prot_D-mesarthrocarpus_Contig10009.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10009.3.1
Unique Nameprot_D-mesarthrocarpus_Contig10009.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length48
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 6.670e-17
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 0
Query:    2 AGGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDV 40
            AG QQT++RVIVTGLPPSASWQDLKDHMRKAG+PTYTDV
Sbjct:  110 AGFQQTEYRVIVTGLPPSASWQDLKDHMRKAGEPTYTDV 148          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.920e-16
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MAGGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDV 40
            M GG+QT+ RVIVTGLPPSASWQDLKDHMRKAGD  YTDV
Sbjct:   95 MGGGRQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDV 134          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.010e-15
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MAGGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDV 40
            M GG+QT+ RVIVTGLPPSASWQDLKDHMRKAGD  YTDV
Sbjct:  114 MGGGRQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDV 153          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: A0A2A6CR05_PRIPA (Rsp-3 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6CR05_PRIPA)

HSP 1 Score: 72.8 bits (177), Expect = 3.900e-14
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    3 GGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDV 40
            GG++T HRVIVTGLPP+ SWQDLKDHMR+AGD  YTDV
Sbjct:  123 GGRRTSHRVIVTGLPPTGSWQDLKDHMREAGDVCYTDV 160          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.980e-13
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    3 GGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDV 40
            GG+QT++R +VTGLP SASWQDLKDHMRKAGD  Y DV
Sbjct:  188 GGRQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADV 225          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: A0A821HWE8_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821HWE8_9NEOB)

HSP 1 Score: 66.2 bits (160), Expect = 1.020e-12
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    6 QTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDV 40
            QT++RV+V+GLPPS SWQDLKDHMRKAGD  Y DV
Sbjct:   68 QTEYRVLVSGLPPSGSWQDLKDHMRKAGDVCYADV 102          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: A0A0N5AVR9_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AVR9_9BILA)

HSP 1 Score: 68.2 bits (165), Expect = 1.440e-12
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    3 GGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDVV 41
            G ++T++RVI+TGLPPS SWQDLKDHMR+AGD  Y+DV 
Sbjct:  112 GSRRTNYRVIITGLPPSGSWQDLKDHMREAGDVCYSDVT 150          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: A0A7S0RPW5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RPW5_9CHLO)

HSP 1 Score: 67.8 bits (164), Expect = 1.540e-12
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    5 QQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDVV 41
            ++TD+RVIVTGLP SASWQDLKDHMRKAGD T+T V+
Sbjct:  110 RRTDYRVIVTGLPLSASWQDLKDHMRKAGDVTFTQVM 146          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: F1KVJ6_ASCSU (Serine/arginine-rich splicing factor 1 n=2 Tax=Ascaris suum TaxID=6253 RepID=F1KVJ6_ASCSU)

HSP 1 Score: 67.4 bits (163), Expect = 2.640e-12
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    2 AGGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDVV 41
            +GG++T++RVIVTGLP S SWQDLKDHMR+AGD  Y D+ 
Sbjct:  115 SGGRRTNYRVIVTGLPTSGSWQDLKDHMREAGDVCYADIT 154          
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Match: UPI0009A265F1 (serine/arginine-rich splicing factor 1-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A265F1)

HSP 1 Score: 66.2 bits (160), Expect = 3.340e-12
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 QQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDVVG 42
            +++D RVIV+GLPPS SWQDLKDHMR+AGD  Y DV+G
Sbjct:  110 RRSDFRVIVSGLPPSGSWQDLKDHMREAGDVCYADVLG 147          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10009.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB97_ECTSI6.670e-1789.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQ88_9STRA5.920e-1685.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CC30_9STRA1.010e-1585.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2A6CR05_PRIPA3.900e-1478.95Rsp-3 n=2 Tax=Pristionchus pacificus TaxID=54126 R... [more]
D8LPT5_ECTSI3.980e-1376.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A821HWE8_9NEOB1.020e-1277.14(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
A0A0N5AVR9_9BILA1.440e-1269.23Uncharacterized protein n=1 Tax=Syphacia muris Tax... [more]
A0A7S0RPW5_9CHLO1.540e-1278.38Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
F1KVJ6_ASCSU2.640e-1267.50Serine/arginine-rich splicing factor 1 n=2 Tax=Asc... [more]
UPI0009A265F13.340e-1271.05serine/arginine-rich splicing factor 1-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 8..46
e-value: 6.8E-11
score: 43.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 11..41
e-value: 2.0E-4
score: 21.2
NoneNo IPR availablePANTHERPTHR23147:SF198PRE-MRNA-SPLICING FACTOR SF2-LIKE PROTEINcoord: 5..40
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 5..40
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10009contigD-mesarthrocarpus_Contig10009:4058..4201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10009.3.1mRNA_D-mesarthrocarpus_Contig10009.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10009 4058..4201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10009.3.1 ID=prot_D-mesarthrocarpus_Contig10009.3.1|Name=mRNA_D-mesarthrocarpus_Contig10009.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=48bp
MAGGQQTDHRVIVTGLPPSASWQDLKDHMRKAGDPTYTDVVGLNSWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf