mRNA_E_fasciculatus_S2_contig6910.15048.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Villin (villin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI9_ECTSI) HSP 1 Score: 213 bits (542), Expect = 5.060e-63 Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEV CSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDD+PENAEF
Sbjct: 73 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVACSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEF 178
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB93_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.430e-39 Identity = 66/106 (62.26%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
G+EYLPGGV+SGFNK+E+DV+ TRLLH+KGKR VRVSEVP S SLN+GDVFILDAGLK+YL++GP +N YEK+KGVQ I + +R RA + + + P++ EF
Sbjct: 69 GIEYLPGGVESGFNKVERDVYPTRLLHLKGKRTVRVSEVPLSRSSLNHGDVFILDAGLKIYLFNGPTSNNYEKAKGVQVASNINNDERGARAEIILVHENPKDEEF 174
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BE30_9BACT) HSP 1 Score: 140 bits (353), Expect = 1.800e-37 Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
GV+YLPGGV+SGF K+EKDV+ TRLLH KGKR VRVS V S SLN GDVFILD GLK++L++GP AN +EK+KG++ RI +R GRA + FLD +P NA+F
Sbjct: 70 GVQYLPGGVESGFRKVEKDVYETRLLHCKGKRTVRVSSVAVSKASLNRGDVFILDQGLKIFLFNGPGANKFEKAKGLEVASRINSDERGGRAELVFLDSDPRNADF 175
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBD4_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.350e-36 Identity = 63/106 (59.43%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
G+EYLPGGVDSGFNK+E+DV+RTRLLH KGKR VR +E P + SLN GDVFILD GL+LYL++G ++N YEK+KG + +Q+I + +R R +TF+D++P N F
Sbjct: 110 GIEYLPGGVDSGFNKVERDVYRTRLLHCKGKRAVRCTERPVESGSLNKGDVFILDMGLELYLYNGCNSNKYEKTKGAEMVQKINN-ERGARCNITFIDEDPHNGAF 214
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Villin (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP2_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.910e-35 Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
G+EYL GGV SGF K+E+D +RTRLL VKG+RV RV EVP S SLN GDVFILDAGL LYL++G A+ EKSKGV+++ RIKD +R GRA + F+ ++P NAEF
Sbjct: 114 GIEYLMGGVASGFRKVERDAYRTRLLQVKGRRVARVIEVPLSGSSLNTGDVFILDAGLTLYLYNGAGASRAEKSKGVETITRIKDDERGGRAQVVFIHEDPTNAEF 219
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPG3_9STRA) HSP 1 Score: 136 bits (342), Expect = 5.020e-35 Identity = 63/106 (59.43%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
G+EYLPGGVDSGFNK+E+DV+RTRLLH KGKR VR +E P + SLN GDVFILD GL+LYL++G ++N YEK+KG + +Q+I + +R R +TF+D++P N F
Sbjct: 110 GIEYLPGGVDSGFNKVERDVYRTRLLHCKGKRAVRCTERPVESGSLNKGDVFILDMGLELYLYNGCNSNKYEKTKGAEMVQKINN-ERGARCNITFIDEDPHNGAF 214
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Villin-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA3_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.300e-34 Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
GVEYLPGGV SGF K+E D +RTRLL VKGKRV R+SEVP ++ SLN GDVF+LDAGL LY++ G A+ EK+KGV++ RIKD +R G+A + + ++PEN EF
Sbjct: 108 GVEYLPGGVASGFVKVEPDTYRTRLLRVKGKRVARISEVPVASSSLNTGDVFVLDAGLALYVYVGAGASSAEKAKGVETAARIKDDERQGQAKVVLISEDPENKEF 213
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Gel (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812THK7_SYMMI) HSP 1 Score: 128 bits (321), Expect = 1.260e-33 Identity = 59/106 (55.66%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDEPENAEF 318
G+EYLPGGV+SGF +++D + TRLL VKGKR VRV EVP S SLN GDVFILD GLK+++++G AN +EK+KG+ +I++ +R GRA + LD++P N+EF
Sbjct: 72 GLEYLPGGVESGFRHVDRDSYTTRLLMVKGKRTVRVREVPLSNASLNTGDVFILDTGLKIFVYNGATANRHEKAKGIDVANKIRNEERGGRAEIFMLDEDPNNSEF 177
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: HP (domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZKU3_LOTGI) HSP 1 Score: 127 bits (320), Expect = 4.690e-32 Identity = 55/99 (55.56%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDD 297
G++YL GG++SGF K+E+DV+ TRLLH+KG+R VRV +V C SLN GDVFILDAGL +Y+W+GP ++M EK KG + +RIKD +R G+A + +D+
Sbjct: 114 GIKYLEGGIESGFKKVERDVYETRLLHIKGRRNVRVRQVKCDVSSLNQGDVFILDAGLTIYIWNGPSSSMMEKIKGAEVAKRIKDEERGGKAQIYIIDE 212
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZQB6_9EUPU) HSP 1 Score: 118 bits (295), Expect = 1.790e-31 Identity = 52/99 (52.53%), Postives = 72/99 (72.73%), Query Frame = 1
Query: 1 GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDD 297
G++YL GGV+SGF K+E+ + TRL+HVKGK+ VRV +V C SLN GDVFILD GL +++W GPD++ E+ K + +RIKD +R G+A + LDD
Sbjct: 77 GIKYLEGGVESGFRKVERGKYETRLMHVKGKKNVRVKQVKCDVSSLNQGDVFILDCGLTIFVWIGPDSSNMERIKATEVARRIKDEERGGKAVVNILDD 175 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6910.15048.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6910.15048.1 >prot_E_fasciculatus_S2_contig6910.15048.1 ID=prot_E_fasciculatus_S2_contig6910.15048.1|Name=mRNA_E_fasciculatus_S2_contig6910.15048.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=106bp GVEYLPGGVDSGFNKMEKDVFRTRLLHVKGKRVVRVSEVPCSTDSLNNGDback to top mRNA from alignment at E_fasciculatus_S2_contig6910:430..2254- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6910.15048.1 ID=mRNA_E_fasciculatus_S2_contig6910.15048.1|Name=mRNA_E_fasciculatus_S2_contig6910.15048.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1825bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6910:430..2254- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6910:430..2254- >mRNA_E_fasciculatus_S2_contig6910.15048.1 ID=mRNA_E_fasciculatus_S2_contig6910.15048.1|Name=mRNA_E_fasciculatus_S2_contig6910.15048.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=318bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6910:430..2254- (Ectocarpus fasciculatus EfasUO2)back to top |