Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
D8LGV3_ECTSI (2OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV3_ECTSI)
HSP 1 Score: 59.3 bits (142), Expect = 3.740e-9
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPK 123
R F R+++DH+QKVEF L GSLL+MEG+TQ+HWQH VPK
Sbjct: 225 RRFQLRRKKDHAQKVEFILGGGSLLLMEGSTQEHWQHRVPK 265
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
A0A844M3Q7_9GAMM (Alpha-ketoglutarate-dependent dioxygenase AlkB n=3 Tax=Psychrobacter TaxID=497 RepID=A0A844M3Q7_9GAMM)
HSP 1 Score: 58.2 bits (139), Expect = 7.010e-9
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPKQ 126
R FL R +EDHS+K+E L GSLLVM G Q HWQHSVPKQ
Sbjct: 196 RRFLLRLKEDHSRKIELPLHHGSLLVMAGAIQHHWQHSVPKQ 237
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
A0A0C1F384_9FLAO (DNA repair protein n=1 Tax=Flavobacterium sp. AED TaxID=1423323 RepID=A0A0C1F384_9FLAO)
HSP 1 Score: 57.8 bits (138), Expect = 9.260e-9
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPKQ 126
R FL R+ +DHS K+EF L+ G+LL+M G Q HWQHSVPK+
Sbjct: 190 RRFLLRRNDDHSVKIEFPLKHGTLLIMRGELQHHWQHSVPKE 231
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
A0A5A9ZF46_9GAMM (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Psychrobacter sp. ANT_WB68 TaxID=2597355 RepID=A0A5A9ZF46_9GAMM)
HSP 1 Score: 57.4 bits (137), Expect = 1.350e-8
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPKQ 126
R FL R+R+DHS K+E L+ GS+LVM G Q HWQHSVPKQ
Sbjct: 197 RRFLLRRRDDHSTKLEIPLQHGSILVMAGALQHHWQHSVPKQ 238
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
A0A6H5J9B1_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B1_9PHAE)
HSP 1 Score: 55.1 bits (131), Expect = 3.050e-8
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPK 123
R F R R+D +QK+EF L GSLL+MEG+TQ+HWQH VPK
Sbjct: 26 RRFELRGRKDRTQKMEFVLGGGSLLLMEGSTQEHWQHRVPK 66
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
UPI001EDE62C6 (alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=unclassified Psychrobacter TaxID=196806 RepID=UPI001EDE62C6)
HSP 1 Score: 55.8 bits (133), Expect = 4.980e-8
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPKQ 126
R FL R+R+DHS K++ L+ GS+LVM G Q HWQHSVPKQ
Sbjct: 197 RRFLLRRRDDHSIKLDIPLKHGSILVMAGALQHHWQHSVPKQ 238
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
T2JKF6_CROWT (Alkylated DNA repair protein n=1 Tax=Crocosphaera watsonii WH 0402 TaxID=1284629 RepID=T2JKF6_CROWT)
HSP 1 Score: 54.7 bits (130), Expect = 7.190e-8
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPK 123
R F+FR+R+DH K+E KL G LL+M TQK WQH VPK
Sbjct: 141 RRFIFRRRDDHGNKIERKLNHGDLLIMRDETQKFWQHQVPK 181
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
UPI001F2DF7C9 (alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Marinagarivorans sp. GE09 TaxID=2721545 RepID=UPI001F2DF7C9)
HSP 1 Score: 54.7 bits (130), Expect = 8.560e-8
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPK 123
R F+ R + DH+QK F L GSLL+M G+TQ+HWQH+VPK
Sbjct: 141 RRFVLRSKHDHTQKRSFHLNHGSLLLMAGDTQQHWQHAVPK 181
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
A0A4Q6BWN5_9PROT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6BWN5_9PROT)
HSP 1 Score: 54.7 bits (130), Expect = 9.210e-8
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPK 123
R F+ R+R DH+ K+ +L SGSLL+M G TQ HWQH++PK
Sbjct: 142 RKFVLRRRADHANKISIELESGSLLLMRGETQAHWQHALPK 182
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Match:
A0A839TDJ4_9GAMM (Alkylated DNA repair dioxygenase AlkB n=1 Tax=Psychrobacter luti TaxID=198481 RepID=A0A839TDJ4_9GAMM)
HSP 1 Score: 54.7 bits (130), Expect = 1.320e-7
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPKQ 126
R FL R+R++HS K+E L+ GS+LVM G Q HWQHSVPKQ
Sbjct: 197 RRFLLRRRDNHSIKLEISLQHGSVLVMAGALQHHWQHSVPKQ 238
