prot_D-mesarthrocarpus_Contig1001.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1001.2.1
Unique Nameprot_D-mesarthrocarpus_Contig1001.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length250
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1001.2.1 vs. uniprot
Match: D7FUM4_ECTSI (HTH_OrfB_IS605 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM4_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.250e-54
Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 0 
Query:   88 GHRTIELLPTDEQRQTLQKWFGVVRWTHNRAVDALRRDPEASKSSLWAAVAAAESDHSWVSAVPRAVRDDTVGELWAT-----------AAACGRV----------NEDALKYRTRKDRLEKVIIRASGFLGGVPYPEYFGRTPLAASELLPDRLPGDAILVRNCERFFLCV 238
            G++T+ELLPT +QRQTLQKWFGVVRW HNRAVDALR D   S +SL AAVA +ES+H W +AVP A+RD TV +L              AAA G               ALKYRTRKDRLE++++RA GF  G+PYP+YFG  PLA+S  +PDRLP DAILVR+ ERF+LC+
Sbjct:  226 GYQTLELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVDSSVSATSLRAAVAESESEHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGEAVMAEPLGTAAQNKALKYRTRKDRLEQIVLRADGFQYGIPYPDYFGYAPLASSVPIPDRLPSDAILVRSTERFYLCI 397
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1001.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUM4_ECTSI1.250e-5456.98HTH_OrfB_IS605 domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021027Transposase, putative, helix-turn-helix domainPFAMPF12323HTH_OrfB_IS605coord: 91..120
e-value: 8.7E-8
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1001contigD-mesarthrocarpus_Contig1001:14674..16141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1001.2.1mRNA_D-mesarthrocarpus_Contig1001.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1001 13089..16335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1001.2.1 ID=prot_D-mesarthrocarpus_Contig1001.2.1|Name=mRNA_D-mesarthrocarpus_Contig1001.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=250bp
MSHSGLMDFWSEPWTFETWSLWSSQGAASAGLSILNWKKGESSPWSSSTW
APPQGAAPLRETLRASNGGRQGARHPFGRECQIAPSTGHRTIELLPTDEQ
RQTLQKWFGVVRWTHNRAVDALRRDPEASKSSLWAAVAAAESDHSWVSAV
PRAVRDDTVGELWATAAACGRVNEDALKYRTRKDRLEKVIIRASGFLGGV
PYPEYFGRTPLAASELLPDRLPGDAILVRNCERFFLCVPNSWKDSPWLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021027Transposase_put_HTH