mRNA_D-mesarthrocarpus_Contig10233.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10233.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10233.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: D7FKM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM2_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.090e-34
Identity = 73/93 (78.49%), Postives = 81/93 (87.10%), Query Frame = 3 
Query:  504 GGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            GGMGDVMARILGQ+LDTR + PVLA+RKT+ M+EME  S +RAE RGK+A +RA MT QFV PDHTT DYERQLKKIATRGVVALFNAISKRQ
Sbjct:  149 GGMGDVMARILGQKLDTRVQAPVLAKRKTKTMKEMENASVKRAETRGKSAARRANMTQQFVIPDHTTTDYERQLKKIATRGVVALFNAISKRQ 241
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A835YTV9_9STRA (Rrp15p-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.800e-25
Identity = 86/221 (38.91%), Postives = 113/221 (51.13%), Query Frame = 3 
Query:  120 KSKAGKGEEAVLK---WDSDDSTVDDQDPGKVPTKSLPKKMMSEIRNSNESHGTVGVGKRRRPSSGAAVTDIKKEDESVADDAADLATXXXXXXXXXXXXXXXXGDGSEDVQKDEGATADKREGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAIS 773
            K+   KG+ A  K   WD D+S  +   P + P            R+S+ S G    G +R+ +   A    +   E++ADDA + +                 GD        +  +A K        G GGMGDVMARILGQ++   +  PVLA+RKT+ M+EM EE+ R+A    K AE+RA    Q V PD T+ D ERQLKKIATRGVVALFNAIS
Sbjct:   15 KAAGKKGKNAKPKQVSWDYDNSEDETSGPREAP------------RSSDASGGAAKRGVKRKLA--VAEKPARAATEALADDAGEYSADASGGEDMSQHSDDVPGDAESQSSDSDTGSASKHHRPASGDGAGGMGDVMARILGQQI-AGSSAPVLAKRKTKAMKEMAEEAERKATLVAKRAERRAARAQQLVVPDVTSQDRERQLKKIATRGVVALFNAIS 220
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A4D9DC47_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC47_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.610e-19
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 3 
Query:  477 EGKVKSGGG--GGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISK 776
            EG  +  GG   GM DVMARIL Q+++   K PVLA+R+T +M+E EEE   RA A+  A  KRA +  Q   PDHT A+ ERQLK+IATRGVVALFNA++K
Sbjct:  123 EGPTRPHGGQKDGMADVMARILNQQVNK--KAPVLAKRRTALMKETEEEKKARARAKTAAERKRATLNHQLYVPDHTDAEKERQLKRIATRGVVALFNAVTK 222
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A0P1B0F5_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0F5_PLAHL)

HSP 1 Score: 76.6 bits (187), Expect = 8.240e-13
Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 3 
Query:  507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            G GD M++ILGQ +     +P+LA+R T  MRE+E E      AR   AEKR       V PDHTTA  +R+L+ IAT+GVVALFNAI K Q
Sbjct:   56 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIEIEKKETKTARVSTAEKREREQKDMVVPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 146
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A7S3YGD6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGD6_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-12
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 3 
Query:  492 SGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQRG 788
            +G G GM +V++++L Q +      P+LA+RKT++M++ E ++  R E   +    +   T   +APD   A YERQLKK+ATRGVVALFNAI+K QRG
Sbjct:   75 AGKGFGMSEVISKLLEQPVSK--PNPILAKRKTKMMKDREAQAQERRELAQRQLANKEKKTKGLIAPDPLQAPYERQLKKVATRGVVALFNAIAKHQRG 171
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: K3W9B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9B8_GLOUD)

HSP 1 Score: 76.3 bits (186), Expect = 1.850e-12
