mRNA_E_fasciculatus_S2_contig7053.15217.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Similar (to Gram-negative bacteria-binding protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS2_ECTSI) HSP 1 Score: 295 bits (754), Expect = 9.080e-98 Identity = 186/246 (75.61%), Postives = 201/246 (81.71%), Query Frame = 1
Query: 1 QGEGLTNGQQ-ARNLKKMKT-KKVKAKASTDHEYLGCYRYNKDIGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMFEYQEVESSSTTTGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTAEYDDDEGYGSSIE-SVCSNGVPGIESNGVCCETSCXXXXGAGCSSVGNGAESCCTSTILEFGEVCGSAPCVI 729
QGEG+ NGQQ AR+LK+MK KKVKA+ASTDHEYLGCYRYNK+ G LLK+GKSFFD TDQALCRAHCEEYDTAFYA+E GD CWCPTSPDINDYIIDE G CDKPCTGDPSIFCGG SISMFEYQ+V+SS T+TG XXXXXXXXXXXXXXXXXXXXXXXXXXX G+ SS E SVC+NGV GIES+GVCCE SC G+GCS GNGA SCCTSTILE GEVCG APC+I
Sbjct: 15 QGEGVRNGQQGARSLKRMKREKKVKARASTDHEYLGCYRYNKENGMLLKNGKSFFDKTDQALCRAHCEEYDTAFYALEDGDVCWCPTSPDINDYIIDEVGICDKPCTGDPSIFCGGVSSISMFEYQDVDSS-TSTGEYEEDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XGFSSSTEESVCTNGVSGIESDGVCCEISCGQCGGSGCSMRGNGAASCCTSTILEVGEVCGVAPCII 256
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 254 bits (649), Expect = 7.080e-78 Identity = 138/205 (67.32%), Postives = 153/205 (74.63%), Query Frame = 1
Query: 1 QGEGLTNGQQ-ARNLKKMKT-KKVKAKASTDHEYLGCYRYNKDIGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMFEYQEVESSSTTTGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTAEYDDDEGYGSSIESVCSNGVPGIESNGVCCE 609
QGEGL NGQQ ARN ++MK KKV+AKASTDHEYLGCYRYNKDI LLK+GKSF+D TDQALCRAHCEEYDTAFYAME+GD CWCPTSPDINDYIID+ G+CDKPCTGDPSIFCGG +SISMFEYQ+V SST TG XXXXX + DD+G+ SS ESVC+NGV GIES+GVCCE
Sbjct: 50 QGEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNGKSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGNCDKPCTGDPSIFCGGVFSISMFEYQDV-GSSTGTGEYEEYEXXXXX--------------------------VQEXDDDGFSSSTESVCTNGVSGIESDGVCCE 227
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP22_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 1.110e-9 Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 559 VCSNGVPGIESNGVCCETSCXXXXGAGCSSVGNGAESCCTSTILEFGEVC---GSAPCVI 729
CSNG+ G E +G CC C G GCS +G GAESCCTS I+ GE C G+APC++
Sbjct: 399 TCSNGLAGYEKSGACCSVGCGTCGGEGCSQLGQGAESCCTSNIIAAGEPCSEKGAAPCIM 458
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 3.940e-9 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 532 EGYGSSIESVCSNGVPGIESNGVCCETSCXXXXGAGCSSVGNGAESCCTSTILEFGEVC---GSAPCVI 729
EGY + CSNG+ G E++G CC C G GCS +G GAESCCTS I+ E C G+APC++
Sbjct: 373 EGY--TCAQTCSNGLAGYENSGACCSVGCGTCGGEGCSQLGEGAESCCTSNIIAAREPCSEKGAAPCIM 439
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 7.450e-8 Identity = 36/100 (36.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 85 DHEYLGCYRYNKDIGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMFEYQEVES 384
D YLGCY D + + DMT + C +C Y +Y +Y CWC D DY + G+CD C+GD S CGG YS+S++E +V++
Sbjct: 238 DPSYLGCYADPAD-SRIFDLVATADDMTSEN-CLGNCGAYQ--YYGTQYSTQCWCG---DNADYDANGAGECDMACSGDSSEICGGFYSMSVYENDDVDA 330
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 1.810e-7 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 559 VCSNGVPGIESNGVCCETSCXXXXGAGCSSVGNG--AESCCTSTILEFGEVCG---SAPCVI 729
VCSNG+PGI+++ CC C G+GC G G A++CC S I+E+GE+C APC I
