDVDFVYGLHPSSATGGCVVQRSFEDDLRAG
PGVASVNVHVASDPSSAERVFELLKRRGELEEKRGDGPRSRVLIIDGIAL
LFLRDRLHELVGGRGGPWDNVANVAGFIHCPFSEPFYREEPWLRVALPEH
MLQDESGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVE
PTFTALAPNVAVAASASAAAAIEAGVVPPAAWVGISNERPPRFVSVGTLC
PRKGQLGLIAALRAACASQPKQLGGSVLTLIGGEGTDPAYARAVRAAAAT
AEVGDESRGSAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSFSES
WAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGRTGRGHDANGGG
GIVAGGDGAGHASAAEWGHALLRFAHARQRLRIEAERAVPGLAERFCRVV
AADARGQAVRTLMETTTGRRSTSRSRLPGGYELLSAPADRSTTTTSVTAA
AAGITDQERVRKATVNNALACVCATCVSISGVGGAVAGLASLVAAQCLLL
VGLAPPCSPANLVTIFRSFIPPAVVWFKAGSDFGQVSMADVTVFGVLFVL
LDVVDGILARRSKTGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFVA
GVLRYLFVLATNARELPPSPIGPAGRWVAKIAALASVAALAASVGNGTLS
NGGGGGGGDADTAVFEGTGGEGGWVRGGAEGSSPLLCAAGVAVLCASFSI
DFFQIWVLLPREEAAAAAAAAAASAVTNETVGNGSVLGGADEAPSTKAIA
AVGEKGAGRERASKNGLCNITAARYAADETAPSHG*
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mRNA from alignment at E_fasciculatus_S2_contig732:3032..7163+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig732.15509.1 ID=mRNA_E_fasciculatus_S2_contig732.15509.1|Name=mRNA_E_fasciculatus_S2_contig732.15509.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4132bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig732:3032..7163+ (Ectocarpus fasciculatus EfasUO2)
CAGGCTACGGGGAATCCCTTCCTCGGAACGACCACCACGTGCTCGCCGGA AGCGGCGAAAGATGTCGACTTCGTCTACGGCCTCCATCCCAGTAGCGCGA CCGGCGGGTGCGTTGTCCAGAGGTCATTCGAGGACGATCTCCGCGCTGGT CCCGGCGTCGCTTCGGTAAACGTTCACGTTGCCTCCGACCCGTCGTCCGC GGAACGCGTGTTCGAGCTGCTAAAGCGGCGAGGAGAGCTCGAGGAGAAGA GGGGGGACGGACCACGTTCGCGAGTCCTTATCATCGACGGCATTGCTCTC CTCTTCTTGCGGGATAGGCTGCACGAGCTGGTGGGGGGGCGCGGCGGACC ATGGGATAATGTGGCTAATGTGGCTGGGTTCATCCACTGCCCTTTCAGGT AATTTTACCCTTCCTTTCTGTTTTGCCGTCTTTTACTGCTGTATCGGAGC CGCTGTAAATGGAGATGTGGGCACTTTTTTCCCGCTCACGATGCGTCAGC TAGCAAGTGACGCTGAACGAGGGGGGGGAGGCAGGGGGGGCGGGGGTCGG AAGTTACACGAATGGATTTTTAGTTTGTTTCTCGAGATGATGGCATGTCC GAACCAGACCGGGTTTTGCTTACGAGCCGAGTGGAATATGTTTCATGTTC CTTCTCTTGATAGCAGTGGAAATCCGCGCTATTTTCCCTCCCGCAATACG TGCCGCGGGCGCACGTTCCGGTAGCTGTCACAATGTGGGAAAATACTCTC TCGTTGCGATGTCTCTTTCGCCACCGCTTCTGCTGTCGGCGATCCCTAAA