mRNA_D-mesarthrocarpus_Contig1027.13.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1027.13.1
Unique NamemRNA_D-mesarthrocarpus_Contig1027.13.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1027.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1027contigD-mesarthrocarpus_Contig1027:20332..20454 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4787.PITG_00592T0
PFAMsOst4
Model size123
Max annot lvl4776|Peronosporales
Hectar predicted targeting categorysignal anchor
Exons1
Evalue0.000563
EggNOG OGs2CZT2@1|root,2SBJQ@2759|Eukaryota,3QGR4@4776|Peronosporales
Ec32 ortholog descriptionOligosaccaryltransferase
Ec32 orthologEc-28_000550.1
DescriptionOligosaccaryltransferase
Cds size123
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789168.5072763-CDS-D-mesarthrocarpus_Contig1027:20331..204541680789168.5072763-CDS-D-mesarthrocarpus_Contig1027:20331..20454Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1027 20332..20454 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1027.13.1prot_D-mesarthrocarpus_Contig1027.13.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1027 20332..20454 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1027.13.1

>prot_D-mesarthrocarpus_Contig1027.13.1 ID=prot_D-mesarthrocarpus_Contig1027.13.1|Name=mRNA_D-mesarthrocarpus_Contig1027.13.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=41bp
MADLDAQLSVVVNCLGIVVFSSIVVYHIVTANPKDTIARQ*
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mRNA from alignment at D-mesarthrocarpus_Contig1027:20332..20454-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1027.13.1 ID=mRNA_D-mesarthrocarpus_Contig1027.13.1|Name=mRNA_D-mesarthrocarpus_Contig1027.13.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=123bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:20332..20454- (Discosporangium mesarthrocarpum MT17_79)
ATGGCTGATCTCGACGCACAGTTATCTGTTGTTGTGAACTGCCTGGGCAT
CGTAGTGTTCTCATCTATCGTTGTTTATCATATCGTCACAGCAAATCCCA
AGGATACGATTGCAAGACAATAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1027:20332..20454-

>mRNA_D-mesarthrocarpus_Contig1027.13.1 ID=mRNA_D-mesarthrocarpus_Contig1027.13.1|Name=mRNA_D-mesarthrocarpus_Contig1027.13.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=123bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:20332..20454- (Discosporangium mesarthrocarpum MT17_79)
ATGGCTGATCTCGACGCACAGTTATCTGTTGTTGTGAACTGCCTGGGCAT
CGTAGTGTTCTCATCTATCGTTGTTTATCATATCGTCACAGCAAATCCCA
AGGATACGATTGCAAGACAATAA
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