prot_D-mesarthrocarpus_Contig9940.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9940.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9940.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length213
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9940.1.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.610e-18
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 0 
Query:    7 DLEETSTMSHISYASHVSHHSVESARSNSWSGSVMGGLGLVDYPAGIPAKQWGRLQDRTVRWLMR 71
            DLEE+S MSH++         VESARS SWSGS++GG G VDYPAGIP KQWGR+QDRTVRWL+R
Sbjct:  254 DLEESSAMSHVT---------VESARSGSWSGSIVGGFGFVDYPAGIPPKQWGRIQDRTVRWLIR 309
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BLAST of mRNA_D-mesarthrocarpus_Contig9940.1.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.620e-18
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 0 
Query:    7 DLEETSTMSHISYASHVSHHSVESARSNSWSGSVMGGLGLVDYPAGIPAKQWGRLQDRTVRWLMR 71
            DLEE+S MSH++         VESARS SWSGS++GG G VDYPAGIP KQWGR+QDRTVRWL+R
Sbjct:  277 DLEESSAMSHVT---------VESARSGSWSGSIVGGFGFVDYPAGIPPKQWGRIQDRTVRWLIR 332
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9940.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KV84_9PHAE2.610e-1867.69VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FJN4_ECTSI2.620e-1867.69VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9940contigD-mesarthrocarpus_Contig9940:1892..4544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9940.1.1mRNA_D-mesarthrocarpus_Contig9940.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9940 1892..4544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9940.1.1 ID=prot_D-mesarthrocarpus_Contig9940.1.1|Name=mRNA_D-mesarthrocarpus_Contig9940.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=213bp
AGTGGIDLEETSTMSHISYASHVSHHSVESARSNSWSGSVMGGLGLVDYP
AGIPAKQWGRLQDRTVRWLMRGDTIQRNQGPRKGGSLGAGAFQGGPGGGP
EGSGGPSSSGGPGSVGGSSRGPLKPPALSSLALVTGPSDAQSATSAGSGS
TANGGRPFSSASSPPPTLVSPLYSPTTSGKGAATAGGGGREDDGVHAKWL
AQLEVVSSKNIED
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