Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1036.1.1 vs. uniprot
Match:
D7G7C4_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C4_ECTSI)
HSP 1 Score: 136 bits (343), Expect = 2.920e-31
Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 517 ELKL-PSGPSLSLRMKKTTAYTPSPASEFKARERQEPADLPHCSVCATPFALLVRRQRCQVCGESVCAQCSLDRRYVEGQKGLQRVCDICIVEGPIVFSGAGDEESLSAGS 846
+LKL PSG S +LR+KK +TPSP SEFK+RERQ+ D P C VCA PF L++RRQRC VC +SVCA CS D+R+VEGQKGLQRVCDICIVEGP+V DE + A S
Sbjct: 46 DLKLRPSGTSRTLRLKKQAQFTPSP-SEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCADSVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVL----DENGMYAAS 151
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1036.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 2.92e-31 / Id = 63.96 Sequence D7G7C4_ECTSI
Match Name E-value Identity Description
D7G7C4_ECTSI 2.920e-31 63.96 FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Seed ortholog 157072.XP_008869772.1 PFAMs FYVE Model size 1230 Max annot lvl 2759|Eukaryota Hectar predicted targeting category other localisation Exons 4 Evalue 9.54e-07 EggNOG OGs KOG1819@1|root,KOG1819@2759|Eukaryota Ec32 ortholog description Zinc finger, RING/FYVE/PHD-type Ec32 ortholog Ec-04_003330.1 Description negative regulation of epidermal growth factor-activated receptor activity Cds size 1227 COG category U
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789175.2672238-CDS-D-mesarthrocarpus_Contig1036:536..1015 1680789175.2672238-CDS-D-mesarthrocarpus_Contig1036:536..1015 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1036 537..1015 - 1680789175.278531-CDS-D-mesarthrocarpus_Contig1036:2600..2720 1680789175.278531-CDS-D-mesarthrocarpus_Contig1036:2600..2720 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1036 2601..2720 - 1680789175.2875612-CDS-D-mesarthrocarpus_Contig1036:3398..3681 1680789175.2875612-CDS-D-mesarthrocarpus_Contig1036:3398..3681 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1036 3399..3681 - 1680789175.2988982-CDS-D-mesarthrocarpus_Contig1036:3882..4227 1680789175.2988982-CDS-D-mesarthrocarpus_Contig1036:3882..4227 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1036 3883..4227 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1036.1.1
>prot_D-mesarthrocarpus_Contig1036.1.1 ID=prot_D-mesarthrocarpus_Contig1036.1.1|Name=mRNA_D-mesarthrocarpus_Contig1036.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=409bp
