mRNA_D-mesarthrocarpus_Contig10233.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: D7FKM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM2_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.090e-34 Identity = 73/93 (78.49%), Postives = 81/93 (87.10%), Query Frame = 3 Query: 504 GGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
GGMGDVMARILGQ+LDTR + PVLA+RKT+ M+EME S +RAE RGK+A +RA MT QFV PDHTT DYERQLKKIATRGVVALFNAISKRQ
Sbjct: 149 GGMGDVMARILGQKLDTRVQAPVLAKRKTKTMKEMENASVKRAETRGKSAARRANMTQQFVIPDHTTTDYERQLKKIATRGVVALFNAISKRQ 241
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A835YTV9_9STRA (Rrp15p-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV9_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.800e-25 Identity = 86/221 (38.91%), Postives = 113/221 (51.13%), Query Frame = 3 Query: 120 KSKAGKGEEAVLK---WDSDDSTVDDQDPGKVPTKSLPKKMMSEIRNSNESHGTVGVGKRRRPSSGAAVTDIKKEDESVADDAADLATXXXXXXXXXXXXXXXXGDGSEDVQKDEGATADKREGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAIS 773
K+ KG+ A K WD D+S + P + P R+S+ S G G +R+ + A + E++ADDA + + GD + +A K G GGMGDVMARILGQ++ + PVLA+RKT+ M+EM EE+ R+A K AE+RA Q V PD T+ D ERQLKKIATRGVVALFNAIS
Sbjct: 15 KAAGKKGKNAKPKQVSWDYDNSEDETSGPREAP------------RSSDASGGAAKRGVKRKLA--VAEKPARAATEALADDAGEYSADASGGEDMSQHSDDVPGDAESQSSDSDTGSASKHHRPASGDGAGGMGDVMARILGQQI-AGSSAPVLAKRKTKAMKEMAEEAERKATLVAKRAERRAARAQQLVVPDVTSQDRERQLKKIATRGVVALFNAIS 220
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A4D9DC47_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC47_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.610e-19 Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 477 EGKVKSGGG--GGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISK 776
EG + GG GM DVMARIL Q+++ K PVLA+R+T +M+E EEE RA A+ A KRA + Q PDHT A+ ERQLK+IATRGVVALFNA++K
Sbjct: 123 EGPTRPHGGQKDGMADVMARILNQQVNK--KAPVLAKRRTALMKETEEEKKARARAKTAAERKRATLNHQLYVPDHTDAEKERQLKRIATRGVVALFNAVTK 222
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A0P1B0F5_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0F5_PLAHL) HSP 1 Score: 76.6 bits (187), Expect = 8.240e-13 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
G GD M++ILGQ + +P+LA+R T MRE+E E AR AEKR V PDHTTA +R+L+ IAT+GVVALFNAI K Q
Sbjct: 56 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIEIEKKETKTARVSTAEKREREQKDMVVPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 146
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A7S3YGD6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGD6_HETAK) HSP 1 Score: 76.6 bits (187), Expect = 1.280e-12 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 492 SGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQRG 788
+G G GM +V++++L Q + P+LA+RKT++M++ E ++ R E + + T +APD A YERQLKK+ATRGVVALFNAI+K QRG
Sbjct: 75 AGKGFGMSEVISKLLEQPVSK--PNPILAKRKTKMMKDREAQAQERRELAQRQLANKEKKTKGLIAPDPLQAPYERQLKKVATRGVVALFNAIAKHQRG 171
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: K3W9B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9B8_GLOUD) HSP 1 Score: 76.3 bits (186), Expect = 1.850e-12 Identity = 47/92 (51.09%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
G GD M++ILGQ + +P+LA+R T MRE+ EE AR AAEKR + PDHTTA +R+L+ IAT+GVVALFNAI K Q
Sbjct: 98 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIMEEKKVTKTARISAAEKREKEQKDMIIPDHTTAVQDRRLRMIATKGVVALFNAIEKHQ 188
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A6A3SMK5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SMK5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.460e-12 Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
G GD M++ILGQ + +P+LA+R T MRE++ E AR AAEKR PDHTTA +R+L+ IAT+GVVALFNAI K Q
Sbjct: 69 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIQSEKKETKLARLSAAEKRERDQKDMAVPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 159
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A3R7HD14_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HD14_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 8.720e-12 Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 441 VQKDEGATADKREGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
V+ GA+ + E K G GD M++ILGQ + +P+LA+R T MRE++ + AR AEKR PDHTTA +R+L+ IAT+GVVALFNAI K Q
Sbjct: 47 VEPQSGASETEDEEDNKGHEAVGFGDAMSKILGQNV-AEDAQPILAKRTTARMREIQSDKKETKTARLSTAEKREREQKDMAIPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 159
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A8J5M0U7_9STRA (J domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M0U7_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.690e-11 Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
G GD M++ILGQ + +P+LA+R T MRE++ + AR AAEKR PDHTTA +R+L+ IAT+GVVALFNAI K Q
Sbjct: 59 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIQSDKKETKTARLSAAEKREREQKDMTLPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 149
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A484DXN5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXN5_BRELC) HSP 1 Score: 72.8 bits (177), Expect = 1.770e-11 Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 435 EDVQKDEGATADKREGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
E + + + A E V++ G GD M++ILGQ + + +P+LA+R T MRE++ E AR AEKR P+HTTA +R+L+ IAT+GVVALFNAI K Q
Sbjct: 24 EKINEVDAVEATSSEDDVETHDAVGFGDAMSKILGQNV-AKNAQPILAKRTTARMREIKNEKKETKIARLSTAEKRERDLKDMAVPNHTTAIQDRKLRTIATKGVVALFNAIEKHQ 138 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10233.1.1 >prot_D-mesarthrocarpus_Contig10233.1.1 ID=prot_D-mesarthrocarpus_Contig10233.1.1|Name=mRNA_D-mesarthrocarpus_Contig10233.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=254bp MAGRTMKITRTTKVRPEKGQGWGRGKRKREGKSKAGKGEEAVLKWDSDDSback to top mRNA from alignment at D-mesarthrocarpus_Contig10233:992..3894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10233.1.1 ID=mRNA_D-mesarthrocarpus_Contig10233.1.1|Name=mRNA_D-mesarthrocarpus_Contig10233.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2903bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10233:992..3894+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10233:992..3894+ >mRNA_D-mesarthrocarpus_Contig10233.1.1 ID=mRNA_D-mesarthrocarpus_Contig10233.1.1|Name=mRNA_D-mesarthrocarpus_Contig10233.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=762bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10233:992..3894+ (Discosporangium mesarthrocarpum MT17_79)back to top |