Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A7S0Z522_9CRYP (Histidine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z522_9CRYP)
HSP 1 Score: 57.4 bits (137), Expect = 5.860e-8
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FE FDRRG+LRA+CGGGRYDRLLESFG
Sbjct: 87 FEGFDRRGELRAICGGGRYDRLLESFG 113
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A2I0BC99_9ASPA (Histidine--tRNA ligase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BC99_9ASPA)
HSP 1 Score: 58.2 bits (139), Expect = 6.620e-8
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFGY 84
FEAFDR GKLRA+CGGGRYDRLL +FGY
Sbjct: 354 FEAFDREGKLRAICGGGRYDRLLSTFGY 381
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A835FDD3_9POAL (tRNA-synt_His domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835FDD3_9POAL)
HSP 1 Score: 57.0 bits (136), Expect = 1.490e-7
Identity = 30/75 (40.00%), Postives = 40/75 (53.33%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG--------YHVGD---LQHWSTVNSCIVLRENDGVFLTSRGSWQHGLV 192
FEAFDR G LRA+CGGGRYDRLL +FG + GD ++H +N+ + L W+ G+V
Sbjct: 226 FEAFDREGNLRAICGGGRYDRLLSTFGSEDIPACGFGFGDAVIVEHAERINA-------SRLILVGNSEWERGMV 293
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A426ZLG8_ENSVE (Histidine--tRNA ligase n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZLG8_ENSVE)
HSP 1 Score: 55.5 bits (132), Expect = 4.080e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 104 FEAFDREGKLRAICGGGRYDRLLSTFG 130
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A833VPF2_9POAL (Histidine--tRNA ligase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VPF2_9POAL)
HSP 1 Score: 55.8 bits (133), Expect = 4.300e-7
Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR+GKLRA+CGGGRYDRLL +FG
Sbjct: 344 FEAFDRQGKLRAICGGGRYDRLLSTFG 370
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A811NEH0_9POAL (Histidine--tRNA ligase n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811NEH0_9POAL)
HSP 1 Score: 55.5 bits (132), Expect = 5.240e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 165 FEAFDREGKLRAICGGGRYDRLLSTFG 191
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A8J5GYD7_ZINOF (tRNA-synt_His domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GYD7_ZINOF)
HSP 1 Score: 55.5 bits (132), Expect = 5.680e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 179 FEAFDREGKLRAICGGGRYDRLLSTFG 205
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A4D9CRF8_9STRA (Histidine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRF8_9STRA)
HSP 1 Score: 55.5 bits (132), Expect = 5.800e-7
Identity = 22/27 (81.48%), Postives = 27/27 (100.00%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR+G+LRA+CGGGRYD+LLE+FG
Sbjct: 260 FEAFDRKGELRAICGGGRYDKLLETFG 286
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A5P1ECY7_ASPOF (Histidine--tRNA ligase n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ECY7_ASPOF)
HSP 1 Score: 55.5 bits (132), Expect = 5.820e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 295 FEAFDREGKLRAICGGGRYDRLLSTFG 321
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match:
A0A1D6MIQ0_MAIZE (Histidine--tRNA ligase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6MIQ0_MAIZE)
HSP 1 Score: 55.5 bits (132), Expect = 5.870e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1
Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 340 FEAFDREGKLRAICGGGRYDRLLSTFG 366
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 5.86e-8 / Id = 88.89 Expect = 6.62e-8 / Id = 85.71 Expect = 1.49e-7 / Id = 40.00 Expect = 4.08e-7 / Id = 85.19 Expect = 4.30e-7 / Id = 85.19 Expect = 5.24e-7 / Id = 85.19 Expect = 5.68e-7 / Id = 85.19 Expect = 5.80e-7 / Id = 81.48 Expect = 5.82e-7 / Id = 85.19 Expect = 5.87e-7 / Id = 85.19 Sequence A0A7S0Z522_9CRYP A0A2I0BC99_9ASPA A0A835FDD3_9POAL A0A426ZLG8_ENSVE A0A833VPF2_9POAL A0A811NEH0_9POAL A0A8J5GYD7_ZINOF A0A4D9CRF8_9STRA A0A5P1ECY7_ASPOF A0A1D6MIQ0_MAIZE
