mRNA_D-mesarthrocarpus_Contig10005.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-mesarthrocarpus_Contig10005.3.1
Unique Name	mRNA_D-mesarthrocarpus_Contig10005.3.1
Type	mRNA
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig10005.3.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig10005.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig10005	contig	D-mesarthrocarpus_Contig10005:4068..4412 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	81824.XP_001748305.1
Preferred name	PARP2
PFAMs	BRCT,PARP,PARP_reg,WGR,WWE
Model size	345
Max annot lvl	33154\|Opisthokonta
KEGG ko	ko:K10798
KEGG Pathway	ko03410,ko04210,ko04212,ko04214,ko04217,map03410,map04210,map04212,map04214,map04217
KEGG Module	M00296
Hectar predicted targeting category	other localisation
GOs	GO:0001558,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006284,GO:0006464,GO:0006471,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009987,GO:0010611,GO:0010613,GO:0010720,GO:0010941,GO:0012501,GO:0014742,GO:0014743,GO:0016070,GO:0016202,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0018193,GO:0018209,GO:0018312,GO:0019538,GO:0022616,GO:0023052,GO:0030307,GO:0031974,GO:0031981,GO:0033554,GO:0034641,GO:0034645,GO:0036211,GO:0040008,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043502,GO:0044057,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045844,GO:0045927,GO:0046483,GO:0046620,GO:0046622,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048634,GO:0048636,GO:0048638,GO:0048639,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051103,GO:0051128,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051239,GO:0051240,GO:0051716,GO:0055021,GO:0055023,GO:0055024,GO:0055025,GO:0060284,GO:0060420,GO:0060421,GO:0060548,GO:0061050,GO:0061051,GO:0065007,GO:0070013,GO:0070212,GO:0071704,GO:0090257,GO:0090304,GO:0097190,GO:0097191,GO:0140096,GO:0140097,GO:1901214,GO:1901215,GO:1901360,GO:1901564,GO:1901576,GO:1901861,GO:1901863,GO:1905207,GO:1905209,GO:1990404,GO:2000026,GO:2000725,GO:2000727
Exons	1
Evalue	2.8e-05
EggNOG OGs	KOG1037@1\|root,KOG1037@2759\|Eukaryota,38B7U@33154\|Opisthokonta
EC	2.4.2.30
Description	Poly (ADP-ribose) polymerase
Cds size	345
COG category	KLO
BRITE	ko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03400

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789146.4492795-CDS-D-mesarthrocarpus_Contig10005:4067..4412	1680789146.4492795-CDS-D-mesarthrocarpus_Contig10005:4067..4412	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig10005 4068..4412 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig10005.3.1	prot_D-mesarthrocarpus_Contig10005.3.1	Discosporangium mesarthrocarpum MT17_79	polypeptide	D-mesarthrocarpus_Contig10005 4068..4412 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-mesarthrocarpus_Contig10005:4068..4412-
coding sequence from alignment at D-mesarthrocarpus_Contig10005:4068..4412-

protein sequence of mRNA_D-mesarthrocarpus_Contig10005.3.1

>prot_D-mesarthrocarpus_Contig10005.3.1 ID=prot_D-mesarthrocarpus_Contig10005.3.1|Name=mRNA_D-mesarthrocarpus_Contig10005.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=115bp
HYAPGVIKGLPNIMFIKPHKVGSSSMSIVLRLIAARNNGVRREYMYTLSK
PDYFYALEELQPLEKGLHLWGDHQTLSTLLQYGKPEIIEDSFKITLVRDP
LDRCLSSFYYYVLGG

mRNA from alignment at D-mesarthrocarpus_Contig10005:4068..4412-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-mesarthrocarpus_Contig10005.3.1 ID=mRNA_D-mesarthrocarpus_Contig10005.3.1|Name=mRNA_D-mesarthrocarpus_Contig10005.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=345bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10005:4068..4412- (Discosporangium mesarthrocarpum MT17_79)
CACTATGCCCCGGGGGTAATCAAAGGGCTGCCCAACATCATGTTTATCAA
GCCACACAAGGTTGGGTCAAGCTCCATGTCCATTGTTTTGAGGCTCATCG
CGGCTCGGAATAATGGTGTTCGGAGGGAGTACATGTACACCCTGTCAAAG
CCAGACTACTTTTATGCATTGGAGGAGCTCCAGCCGCTGGAGAAGGGACT
CCACTTGTGGGGGGACCATCAAACCCTGTCGACTTTGCTACAGTATGGCA
AACCGGAGATCATTGAAGATTCCTTCAAGATCACTCTAGTGCGAGACCCA
CTGGATCGCTGCCTAAGCTCCTTCTACTACTATGTGCTGGGTGGC

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10005:4068..4412-

>mRNA_D-mesarthrocarpus_Contig10005.3.1 ID=mRNA_D-mesarthrocarpus_Contig10005.3.1|Name=mRNA_D-mesarthrocarpus_Contig10005.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=345bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10005:4068..4412- (Discosporangium mesarthrocarpum MT17_79)
CACTATGCCCCGGGGGTAATCAAAGGGCTGCCCAACATCATGTTTATCAA
GCCACACAAGGTTGGGTCAAGCTCCATGTCCATTGTTTTGAGGCTCATCG
CGGCTCGGAATAATGGTGTTCGGAGGGAGTACATGTACACCCTGTCAAAG
CCAGACTACTTTTATGCATTGGAGGAGCTCCAGCCGCTGGAGAAGGGACT
CCACTTGTGGGGGGACCATCAAACCCTGTCGACTTTGCTACAGTATGGCA
AACCGGAGATCATTGAAGATTCCTTCAAGATCACTCTAGTGCGAGACCCA
CTGGATCGCTGCCTAAGCTCCTTCTACTACTATGTGCTGGGTGGC