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10254.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.74e-9 / Id = 65.85 Expect = 7.01e-9 / Id = 66.67 Expect = 9.26e-9 / Id = 59.52 Expect = 1.35e-8 / Id = 64.29 Expect = 3.05e-8 / Id = 63.41 Expect = 4.98e-8 / Id = 61.90 Expect = 7.19e-8 / Id = 58.54 Expect = 8.56e-8 / Id = 58.54 Expect = 9.21e-8 / Id = 56.10 Expect = 1.32e-7 / Id = 61.90 Sequence D8LGV3_ECTSI A0A844M3Q7_9GAMM A0A0C1F384_9FLAO A0A5A9ZF46_9GAMM A0A6H5J9B1_9PHAE UPI001EDE62C6 T2JKF6_CROWT UPI001F2DF7C9 A0A4Q6BWN5_9PROT A0A839TDJ4_9GAMM Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Seed ortholog 2880.D8LGV3 Preferred name ALKBH3 PFAMs 2OG-FeII_Oxy_2 Model size 126 Max annot lvl 2759|Eukaryota KEGG ko ko:K10859,ko:K10860 Hectar predicted targeting category no signal peptide or anchor GOs GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008198,GO:0008283,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016705,GO:0016706,GO:0016787,GO:0031974,GO:0031981,GO:0032451,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035514,GO:0035515,GO:0035552,GO:0035553,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043734,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044728,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051213,GO:0051716,GO:0051747,GO:0055114,GO:0070013,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1990930 Exons 2 Evalue 6.14e-10 EggNOG OGs COG3145@1|root,2QW9E@2759|Eukaryota EC 1.14.11.33,1.14.11.54 Description RNA N1-methyladenosine dioxygenase activity Cds size 126 COG category L BRITE ko00000,ko01000,ko03400
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789167.4058537-CDS-D-mesarthrocarpus_Contig10254:58..100 1680789167.4058537-CDS-D-mesarthrocarpus_Contig10254:58..100 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10254 59..100 + 1680789167.423571-CDS-D-mesarthrocarpus_Contig10254:787..871 1680789167.423571-CDS-D-mesarthrocarpus_Contig10254:787..871 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10254 788..871 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10254.1.1
>prot_D-mesarthrocarpus_Contig10254.1.1 ID=prot_D-mesarthrocarpus_Contig10254.1.1|Name=mRNA_D-mesarthrocarpus_Contig10254.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=42bp
RYFLFRQREDHSQKVEFKLRSGSLLVMEGNTQKHWQHSVPKQ back to top mRNA from alignment at D-mesarthrocarpus_Contig10254:59..871+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10254.1.1 ID=mRNA_D-mesarthrocarpus_Contig10254.1.1|Name=mRNA_D-mesarthrocarpus_Contig10254.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=813bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10254:59..871+ (Discosporangium mesarthrocarpum MT17_79)AGGTACTTCCTTTTTCGTCAGAGAGAAGACCACTCTCAAAAG GTGTTGGC
TTTGAAATCCTCCAAGAGGTCCCCCGTAACCATGACCATAACCCTAATCC
CAACCATTGCCCTCTAATGGCTGGGTGGGGAGGTACTTCCTTTTTCGTCA
GAGAGAAGACCACTCTCAAAAGGTGTTGGCTTTGAAATCCTCCAAAAGGT
CCCCCGTAACCATGACCATAACCCTAATCCCAACCATTGCCCTCTAATGG
CTGGGTGGGGAGGTACTTCCCTTTTCGTCAGAGAGAAGATCGCCTTCTCT
CTGAAAAGAAAATGTACTGCTTCTGTGGCCCATCCCTAGAGGGCCGGAGC
CAGGCGGAAGATTCTAGTTTTGACAAGTGAATTTCTGTGTTTTATCTAAT
GTCTTGATTACTTTCTCTGTTTCAAGTGTGAATTTGCAGATGTTGGCCCT
GTTAGGAAGCTAGTGGGAAAGAGCTAGAGTTAGAATGCTTTGGATACTTG
TTTTTGGTAAACATTCCAGCAGGACCCCCAAACCCCTTGTGGTCACCTCA
GCACCACCTCCCAGTTTGACAGGTCCTGCGTCAGGTATAGTTTTTCTCCA
TTCCCTTTATCAAATTCCTTTGTGCATGTAACCCTATCCCCAACCCTGAC
TTTTCTCTGTCTGACCCACCTCACCTGCCCCCTAAACAACCACCTCTCCC
TCATGACTCATGACACTGCGTCCTGCTAGGTTGAGTTCAAGCTGAGGTCC
GGCTCCCTCCTGGTGATGGAGGGCAATACTCAGAAGCACTGGCAGCACTC
TGTCCCTAAGCAG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10254:59..871+
>mRNA_D-mesarthrocarpus_Contig10254.1.1 ID=mRNA_D-mesarthrocarpus_Contig10254.1.1|Name=mRNA_D-mesarthrocarpus_Contig10254.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=126bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10254:59..871+ (Discosporangium mesarthrocarpum MT17_79) back to top