CPLNSQFQCKAYGTGTLFSTAAYIKRGVPGNNRGLDMGGFRKRAPKSPAI back to top mRNA from alignment at D-mesarthrocarpus_Contig1036:536..4227-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1036.1.1 ID=mRNA_D-mesarthrocarpus_Contig1036.1.1|Name=mRNA_D-mesarthrocarpus_Contig1036.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3692bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1036:536..4227- (Discosporangium mesarthrocarpum MT17_79)TGTCCTCTCAACTCTCAATTCCAGTGCAAGGCATACGGAACAGGAACGCT
GTTTTCGACAGCGGCATATATCAAGCGTGGTGTACCCGGGAATAACAGGG
GACTTGATATGGGAGGTTTCAGGAAGAGGGCTCCTAAGTCCCCGGCGATC
AAAGATGCAGGTGGCAAGTCTGGCGGAGGAGACAAGGGTAGGAAAAGTAA
GCCGAAGAACGAGACCAAAAAGGAGGATAATGCCAACGGCAAGGCGGACA
AGAAAACAAAGGATCGCGATGTCGTGGGTCGTGACAGCCCGGCTCGTCGG
CGAAGTCTGCTGGGGATTGCCTCTATGCGAGATGTATTCGAGCAG GTGTG
TAAAGAGATATGGCCGTAATGATGAACCCTCCACGTACTTCATACAGCCC
TGTATCCCCCCAGTGGGGCTGCACCGCCGCAAAGTTCACCCAATTCTTGC
AAAGCCAACAAACAGGTCGTCAAACCCTTACAAACCAACAAGCTTCTCAA
TATTTCCACTCGCTCCTCGTATTTTCGTGTGGGATCGCCATGGAAGGTGC
AAGACTCCCTCACAAAAAGCCGGCACGCCGACGGCTCTGGCGGAGCAAGA
TCACATGGGATCTCGTCATCACCCCAGCGAGGTCAGCCGGCAAGTCCGGG
GGCAACGGCCACAGAGGTGGGGACAGTGAATGGATGGATTTCTCCTCCCC
AGAAGAAGAAGGCGCTAGAGTTGAAACTGCCGTCAGGCCCTTCCCTCTCC
CTGAGGATGAAAAAGACGACGGCCTATACCCCGTCACCTGCCTCGGAGTT
TAAGGCCCGCGAGCGACAGGAACCTGCAG GTGTGTTGATTGGTCGAGTCT
GTGGCCGCTGCAGGAGTTCTCTCGTCCGGTCTTGCACAGTAGAGAGAACG
TTCTTATTCCATTGTCGCAGCTCTCTGAAGATTTGCCCAACCCGGAACGT
TTATGTTTTTTGTGTGCGGCAAGTACACTAGAGCAAGATTATTTGTCCTT
GCACTGCTTGTTTGGCGTTTTGAGGGAGGGTCGGTGTTAGTGTCTACGAT
CTGTCCGGAAATAGATGCAGTATTTTGAACTCGTATACGTTGCTTCGAAG
TACGTTTTTCCCCCCCACCACCTCGGTCGGGCATTTACTCTGAGATTGTC
AAGCCCTTCTCTGACTTTGGTTCATGCTCTACGCTCCATGCGTGATGTTT
TTTTTTTTTTGAAGGTTCGGTCTGAACGGGCAAAACCGGGTCTCATTTGC
GAAAATGATTCTCCTACGTGGCACGCACCATGCTCTACCCCTGTAAAACG
CACAGCGCTCTACCAAGTTCCCATACTCACGACCTTCATGTAGACTGTGT
ACCTGTGATGTGGGTGTGTGCTTTACCGAGGTCATAAGTCATTCCACTTG
TCCTCCCAACCCCAGGACAATTTCCTTAACCAAGAGCCCCGCTTCTCTCA
CCACTCCCTCCTCCCTCCCCTCCTCCCCTCCCCCGGTGCACATCCCTTAT
CCGCCAGACCTCCCCCATTGCAGTGTGTGCGCCACCCCCTTTGCCTTGCT
TGTGCGGCGCCAACGGTGTCAAGTCTGTGGGGAAAGCGTGTGTGCCCAGT
GCTCCCTTGACAGGCGTTATGTGGAAG GTTTGTTTGAAGCATGTGCCTGG
CAATTGAAGTCCTTTTCCATCCCATTCCATTTAACAAAAAAACTATTACG
AGATCTACACTAGGTGGTTAGCCCCTATATTCTTCCCTCTTGACACCTTC