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0
Start 0
Seed ortholog 38727.Pavir.Ba03103.1.p
PFAMs HGTP_anticodon,tRNA-synt_His
Model size 267
Max annot lvl 35493|Streptophyta
KEGG rclass RC00055,RC00523
KEGG ko ko:K01892
KEGG Reaction R03655
KEGG Pathway ko00970,map00970
KEGG Module M00359,M00360
Hectar predicted targeting category other localisation
GOs GO:0003674,GO:0003824,GO:0004812,GO:0004821,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006427,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
Exons 2
Evalue 9.63e-08
EggNOG OGs COG0124@1|root,KOG1936@2759|Eukaryota,37QT9@33090|Viridiplantae,3GGEC@35493|Streptophyta,3KN71@4447|Liliopsida,3I5GB@38820|Poales
EC 6.1.1.21
Description Histidyl-tRNA synthetase
Cds size 264
COG category J
BRITE ko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789168.8787565-CDS-D-mesarthrocarpus_Contig10276:597..781 1680789168.8787565-CDS-D-mesarthrocarpus_Contig10276:597..781 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10276 598..781 -
1680789168.8940754-CDS-D-mesarthrocarpus_Contig10276:1536..1616 1680789168.8940754-CDS-D-mesarthrocarpus_Contig10276:1536..1616 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10276 1537..1616 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10276.1.1
>prot_D-mesarthrocarpus_Contig10276.1.1 ID=prot_D-mesarthrocarpus_Contig10276.1.1|Name=mRNA_D-mesarthrocarpus_Contig10276.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=88bp
FEAFDRRGKLRAVCGGGRYDRLLESFGYHVGDLQHWSTVNSCIVLRENDG VFLTSRGSWQHGLVCDGTKARLMFDALTCLCYVYLLCS back to top mRNA from alignment at D-mesarthrocarpus_Contig10276:596..1616-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10276.1.1 ID=mRNA_D-mesarthrocarpus_Contig10276.1.1|Name=mRNA_D-mesarthrocarpus_Contig10276.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1021bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10276:596..1616- (Discosporangium mesarthrocarpum MT17_79)TTTGAGGCCTTTGATCGGAGGGGGAAGCTTCGTGCCGTGTGCGGGGGGGG
GCGATACGACCGCCTGCTGGAGTCATTCGG GTGGGTTTTGACGAGGGTGG
ACTGGCGTTGGTGCCATGTCACGTGCGTTTGTCTTTCACGTGTATGTATG
AGTCTTTTGTGTGTGCGTTTGTCTTTCATGTGTATGTATGAGTCTTTTGT
GTGTGCGTTTGTCTTTCATGTGTATGTATGAGTCTTTTGTGTGTGCGTTT
GTCTTTCATGTGTACGTATGAGTCTTTTGTGTGTGCATTTGTCTTTCATG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTGTGTGTGTATT
TCACGCCTTTAATAGAAGGTAATGCATTCACGTAAAACGAGACCCCCTGG
ACTACAGTCACATAACGTCCGGGTCCCTAACCCTTCAAACCTATCCAAAC
ATGAACATTGTTTAAGGGCCATTCCAAACACACACACACACACACACACA
CAATTTTACATCCTGAAGAAAGTATGTATGATGAAAGATGATGAAGAAAG
GTCACAACTTTCCCAAATAGTCCTCTTGTCACACCAAAACAAAGGTGGGA
TGTGGAACAGTGAGGCATTATTATTGCGTACACAAAGTATCACTGTCAGC
ACAGTATCATTTTCAGCACCATGCAGTCAGTTTAAACGCTGCCAGACCCG
TGGCCAATGGGTGAGAAAAAGAAATGAACTAACCGCAAGAAAAACGAGAG
AAAGAAAAAGGGAAAAACAAGGGGAAGATATGGAAAAGTGGAACAGGCCT
AACAATCGCCATGAACTATGACGCACGGGTCCCAGATATCATGTCGGAGA
TCTGCAGCACTGGAGCACGGTCAACTCATGCATTGTGTTGAGGGAAAATG
ATGGAGTATTTTTGACCTCACGGGGTAGCTGGCAGCATGGGTTGGTGTGT
GATGGCACCAAAGCACGTCTAATGTTTGATGCCCTTACCTGTCTATGTTA
CGTATATCTACTGTGCAGT AG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10276:596..1616-
>mRNA_D-mesarthrocarpus_Contig10276.1.1 ID=mRNA_D-mesarthrocarpus_Contig10276.1.1|Name=mRNA_D-mesarthrocarpus_Contig10276.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=264bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10276:596..1616- (Discosporangium mesarthrocarpum MT17_79) TTTGAGGCCTTTGATCGGAGGGGGAAGCTTCGTGCCGTGTGCGGGGGGGG GCGATACGACCGCCTGCTGGAGTCATTCGGATATCATGTCGGAGATCTGC AGCACTGGAGCACGGTCAACTCATGCATTGTGTTGAGGGAAAATGATGGA GTATTTTTGACCTCACGGGGTAGCTGGCAGCATGGGTTGGTGTGTGATGG CACCAAAGCACGTCTAATGTTTGATGCCCTTACCTGTCTATGTTACGTAT ATCTACTGTGCAGT back to top