Identity = 47/92 (51.09%), Postives = 59/92 (64.13%), Query Frame = 3 
Query:  507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            G GD M++ILGQ +     +P+LA+R T  MRE+ EE      AR  AAEKR       + PDHTTA  +R+L+ IAT+GVVALFNAI K Q
Sbjct:   98 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIMEEKKVTKTARISAAEKREKEQKDMIIPDHTTAVQDRRLRMIATKGVVALFNAIEKHQ 188
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A6A3SMK5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SMK5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.460e-12
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 3 
Query:  507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            G GD M++ILGQ +     +P+LA+R T  MRE++ E      AR  AAEKR         PDHTTA  +R+L+ IAT+GVVALFNAI K Q
Sbjct:   69 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIQSEKKETKLARLSAAEKRERDQKDMAVPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 159
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A3R7HD14_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HD14_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.720e-12
Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 3 
Query:  441 VQKDEGATADKREGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            V+   GA+  + E   K     G GD M++ILGQ +     +P+LA+R T  MRE++ +      AR   AEKR         PDHTTA  +R+L+ IAT+GVVALFNAI K Q
Sbjct:   47 VEPQSGASETEDEEDNKGHEAVGFGDAMSKILGQNV-AEDAQPILAKRTTARMREIQSDKKETKTARLSTAEKREREQKDMAIPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 159
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A8J5M0U7_9STRA (J domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M0U7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.690e-11
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 3 
Query:  507 GMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            G GD M++ILGQ +     +P+LA+R T  MRE++ +      AR  AAEKR         PDHTTA  +R+L+ IAT+GVVALFNAI K Q
Sbjct:   59 GFGDAMSKILGQNV-AEDAQPILAKRTTARMREIQSDKKETKTARLSAAEKREREQKDMTLPDHTTAVQDRKLRMIATKGVVALFNAIEKHQ 149
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Match: A0A484DXN5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXN5_BRELC)

HSP 1 Score: 72.8 bits (177), Expect = 1.770e-11
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 3 
Query:  435 EDVQKDEGATADKREGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESARRAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISKRQ 782
            E + + +   A   E  V++    G GD M++ILGQ +  +  +P+LA+R T  MRE++ E      AR   AEKR         P+HTTA  +R+L+ IAT+GVVALFNAI K Q
Sbjct:   24 EKINEVDAVEATSSEDDVETHDAVGFGDAMSKILGQNV-AKNAQPILAKRTTARMREIKNEKKETKIARLSTAEKRERDLKDMAVPNHTTAIQDRKLRTIATKGVVALFNAIEKHQ 138
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10233.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKM2_ECTSI1.090e-3478.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTV9_9STRA5.800e-2538.91Rrp15p-domain-containing protein n=1 Tax=Tribonema... [more]
A0A4D9DC47_9STRA9.610e-1955.88Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0P1B0F5_PLAHL8.240e-1351.09Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A7S3YGD6_HETAK1.280e-1245.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3W9B8_GLOUD1.850e-1251.09Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A3SMK5_9STRA3.460e-1250.00Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3R7HD14_9STRA8.720e-1242.98Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A8J5M0U7_9STRA1.690e-1148.91J domain-containing protein n=1 Tax=Phytophthora a... [more]