CCGCATCTTGTTTCTAGTTTCTTTTTTTTTTTTCTCTTTCGTTCTGGTGT
GGCAGTACTCCCATTTAATCTATCACACCACCCTGTGCACCTACTGCAGG
ATAGATGAATGATTTGGTGCAGCCAGGTGTTGTGTAGTCAGGTGATGTTG
TTGATTGTGATTTACTGGTCTCATTGATGGCAACTGGATACCAATTAGCG
ACCGATGGTTTAGAGGGTTTAACGTACATGCCAACAGGACACATTTCATA
TTCTCATTTTTTTCCTTTTTGCACTTCACACTTCACAACTTCAGTTGAAC
AGTCACCTATCTTTGTACCTTGTAAGGGACCACCGTACACATGAGGGAGT
TACGCCTGCCATCTCAAATAGTGGGGTTATTTCAGCACCTTGTCAAGGTG
TTTTTTGCCTGCTGGAAAACCCATTGATCAACACCCCGCTGATCCTATCA
GCAAAAATGTTAGTGCTATTTCTTTATGCTGACTGTAACAATCACCCCTG
ATTCATGACCCTAAACACACCACATGCAGAGTCCTAGGTTGTTTACGCAA
ATCCCTTTGCAGCTGTTACCTTGTCCCAGGTAGTGTGGGCAAGGGTACCC
CTCATTATTAGGAAGCAACAGACACGTCAACAGAGTGGGCTCTTCTTCTC
AACAGATGTTTTCTATGCTTGCTGTTTTCTGTCTTACTGGCGTGTTTTCT
TTCTGCTGCCTTTTTCCGTGTGCTGCTTAGAAGAATTTGCATTATCCATA
GGCATATTCTCCATACTGCTTAAAGCTTACTGGATGATATCATCCGCATT
ATCCATAGGCATATTCTCCATACTGCTTAAAGCTTATTGGATGACATCAT
CCGCATTATCCATACTGCTTAAAGCTTGTTGGATGACATCCACCTTTGCA
GTCGGACCAGGCCACTCACTCATAGGGCACTTTGTGACCCTGCTGCTCCC
GGTGCTGTACACACCACTACACACACGACCGCCGGCCCTCAACCTCATCC
TAACCACAACTTCCATTTCATGTCTGGTTTCCCCGTCCCCCTACCAAAAA
AGATCCAAGAAAAAGGTCACTGGTCAGTCAATGTCCTTGCCTCCGCCCAA
TCGATATCTATCGCCACTCCACAAAATCCCATCCTATCCGATAAAATTCT
GCCTTTTTTATTTTTACCAAGTTTTGTACAATCATTTTATACTTCATATT
TCATTCTTCATTCTTCAATCTTTATACTTTCATCCTTTGTGGTTTTTTAA
TTGAATTAGTTATTGCGTGCTTGCCACAGAAGCTTGTACTGCACTAAGCA
TGACCGTAGTAACACGTCAAGATTGCAGCTCTTCTGTTGACAGCAGCTCT
TCTGTTGACAACATCTGTGATCCCTGCTATGTTGTTCTTATCTTCTTCCT
TCCTTCCTTCCTTCCTTTCCCTGTGCCTGATTACAATTGTGTCACCCCCC
TCCCCCCCACAGGTCAAAAGGGCCTGCAGCGGGTATGTGATATATGCATT
GTTGAAGGCCCCATTGTCTTCAGCGGTGCGGGAGACGAGGAGAGCTTATC
AGCTGGTAGCTTAACCGCCTCCTGGCTGTACCCCTCCCCCTCCCCGGCCC
ATGGCTCCCTCATGGCCTCATCCCCTGCGGCCTTCACTGCTGGGGTCACT
GCTGGGGCCGCTGCTCTGGGTGCCTCTCCTACCCTCCTCACCCCCGGCCA
CCCCTACCCCCACCCCCACCTCCGTGACAATGGCGCCAGTGGGGGCGATG
GTGGACCGCTGCTGGCACTGCCCCCCAAGGTCCTGGGGGACGGCTTGGGC
CCAGCTGATCCCACAGTGGGTCTTGGGAGAGGAGGCGGGAATGTCGTTGG
GGTAGAGGCATCAGCACATGGCCTTGGGATGGGAGCCGAGGCTGTGGCCG
GGCCCGGGTCCGGGCCCGGCCCCGGGGCAGGGGCATGGGCA back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1036:536..4227-
>mRNA_D-mesarthrocarpus_Contig1036.1.1 ID=mRNA_D-mesarthrocarpus_Contig1036.1.1|Name=mRNA_D-mesarthrocarpus_Contig1036.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1227bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1036:536..4227- (Discosporangium mesarthrocarpum MT17_79) back to top