AAAGGTCTTGCTTGTTTTTTTTTACAAATACACGGAAATGCTCATCGTTT GTGGCGAATGGACCCTTGACCTCGATTTCCCCTCGTTGCGATGCCGGATT GTTGTTGTGATGACCTGCCGGTAGCGAGCCTTTTTACCGCGAGGAACCGT GGCTTAGAGTCGCGCTTCCCGAGCACATGCTCCAGGACGAGAGCGGCGCG GGTATCCGCGCGGAGGAGAGTCGGCTCTTCGGCCTGTTGGACAAGGTCAT CGCCGTAGGGGCGCCCTGCCGCACCCTCCTCACGGCCGACTACGGCGTGC GGGAAGAAGCTATCGTCGTTGTCGAGCCCACGTTTACCGCGCTGGCACCG AACGTCGCTGTGGCCGCTTCTGCCTCCGCTGCGGCTGCAATCGAAGCGGG TGTCGTACCTCCAGCCGCTTGGGTTGGCATCTCGAATGAGCGCCCTCCAA GGTTCGTATCAGTCGGCACTCTGTGTCCTCGGAAGGGCCAACTTGGGCTT ATCGCCGCTCTCAGGGCCGCCTGCGCCTCGCAACCGAAGCAACTAGGCGG CTCCGTGCTCACGCTCATAGGCGGCGAGGGGACCGATCCCGCCTACGCTC GGGCCGTCAGGGCGGCGGCGGCAACCGCCGAGGTCGGCGATGAGAGTAGA GGGAGCGCCAAAGGAGAAGGACCGGGGCGGTTGGAGGTGCGGCTTCTAGG ACCCTTACCGAGGGAGGAGACCCTCGAGCACGTGGGCGCGAGCGACGCCT TCTTGTTGAACTCCTTCTCCGAGAGCTGGGCCGTGGCCCCGGTAGAAGCG GCCCTGCGCGGGGTGCCGGTGCTCTCCACGCGGGTCGGTTGGTTGGCTCA GTCGTTACCCGCCGAGTCGACTATATGGGTTGGTTCGGGCCGGACCGGGC GAGGACATGATGCCAACGGCGGCGGCGGTATCGTCGCCGGTGGCGACGGG GCCGGGCATGCGTCGGCGGCCGAGTGGGGACACGCGCTTCTCAGGTTTGC GCACGCCCGGCAGCGATTGAGAATCGAGGCGGAGCGTGCCGTGCCGGGCC TCGCTGAGAGGTTCTGCCGAGTGGTGGCGGCGGACGCGCGAGGCCAAGCC GTCCGGACTCTCATGGAAACGACAACGGGGAGAAGAAGCACCAGCCGCTC TCGTCTCCCCGGGGGATATGAGCTGTTGAGCGCACCTGCTGATCGTTCGA CCACCACCACTTCAGTCACCGCCGCCGCCGCCGGAATCACTGATCAAGAG CGGGTGAGAAAGGCCACAGTGAACAACGCCCTCGCTTGTGTGTGCGCGAC CTGTGTCTCGATCAGCGGCGTGGGTGGCGCGGTGGCAGGCCTTGCGTCCT TGGTCGCTGCGCAGTGCCTGCTGCTTGTCGGACTGGCCCCGCCTTGCTCG CCGGCGAACCTCGTCACCATTTTTCGGAGCTTTATCCCGCCGGCGGTGGT GTGGTTCAAGGCTGGGTCGGATTTCGGCCAGGTGAGAGGACGAGAGATAT GGGAGAGAGGGAAACAAAATGCCAGAGTAGCTCCGTGTGTGCACCTTCGA TGCGAAAAGTGTACAGGGCGTGCTTTGAGTGATCGCGGTCGATCAAAATA TCACTTGCTTATCGTGGTTTTCCCTTTTTGCTCCTGTAGGGATCTTCCTT TGTACGTCTGCCTTGGTATCATGGCCGGGTTTGAGTGAGGCTCCTGCAGT GCTGTGTTGTTTTTTCTCCCGCAGACAGAGGGGACCGCGGTGGTCTAAAC AATCAATAGTGGTGGCTTGGCTATGCAGCGATGACCCGGTCCCCTACATG TCATCATCATGGTTTCACCACCCTCACAATCTTGCATTCATCCTGATTCA TTCGCCTACCCTCTCATGTGAACCCAAACATTCACCGTTCTTCATGCAGA CACCAGTCAGCATCAACGGACTACACGGTAGTGGGAATGCTCGGCGTACC GTCCGTGCTGATCGGAAGAGTGGCGTGCGCCACTAGAAACGCCCCCCGCG CACCTCCATCTTCTTCATGGACATGGCGCGCAACTAATTGTGCGTGAAAC