A0A484DXN5_BRELC1.770e-1141.38Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10233contigD-mesarthrocarpus_Contig10233:992..3894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKM2
Preferred nameRRP15
PFAMsRrp15p
Model size788
Max annot lvl2759|Eukaryota
KEGG koko:K17967
KEGG TC9.B.25.1
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
Exons3
Evalue1.41e-35
EggNOG OGsKOG2974@1|root,KOG2974@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function DUF1665
Ec32 orthologEc-09_000740.1
Descriptionribosomal RNA processing 15 homolog
Cds size762
COG categoryEG
BRITEko00000,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789165.8931358-UTR-D-mesarthrocarpus_Contig10233:991..10171680789165.8931358-UTR-D-mesarthrocarpus_Contig10233:991..1017Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10233 992..1017 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789165.908653-CDS-D-mesarthrocarpus_Contig10233:1017..15541680789165.908653-CDS-D-mesarthrocarpus_Contig10233:1017..1554Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10233 1018..1554 +
1680789165.922081-CDS-D-mesarthrocarpus_Contig10233:3094..32781680789165.922081-CDS-D-mesarthrocarpus_Contig10233:3094..3278Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10233 3095..3278 +
1680789165.9320173-CDS-D-mesarthrocarpus_Contig10233:3853..38941680789165.9320173-CDS-D-mesarthrocarpus_Contig10233:3853..3894Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10233 3854..3894 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10233.1.1prot_D-mesarthrocarpus_Contig10233.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10233 1018..3894 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10233.1.1

>prot_D-mesarthrocarpus_Contig10233.1.1 ID=prot_D-mesarthrocarpus_Contig10233.1.1|Name=mRNA_D-mesarthrocarpus_Contig10233.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=254bp
MAGRTMKITRTTKVRPEKGQGWGRGKRKREGKSKAGKGEEAVLKWDSDDS
TVDDQDPGKVPTKSLPKKMMSEIRNSNESHGTVGVGKRRRPSSGAAVTDI
KKEDESVADDAADLATSEQEASGDDSSHEEDDGDGSEDVQKDEGATADKR
EGKVKSGGGGGMGDVMARILGQELDTRTKEPVLARRKTRVMREMEEESAR
RAEARGKAAEKRACMTSQFVAPDHTTADYERQLKKIATRGVVALFNAISK
RQRG
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10233:992..3894+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10233.1.1 ID=mRNA_D-mesarthrocarpus_Contig10233.1.1|Name=mRNA_D-mesarthrocarpus_Contig10233.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2903bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10233:992..3894+ (Discosporangium mesarthrocarpum MT17_79)
AACGGAGAAAAGCGACGGAGGAAGGTATGGCGGGCCGGACGATGAAGATT
ACCCGCACGACAAAGGTTCGCCCGGAAAAGGGTCAGGGTTGGGGTAGGGG
AAAGAGGAAGAGGGAGGGAAAGAGCAAGGCTGGTAAAGGCGAGGAAGCCG
TGCTCAAGTGGGACTCCGACGACTCCACCGTGGATGACCAAGACCCCGGG
AAGGTCCCCACTAAATCCTTGCCCAAAAAGATGATGTCCGAGATAAGAAA
TAGCAATGAAAGCCATGGAACCGTGGGCGTGGGCAAACGACGTCGTCCTT
CCAGCGGTGCTGCAGTGACAGACATCAAGAAGGAGGACGAAAGTGTAGCC
GATGATGCAGCCGATCTCGCCACATCTGAGCAGGAAGCTAGCGGCGATGA
TTCCTCCCATGAAGAAGATGACGGCGACGGAAGTGAAGATGTGCAGAAGG
ACGAGGGGGCTACTGCGGACAAGAGGGAAGGGAAGGTCAAATCAGGTGGA
GGTGGGGGTATGGGAGACGTCATGGCTAGAATCCTTGGGCAGGAGCTGGA
CACCAGGACGAAGGTATGTGGAGAACGGGTCAAATCAACTCTCGAACATT
ATGTCTCTGCTGGCAAGGGGGAAGTGTGTTTGGGATGGTTTTAAGCGCTG
GAGAACCAGGTCGACTTCAGGTGTACTGTCGAATCCTCAGCTCCAGCAGT
