prot_D-mesarthrocarpus_Contig10003.1.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10003.1.2
Unique Nameprot_D-mesarthrocarpus_Contig10003.1.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length167
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: D7G5S1_ECTSI (Putaive LSm10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S1_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 6.780e-28
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 0
Query:   45 RAKRVPQLEKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMR--KKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTV 159
            R K+   LEKTLAIL+Q MRG+ +VVEMKND EI+G+LEETD++MK    +     L  S + P+   +M   ++T   G V+ M++  VQGKM+RYVHIPD VDAI  L KH+ T+
Sbjct:   12 RQKKTSPLEKTLAILIQSMRGNKIVVEMKNDAEISGILEETDRNMKAATVWLAAYGLTCSRAGPAPSLSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTM 128          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: A0A6H5JYY5_9PHAE (Sm domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY5_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 3.940e-13
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   72 MKNDVEITGVLEETDKDMKL-VIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTV 159
            MKND EI+G+LEETD++M L ++D                     ++T   G V+ M++  VQGKM+RYVHIPD VDAI  L KH+ T+
Sbjct:    1 MKNDAEISGILEETDRNMNLSMVDV--------------------RQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTM 69          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: UPI000E456FA5 (U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=UPI000E456FA5)

HSP 1 Score: 58.2 bits (139), Expect = 9.230e-8
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTVH 160
            E ++ +L+QG++G    V+++N        E T +   + +D F+ IRL          + +  + W +G +  ++  FV G+ VRYVHIPD VD +KT+H  ++ +H
Sbjct:   29 ENSMVLLLQGLQGEVTTVDLRN--------ESTAQGRVVNVDAFMNIRL----------EEVLYRDW-RGNLTQLQDLFVTGRNVRYVHIPDHVDIMKTMHNQLAKIH 117          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: A0A131X8Y5_9ACAR (Putative small nuclear ribonucleoprotein smd1 n=1 Tax=Hyalomma excavatum TaxID=257692 RepID=A0A131X8Y5_9ACAR)

HSP 1 Score: 55.8 bits (133), Expect = 6.590e-7
Identity = 31/101 (30.69%), Postives = 51/101 (50.50%), Query Frame = 0
Query:   52 LEKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTL 152
            + K+L +++Q +RG    +E++N++ I G +E  D  M + +               SD   +        G +T    FVQG+ VRYVHIPDD+D + +L
Sbjct:   10 ISKSLVLMLQSLRGRQTTIELRNELSIYGTVENVDAFMNVDL---------------SDATVVGPN-----GEETYASFFVQGRQVRYVHIPDDIDMVASL 90          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: A0A6I9PRP2_9TELE (U7 snRNA-associated Sm-like protein LSm10 n=3 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9PRP2_9TELE)

HSP 1 Score: 55.8 bits (133), Expect = 6.990e-7
Identity = 32/108 (29.63%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTVH 160
            E ++ +L+QG++G    VE++N+    G +          +D F+ +RL        D  T + +  +   +K M   F+ G+ +RYVHIPD VD +KT+  H++ +H
Sbjct:   30 ENSMVVLLQGLQGEVTTVELRNESSARGRVVN--------VDAFMNVRL--------DDVTYKDRRGKSSQLKDM---FITGRNIRYVHIPDHVDIMKTIEGHLAKIH 118          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: A0A7I4A3P4_PHYPA (Sm domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4A3P4_PHYPA)

HSP 1 Score: 57.0 bits (136), Expect = 7.430e-7
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWE--QGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVS 157
            E+TL  ++Q + G  ++VE++ND+ I G+L++ D  M ++I                     +  T E  +G  K + + F++G  +R+VHIPD+VD +K + + VS
Sbjct:   81 ERTLVCVIQALMGLELLVELRNDLSIRGILDDCDNAMNVII---------------------KDATVEDVEGVQKQLPLVFLRGSNIRFVHIPDNVDIMKLVEERVS 166          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: UPI00140222DA (U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI00140222DA)

HSP 1 Score: 55.1 bits (131), Expect = 9.690e-7
Identity = 34/108 (31.48%), Postives = 55/108 (50.93%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTVH 160
            E +L IL+QG+ GH   VE++++  + G +          +D F+ +RL  S  L +D           G    ++  FV G+ VRYVHIPD++  I T+H  +  +H
Sbjct:   14 ENSLIILLQGIHGHVTTVELRDESSVRGRIVN--------VDAFMNVRL--SEVLYTD---------RAGKALQLDDFFVTGRNVRYVHIPDEISIIDTIHSQLQKIH 102          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: A0A4W6CCR8_LATCA (Organic solute carrier partner 1a n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6CCR8_LATCA)