TCCTCTGCGTTTTTTTCCCGACGCGTGCATGCCTGCTACTATGTTGCAGG TGTCTATGGCTGACGTAACTGTCTTTGGAGTGCTTTTCGTGCTGCTTGAC GTGGTGGACGGTATCCTGGCGCGGCGATCGAAAACCGGTCCCACGCGCGT CGGAGCGGCGCTCGACGTTGAAAGCGATTCCATCGCCGTGCTGTTCCTGA GCCTTGCAGCTAGCCGGAAGGTTGGTCGGATTTTTCTTGTTCGCTATTTT CATGAAGCATGTCGTCATTTGAACCGCATTACTTCGTATTTTCTTTGAGC GGGCGACCACCCCCCCCCGCCGGTACATCCAAGTCATGTTGTTGGTTAAG AGGACGCTTGACTCCCTTCCAGTGTACATGAATCAAGTTCGAGAACGCAT GTTCTGGTGCCTTTCGGCCCTGCAGTTGGGGTCGTCGAGTATTCCCACGC CGCAGCACCTGTAGATTCACCCCGAGGTGTACTTTCGGTTTCAGGTGAAT GGGCTTCGTCGCTAAGTGGGATGATCCCAACACCAGCCAAACCTGCCACC ATCCCCCAACGCGCGCGCCCGCCCGCTCATCAAGAAATATACCTTTTAAT TGCCGTGGTGAAAAAAAAAACTCCGTACAGCTAAGAGCCCCCCCCCCGTC GTACTTATCCATTTCGTGTCCCCCCCCCGCTCCGTCCCTCTTATGCAAAG GCGTGGCGTGGGGGATTTGTCGCTGGCGTCCTCCGGTACCTCTTTGTATT GGCTACCAACGCTCGCGAGCTCCCGCCGTCGCCCATAGGCCCTGCCGGGC GGTGGGTCGCCAAAATCGCCGCTCTTGCTAGCGTCGCCGCTCTTGCGGCT TCCGTCGGTAACGGCACCCTGAGTAACGGCGGCGGGGGCGGCGGCGGGGA TGCCGACACGGCGGTGTTTGAGGGAACCGGAGGGGAGGGCGGGTGGGTGC GGGGCGGGGCGGAGGGTTCGTCCCCTTTGCTGTGCGCGGCCGGAGTGGCC GTGCTGTGCGCGTCATTTTCGATCGACTTCTTTCAGATTTGGGTCCTGTT GCCGCGGGAGGAGGCGGCAGCAGCGGCGGCGGCGGCGGCAGCGAGTGCGG TCACGAATGAAACCGTCGGAAACGGCAGCGTCCTTGGCGGGGCGGACGAG GCCCCTTCGACCAAGGCGATCGCCGCCGTCGGCGAGAAGGGGGCGGGGAG GGAGCGCGCCAGCAAGAACGGCCTCTGCAACATAACGGCGGCGAGGTATG CCGCCGACGAGACTGCACCTAGTCACGGCTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig732:3032..7163+

>mRNA_E_fasciculatus_S2_contig732.15509.1 ID=mRNA_E_fasciculatus_S2_contig732.15509.1|Name=mRNA_E_fasciculatus_S2_contig732.15509.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2508bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig732:3032..7163+ (Ectocarpus fasciculatus EfasUO2)
CAGGCTACGGGGAATCCCTTCCTCGGAACGACCACCACGTGCTCGCCGGA
AGCGGCGAAAGATGTCGACTTCGTCTACGGCCTCCATCCCAGTAGCGCGA
CCGGCGGGTGCGTTGTCCAGAGGTCATTCGAGGACGATCTCCGCGCTGGT
CCCGGCGTCGCTTCGGTAAACGTTCACGTTGCCTCCGACCCGTCGTCCGC
GGAACGCGTGTTCGAGCTGCTAAAGCGGCGAGGAGAGCTCGAGGAGAAGA
GGGGGGACGGACCACGTTCGCGAGTCCTTATCATCGACGGCATTGCTCTC
CTCTTCTTGCGGGATAGGCTGCACGAGCTGGTGGGGGGGCGCGGCGGACC
ATGGGATAATGTGGCTAATGTGGCTGGGTTCATCCACTGCCCTTTCAGCG
AGCCTTTTTACCGCGAGGAACCGTGGCTTAGAGTCGCGCTTCCCGAGCAC