GAGCTGACCACCAACCCCCATCACGCTTGACCGAAAGTCTACGAAAACGT
TGATGCCTCGGGTCTCGGAAAGAAATTTAGGATGCTGATGTTGATCCTCA
ACCCCCTGTGTAACGCTATTTATCGGCTTCTTCGCAACATTCCTTGGGCG
ATGTTCGCTCTGCTGCTCAGTCTTTATTCCCCTTCAAGTTGGGCTTACGA
CGGTTGACAGTGGATCAGCTGGTTAATAGGTTTCCCATAGGAGTGTGCAC
AGCATTCATCCCATGACCGTGCTTAGAAGTTTAGATGCTCTCCATTTCCC
CCATAGAAAGACTCCCATTGGGTGATGGTGCAAGGCAACTATTGAATACG
CAGGCTTCAAGCCCAATAGATCGTGCTCACATCCGTGACTGGTCGATCCA
CCTGCACGAAAACCGGATGCTTAAGTATGCTGCGTAAAAGAGCAACCAGA
AAGTTTGAATGGGACACATGGAATGAGATGGCTCCACCAAGACTCTCTAA
TGATGTCGTGATGGGATCTACAGTTCTTGTTACTTGGGTCTACGATACGA
AATTAAAAAACGGTACTTGATCCGACTCAACCCCATTGGTGTTGCGCTTG
AGATGTATGCCATCATCACACCTTTTTCAGGGGGATTTTATTCTCAGCCC
TTTGCTGGTTTAGTTTTTTTTAGACTGTCTGCAACTGGGTGACTGCTGAC
TTGAATGTCGTGGTTGTGCACTGCTGATGCCTCTTATTTACTAACCGTTT
CGCAGGGAATGAAAACCATAGTATACATGCCCCAAATGTAGGGACAATGT
AGGCTCTTGCGAGGTGGATCCTGTAGGGATAGCTCTGTAAGTCATGGATG
AGCTCCACTATGCGTTGTTTGCACTATGCCTGTTTCGGCTGCCACGCCTG
TTACAGTTACTGTGCCTGTTAGCACTATGCTAGTTACAGCTACTATGCCT
GTTACATTTGCTACGTACATCATTTCATCCGGTAATTCCAGGGCTTTTTT
TGCTCTCTTGAGTGGCAAGAGAGAGTACAGTTAAGGACTAGGGTAAAGGT
TAGGTTCTGATGGAGTGAGCTGATTGCCTAGAGCCGGTGCTCTCACCTAC
TGTACCACCTACCCATTTCCTAGGGTCAGGGTTGGAAAGAGGCGACTCTT
AGCTATGCCAACCCCCAAATGGTCAGGTTGGCCTTCATGGTAATCCCTCT
GAACCACGTGATCCCCCTCCCATGGCCACTGAAATCCACACCGTCTCTAC
AATATTCTTGCCTTCTCTCTTTGCTTCTGCTGCACTTTCCTCCCACCCCT
GTGCTTTCTTCCTTTTGTTCTTGTTCTTGTTTTTTTTATTTTTCTTGTTC
CTCTTCTCTCGGGTGGTTGGGGTGGTGGCGAAACATGAAACCGAAACGGA
AAGGAGCCGGTGCTGGCCAGGCGGAAGACGCGGGTGATGCGGGAGATGGA
GGAGGAGTCCGCCAGGCGGGCTGAGGCCAGGGGGAAGGCGGCAGAGAAGA
GGGCCTGCATGACTAGCCAGTTTGTTGCCCCAGACCACACCACCGCAGAC
TATGAGCGACAGCTGAAGAAGATTGCCACCCGCGGGGGTGAGGGAGCACA
GAGGGGGAGGGGCTCAGGGTTAGGGTTAGGGCTGGGATTAGGGTCGGGGG
CTGTGTTTTGAGGCAACATGAGGCTTAACCGGCGGTGGTGGAGGGAATGG
CCATCTGTAGCCGTGGTGGGCGTCAGAGGATGGTAGGGGATGGGTGCATT
AGGGGGCACAAACTTCGGAGTACTTCAATCTTAGGGTTAGGGTTGGGCTT
TGGTTGGGGGTGAGGGGTTGTGGATCAAGACGGCGTGCTTCCTTCTGCTT
TCTTCCTTGTTTCTTGCTTGTTCGCTTTCACTCTTCTTCTTCTCTTTCTT
TCAGAGGTAGCCTCGATTTTTTTTTTTTGCTCGTGAAGCAGAGAATTCCT
CGCCGATGAAAGGAGCTCTTGGGTTGGAGGAGTAGGAAAGGATAAGATGG
GTGTTAGGCTGCTACATCCTCTCTTGACTACCACTCGAGCCACGAATTCC
TGCACCAACCCTACGGCAAGGTGGGTGTCCTTTGAACCATATCCCACTTG
TCTTCCCCCCCCCCCGTCCTCCCCCCCCACCCCCACTTACTCCCACAATC
CCCCCCCCACAGTGGTGGCCTTGTTCAACGCCATCAGCAAGCGGCAGAGG
GGG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10233:992..3894+

>mRNA_D-mesarthrocarpus_Contig10233.1.1 ID=mRNA_D-mesarthrocarpus_Contig10233.1.1|Name=mRNA_D-mesarthrocarpus_Contig10233.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=762bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10233:992..3894+ (Discosporangium mesarthrocarpum MT17_79)
ATGGCGGGCCGGACGATGAAGATTACCCGCACGACAAAGGTTCGCCCGGA
AAAGGGTCAGGGTTGGGGTAGGGGAAAGAGGAAGAGGGAGGGAAAGAGCA
AGGCTGGTAAAGGCGAGGAAGCCGTGCTCAAGTGGGACTCCGACGACTCC
ACCGTGGATGACCAAGACCCCGGGAAGGTCCCCACTAAATCCTTGCCCAA
AAAGATGATGTCCGAGATAAGAAATAGCAATGAAAGCCATGGAACCGTGG
GCGTGGGCAAACGACGTCGTCCTTCCAGCGGTGCTGCAGTGACAGACATC
AAGAAGGAGGACGAAAGTGTAGCCGATGATGCAGCCGATCTCGCCACATC
TGAGCAGGAAGCTAGCGGCGATGATTCCTCCCATGAAGAAGATGACGGCG
ACGGAAGTGAAGATGTGCAGAAGGACGAGGGGGCTACTGCGGACAAGAGG
GAAGGGAAGGTCAAATCAGGTGGAGGTGGGGGTATGGGAGACGTCATGGC
TAGAATCCTTGGGCAGGAGCTGGACACCAGGACGAAGGAGCCGGTGCTGG
CCAGGCGGAAGACGCGGGTGATGCGGGAGATGGAGGAGGAGTCCGCCAGG
CGGGCTGAGGCCAGGGGGAAGGCGGCAGAGAAGAGGGCCTGCATGACTAG
CCAGTTTGTTGCCCCAGACCACACCACCGCAGACTATGAGCGACAGCTGA
AGAAGATTGCCACCCGCGGGGTGGTGGCCTTGTTCAACGCCATCAGCAAG
CGGCAGAGGGGG
back to top