mRNA_E_fasciculatus_S2_contig7226.15405.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z8_ECTSI) HSP 1 Score: 195 bits (496), Expect = 1.250e-58 Identity = 114/197 (57.87%), Postives = 131/197 (66.50%), Query Frame = -1
Query: 1 DLVGSFLGTTPLLTAAANNHLGVVEKLLAAGAGRQRCRPNLDDWAAFRVAAKNGHATILKAFLATGTQMVAANGNRWTALHSAASGKGSLDNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIGAAGH 591
D GSFLGTTPL+ ++ L AGA +R P L + F +AA+ GHA ILKAFL TGT++VAA+GN WTALH AASG SLDN +RVLLEAG VNAKA S YTPLH+ V +R+AS+G + A AR ERDQTPLHVA RS VAAVELLLR G DE LTND+ DTPAD IGAA H
Sbjct: 74 DRAGSFLGTTPLVQRGRKQPPRCRQEALTAGADSRR--PTLGHYFPFDIAARRGHANILKAFLETGTEVVAADGNGWTALHGAASGIPSLDNRGTIRVLLEAGVNVNAKATCRS--LYTPLHLTVDYRVASVGMVGALLEGGADVNARAERDQTPLHVAGGRSNVAAVELLLRCGVDEKLTNDDGDTPADVIGAADH 266
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 122 bits (307), Expect = 9.780e-31 Identity = 78/159 (49.06%), Postives = 93/159 (58.49%), Query Frame = -1
Query: 16 RCRPNLDDWAAFRVAAKNGHATILKAFL-ATGTQMVAANGNRWTALHSAASGKGSL-DNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTI 486
RC P +AA GHA +LKA L +Q+ +G W ALH AA G + DNG AVRVLL AGA VN +D+ +TPLH+AV R S GT+RA AR DQTPLH+AC+ + V VELLLRWGADE LTN+ TPAD I
Sbjct: 83 RCSP-------LEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNN--NDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVI 232
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Pfs, (NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.030e-27 Identity = 86/146 (58.90%), Postives = 97/146 (66.44%), Query Frame = -1
Query: 4 GHATILKAFLATGTQMV-AANGNRWTALHSAASGKGSL-DNGAAVRVLLEAGAYVNAKAKT-PSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIGAAG 432
G+A +LKAFL ++ V A +G WTALH AA S+ DNG AVR LLEAGA VN K SD+ +TPLHVAV R+ASI I XXXXXXXXX +QTPLHVAC V+ VELLLRWGADE L N DTPAD IG G
Sbjct: 256 GNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGVWG 401
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.860e-27 Identity = 69/118 (58.47%), Postives = 77/118 (65.25%), Query Frame = -1
Query: 13 WTALHSAASGKGSLDNGAAVRVLLEAGAYVNAKAKTPSDN-RYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIG 363
+TA+H A + G LDNGA VR+LLEAG VNA+ T D R+TPLH AV RIASI T A A G+ TPLHVAC S VAAVELLLRWGADET +ND D PAD IG
Sbjct: 277 YTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAE--TGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIG 392
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: MHC_I (C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 114 bits (286), Expect = 3.070e-26 Identity = 78/145 (53.79%), Postives = 89/145 (61.38%), Query Frame = -1
Query: 4 TILKAFLATGTQMVAANGNR-WTALHSAA----SGKGSLDNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIGAAG 423
TI+KAFL T T +V A + +TALH AA G+ D G AVRVLL AGA V+AK T R PLH+AV R+ S GTIRA R D+TPLH AC S VAAVELLLRWGADE LT+D TPAD IG +G
Sbjct: 257 TIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGR---DKGDAVRVLLAAGADVHAKT-TDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSG 397
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.060e-25 Identity = 67/117 (57.26%), Postives = 77/117 (65.81%), Query Frame = -1
Query: 10 ALHSAASGKGSL-DNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIGA 357
ALH AAS G + D G AVRVLL AG VN T +D+ +TPLHVAV RIAS GTIRA +R DQTPLH+AC+ + V+ VELLLRWGADE LTN+ D PAD I A