Sbjct: 1082 VCSNGIPGIQTDNACCLAECGACGGSGCDEFGGGLGADNCCVSDIVEYGELCSIALEAPCYI 1143
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: kremen (protein 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF47F) HSP 1 Score: 58.2 bits (139), Expect = 4.880e-7 Identity = 32/100 (32.00%), Postives = 48/100 (48.00%), Query Frame = 1
Query: 73 KASTDHEYLGCYRYNKD--IGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMFE 366
K + + +YLGCY D + G H S T C C E F + +YG C+C + Y + +C+KPC GDP+ CGGT+ S+++
Sbjct: 60 KCTINFKYLGCYEDRSDRILYGRSMHSSSLTTET----CLTFCFESGFKFASTQYGSHCFCGNV--LRGYPEKAESECNKPCAGDPTEMCGGTWRGSIYK 153
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3KZP9_9AGAM) HSP 1 Score: 58.2 bits (139), Expect = 1.410e-6 Identity = 30/100 (30.00%), Postives = 45/100 (45.00%), Query Frame = 1
Query: 97 LGCYRYNKDIGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMFEYQEVESSSTT 396
LGCY L S C+A+C + +EYG C+C + + + C+K C DPS +CGGT+++++F Y V SS T
Sbjct: 30 LGCYTDQNSPRTLSGASYSSTVTMTYDTCKAYCLGKGYNYAGVEYGSQCYCGNALNSPGKLAASQTSCNKACASDPSNYCGGTWTLTVFYYNGVAGSSAT 129
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: xylosyltransferase (oxt-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F3AAC) HSP 1 Score: 57.8 bits (138), Expect = 1.770e-6 Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 82 TDHEYLGCYRYNKDIGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMF 363
T EYLGC++ +L H S +T Q +C A+C A + G+ C+C S +I D++ +C +PC G+ ++ CGGT+ S++
Sbjct: 130 TCKEYLGCFK--DSAARILPHPYSSQSLT-QEVCTAYCTTEGYALAGTQSGNQCFCGNSIPTG-HIRDDENNCQRPCAGNTTLICGGTWYSSVY 219
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Pseudoalteromonas amylolytica TaxID=1859457 RepID=A0A1S1MWX8_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 2.510e-6 Identity = 29/96 (30.21%), Postives = 50/96 (52.08%), Query Frame = 1
Query: 76 ASTDHEYLGCYRYNKDIGGLLKHGKSFFDMTDQALCRAHCEEYDTAFYAMEYGDTCWCPTSPDINDYIIDEDGDCDKPCTGDPSIFCGGTYSISMF 363
A + H Y+GC+ N ++G L +T + C+A C + + ++YG C+C + +Y D DC+ PCTG+ + FCGG + S++
Sbjct: 29 AQSQH-YIGCFTDNIELGRDLPVRAGLTTVTIDS-CKAACNKASYKYAGLQYGSLCFC--GHNYGNYSQVPDSDCNMPCTGNSTQFCGGLWRNSIY 120 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7053.15217.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7053.15217.1 >prot_E_fasciculatus_S2_contig7053.15217.1 ID=prot_E_fasciculatus_S2_contig7053.15217.1|Name=mRNA_E_fasciculatus_S2_contig7053.15217.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=244bp QGEGLTNGQQARNLKKMKTKKVKAKASTDHEYLGCYRYNKDIGGLLKHGKback to top mRNA from alignment at E_fasciculatus_S2_contig7053:2389..4918+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7053.15217.1 ID=mRNA_E_fasciculatus_S2_contig7053.15217.1|Name=mRNA_E_fasciculatus_S2_contig7053.15217.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2530bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7053:2389..4918+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7053:2389..4918+ >mRNA_E_fasciculatus_S2_contig7053.15217.1 ID=mRNA_E_fasciculatus_S2_contig7053.15217.1|Name=mRNA_E_fasciculatus_S2_contig7053.15217.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=732bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7053:2389..4918+ (Ectocarpus fasciculatus EfasUO2)back to top |