ATGCTCCAGGACGAGAGCGGCGCGGGTATCCGCGCGGAGGAGAGTCGGCT
CTTCGGCCTGTTGGACAAGGTCATCGCCGTAGGGGCGCCCTGCCGCACCC
TCCTCACGGCCGACTACGGCGTGCGGGAAGAAGCTATCGTCGTTGTCGAG
CCCACGTTTACCGCGCTGGCACCGAACGTCGCTGTGGCCGCTTCTGCCTC
CGCTGCGGCTGCAATCGAAGCGGGTGTCGTACCTCCAGCCGCTTGGGTTG
GCATCTCGAATGAGCGCCCTCCAAGGTTCGTATCAGTCGGCACTCTGTGT
CCTCGGAAGGGCCAACTTGGGCTTATCGCCGCTCTCAGGGCCGCCTGCGC
CTCGCAACCGAAGCAACTAGGCGGCTCCGTGCTCACGCTCATAGGCGGCG
AGGGGACCGATCCCGCCTACGCTCGGGCCGTCAGGGCGGCGGCGGCAACC
GCCGAGGTCGGCGATGAGAGTAGAGGGAGCGCCAAAGGAGAAGGACCGGG
GCGGTTGGAGGTGCGGCTTCTAGGACCCTTACCGAGGGAGGAGACCCTCG
AGCACGTGGGCGCGAGCGACGCCTTCTTGTTGAACTCCTTCTCCGAGAGC
TGGGCCGTGGCCCCGGTAGAAGCGGCCCTGCGCGGGGTGCCGGTGCTCTC
CACGCGGGTCGGTTGGTTGGCTCAGTCGTTACCCGCCGAGTCGACTATAT
GGGTTGGTTCGGGCCGGACCGGGCGAGGACATGATGCCAACGGCGGCGGC
GGTATCGTCGCCGGTGGCGACGGGGCCGGGCATGCGTCGGCGGCCGAGTG
GGGACACGCGCTTCTCAGGTTTGCGCACGCCCGGCAGCGATTGAGAATCG
AGGCGGAGCGTGCCGTGCCGGGCCTCGCTGAGAGGTTCTGCCGAGTGGTG
GCGGCGGACGCGCGAGGCCAAGCCGTCCGGACTCTCATGGAAACGACAAC
GGGGAGAAGAAGCACCAGCCGCTCTCGTCTCCCCGGGGGATATGAGCTGT
TGAGCGCACCTGCTGATCGTTCGACCACCACCACTTCAGTCACCGCCGCC
GCCGCCGGAATCACTGATCAAGAGCGGGTGAGAAAGGCCACAGTGAACAA
CGCCCTCGCTTGTGTGTGCGCGACCTGTGTCTCGATCAGCGGCGTGGGTG
GCGCGGTGGCAGGCCTTGCGTCCTTGGTCGCTGCGCAGTGCCTGCTGCTT
GTCGGACTGGCCCCGCCTTGCTCGCCGGCGAACCTCGTCACCATTTTTCG
GAGCTTTATCCCGCCGGCGGTGGTGTGGTTCAAGGCTGGGTCGGATTTCG
GCCAGGTGTCTATGGCTGACGTAACTGTCTTTGGAGTGCTTTTCGTGCTG
CTTGACGTGGTGGACGGTATCCTGGCGCGGCGATCGAAAACCGGTCCCAC
GCGCGTCGGAGCGGCGCTCGACGTTGAAAGCGATTCCATCGCCGTGCTGT
TCCTGAGCCTTGCAGCTAGCCGGAAGGCGTGGCGTGGGGGATTTGTCGCT
GGCGTCCTCCGGTACCTCTTTGTATTGGCTACCAACGCTCGCGAGCTCCC
GCCGTCGCCCATAGGCCCTGCCGGGCGGTGGGTCGCCAAAATCGCCGCTC
TTGCTAGCGTCGCCGCTCTTGCGGCTTCCGTCGGTAACGGCACCCTGAGT
AACGGCGGCGGGGGCGGCGGCGGGGATGCCGACACGGCGGTGTTTGAGGG
AACCGGAGGGGAGGGCGGGTGGGTGCGGGGCGGGGCGGAGGGTTCGTCCC
CTTTGCTGTGCGCGGCCGGAGTGGCCGTGCTGTGCGCGTCATTTTCGATC
GACTTCTTTCAGATTTGGGTCCTGTTGCCGCGGGAGGAGGCGGCAGCAGC
GGCGGCGGCGGCGGCAGCGAGTGCGGTCACGAATGAAACCGTCGGAAACG
GCAGCGTCCTTGGCGGGGCGGACGAGGCCCCTTCGACCAAGGCGATCGCC
GCCGTCGGCGAGAAGGGGGCGGGGAGGGAGCGCGCCAGCAAGAACGGCCT
CTGCAACATAACGGCGGCGAGGTATGCCGCCGACGAGACTGCACCTAGTC
ACGGCTAG
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