Sbjct: 45 ALHYAASVVGPVHDKGDAVRVLLGAGVDVNVN--TTTDSCFTPLHVAVDGRIASDGTIRALLEGADVD-SRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRA 158
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Ankyrin (repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.730e-25 Identity = 75/160 (46.88%), Postives = 91/160 (56.88%), Query Frame = -1
Query: 13 RCRPNLDDWAAFRVAAKNGHATILKAFL-ATGTQMVAANGNRWTALHSAASGKGSL-DNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIG 486
RC P +AA GHA +LKA L +++ AN W ALH AS ++ D G AVRVLL AGA VN K +D+ TPLH+AV + S GTI A AR D TPLH+AC R + VELLLRWGADE L N++ DTPAD +G
Sbjct: 245 RCSP-------LEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGT--NDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVG 395
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 103 bits (256), Expect = 2.220e-23 Identity = 61/103 (59.22%), Postives = 65/103 (63.11%), Query Frame = -1
Query: 16 LDNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTI 324
LDNG VRVLLEAGA V+AK T N TPLH AV RIA IG IRA AR DQTPLHVAC RS V VE LL WGADE LT+ + +TPA I
Sbjct: 35 LDNGDTVRVLLEAGADVDAKT-TGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAI 136
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.480e-22 Identity = 90/184 (48.91%), Postives = 101/184 (54.89%), Query Frame = -1
Query: 10 LTAAANNHLGVVEKLLAAGAG-RQRCRPNLDDWAAFRVAAKNGHATILKAFLATGTQMVAANGNRWTALHSAASGKGSL-DNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIGA 555
L ANNHL V++LLAAGA RC ++ +AA GHA +L A L + A S G + DNG AVR LL GA VNAK T +PLH+AV RIAS G I XXXXXXXXX D PLH+ACR S V VELLLRWGADE LTN TPAD I A
Sbjct: 188 LLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAK--TTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRA 357
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.710e-21 Identity = 70/127 (55.12%), Postives = 78/127 (61.42%), Query Frame = -1
Query: 13 VAANGNRWT--ALHSAASGKGSL-DNGAAVRVLLEAGAYVNAKAKTPSDNRYTPLHVAVGFRIASIGTIRAXXXXXXXXXARGERDQTPLHVACRRSGVAAVELLLRWGADETLTNDERDTPADTIG 384
VAANG ALH AA ++ DNG AVR LL AGA VN +A ++ +TPLH+A RIAS GTIRA A E D+TPLH AC VA VELLL WGADE LTND DTPAD IG
Sbjct: 170 VAANGGHGNVAALHCAAVFVVAVRDNGDAVRALLGAGADVNVEAT--NNICFTPLHLAACHRIASDGTIRALLEGGANINACTE-DETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADVIG 293 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7226.15405.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7226.15405.1 >prot_E_fasciculatus_S2_contig7226.15405.1 ID=prot_E_fasciculatus_S2_contig7226.15405.1|Name=mRNA_E_fasciculatus_S2_contig7226.15405.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=118bp MTCCSYRVCGRISFVVRERFICPPPQQKLYSRHTRTPASYVQWCLVAFTAback to top mRNA from alignment at E_fasciculatus_S2_contig7226:3659..4252+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7226.15405.1 ID=mRNA_E_fasciculatus_S2_contig7226.15405.1|Name=mRNA_E_fasciculatus_S2_contig7226.15405.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=594bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7226:3659..4252+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7226:3659..4252+ >mRNA_E_fasciculatus_S2_contig7226.15405.1 ID=mRNA_E_fasciculatus_S2_contig7226.15405.1|Name=mRNA_E_fasciculatus_S2_contig7226.15405.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=354bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7226:3659..4252+ (Ectocarpus fasciculatus EfasUO2)back to top |