HSP 1 Score: 55.1 bits (131), Expect = 1.030e-6
Identity = 30/108 (27.78%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTVH 160
            E ++ +L+QG++G    V+++N        E T +   + +D F+ +RL          + +  + W +G V  ++  F+ G+ +RYVHIPD VD +KT+   ++ +H
Sbjct:   16 ENSMVVLLQGLQGEVTTVDLRN--------ESTARGRVVNVDAFMNVRL----------EDVLYRDW-RGQVTRLQDLFITGRNIRYVHIPDHVDIMKTIQSQLAKIH 104          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: A0A8C4DJ85_DICLA (Organic solute carrier partner 1a n=2 Tax=Moronidae TaxID=42148 RepID=A0A8C4DJ85_DICLA)

HSP 1 Score: 54.7 bits (130), Expect = 1.190e-6
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTVH 160
            E ++ +L+QG++G    V++KN        E T +   + +D F+ IRL        D    R +   +G +  ++  F+ G+ VRYVHIPD+VD +KT+   ++ +H
Sbjct:    7 ENSMVVLLQGLQGQVTTVDLKN--------ESTARGRVVNVDAFMNIRL--------DNVLYRDR---RGQLTQLQDLFITGRNVRYVHIPDNVDIMKTIQSQLARIH 95          
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Match: UPI001B3A82A0 (U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3A82A0)

HSP 1 Score: 55.1 bits (131), Expect = 1.330e-6
Identity = 30/108 (27.78%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   53 EKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIRLLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIKTLHKHVSTVH 160
            E ++ +L+QG++G    V+M+N        E T +   + +D F+ IR+          + +  + W +G +  ++  F+ G+ VRY+HIPD VD +KT+   ++ +H
Sbjct:   29 ENSMVVLLQGLQGEVTTVDMRN--------ESTARGRVVSVDAFMNIRM----------EEVLYRDW-RGQLTQLQDMFITGRNVRYIHIPDHVDIMKTIQSQLAKIH 117          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10003.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5S1_ECTSI6.780e-2850.43Putaive LSm10 protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JYY5_9PHAE3.940e-1343.82Sm domain-containing protein n=1 Tax=Ectocarpus sp... [more]
UPI000E456FA59.230e-830.56U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=... [more]
A0A131X8Y5_9ACAR6.590e-730.69Putative small nuclear ribonucleoprotein smd1 n=1 ... [more]
A0A6I9PRP2_9TELE6.990e-729.63U7 snRNA-associated Sm-like protein LSm10 n=3 Tax=... [more]
A0A7I4A3P4_PHYPA7.430e-729.91Sm domain-containing protein n=1 Tax=Physcomitrium... [more]
UPI00140222DA9.690e-731.48U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=... [more]
A0A4W6CCR8_LATCA1.030e-627.78Organic solute carrier partner 1a n=2 Tax=Lates ca... [more]
A0A8C4DJ85_DICLA1.190e-630.56Organic solute carrier partner 1a n=2 Tax=Moronida... [more]
UPI001B3A82A01.330e-627.78U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.100coord: 57..151
e-value: 6.1E-15
score: 56.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..40
NoneNo IPR availablePANTHERPTHR21196U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10coord: 120..162
coord: 51..91
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 61..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10003contigD-mesarthrocarpus_Contig10003:345..3093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10003.1.2mRNA_D-mesarthrocarpus_Contig10003.1.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10003 345..3119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10003.1.2 ID=prot_D-mesarthrocarpus_Contig10003.1.2|Name=mRNA_D-mesarthrocarpus_Contig10003.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=167bp
MSEERLPLRPARNSPLPPLAEEREGSGKGTETSTGERIERTKRRRAKRVP
QLEKTLAILVQGMRGHTVVVEMKNDVEITGVLEETDKDMKLVIDFFLCIR
LLLSASLPSDCQTMRKKTWEQGGVKTMEMAFVQGKMVRYVHIPDDVDAIK
TLHKHVSTVHHSTVHHS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010920LSM_dom_sf