prot_D-mesarthrocarpus_Contig994.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig994.2.1
Unique Nameprot_D-mesarthrocarpus_Contig994.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length192
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A6H5K1Z6_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z6_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 7.490e-60
Identity = 94/144 (65.28%), Postives = 121/144 (84.03%), Query Frame = 0
Query:   40 VYQGLKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVKKKKDLFSLDDVHVRLKEV 183
            V QGL   FQG+RGGK DP MLD+V+V+ YG+M+NL+ VAQ SMKGPQL++L++YDPGMT+ +  AVR+C MGLNP  +GQ QV VPIPK +KESR+A+ K+AAKHAEK+KVV+RGIRHK+ D++KKKKD F  DDVH+R+KE+
Sbjct:  131 VLQGLTRNFQGLRGGKTDPGMLDNVKVESYGSMTNLASVAQASMKGPQLIILSVYDPGMTKAIEDAVRECGMGLNPYSEGQGQVHVPIPKPTKESREAVAKVAAKHAEKSKVVVRGIRHKILDQIKKKKDSFPEDDVHMRIKEI 274          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A836CM55_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM55_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.330e-39
Identity = 81/154 (52.60%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   40 VYQGLKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQN----------QVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVKKKKDLFSLDDVHVRLKEV 183
            V +GLK +   +RGG+ DPAM DH+ V  YG    LS VAQVS KGPQL++LT YDP     V  AVRD  M LNP +DG             V VPIPK S E+R++LVK+A K  EK KV +RGIRHKV +++KK K  FS DDVH R KE+
Sbjct:  157 VLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEI 310          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A6V1LRG3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LRG3_HETAK)

HSP 1 Score: 117 bits (292), Expect = 1.120e-28
Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 0
Query:   42 QGLKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVKK 166
            Q L  + + +R G+ADPAM DH+QVD YG  + LS VA V+ +GPQL+++ +YDP +   V  A+R+C MGLNP       +SVP+PKTSKE R+ L ++A +  EKTK  +R  R    D+ KK
Sbjct:  109 QALDKDLRTLRAGRADPAMFDHLQVDAYGQSAPLSAVADVAPRGPQLLVVNVYDPQLKGAVDTAIRECGMGLNPQALEGGALSVPVPKTSKEKREKLARMAKQQGEKTKQNVRNARRSAIDETKK 233          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: UPI001BA79AAC (ribosome recycling factor n=1 Tax=Roseomonas terrae TaxID=424799 RepID=UPI001BA79AAC)

HSP 1 Score: 112 bits (280), Expect = 8.250e-28
Identity = 53/114 (46.49%), Postives = 86/114 (75.44%), Query Frame = 0
Query:   44 LKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIR 157
            LK EFQG+R G+A PA+L+ V+V+ YG+++ L++VA VS+ GP L+ + ++D G+T+ V +A+R+ ++GLNP  +GQ  + VP+P  + E R+ LVK AA++AE T+V +RG+R
Sbjct:   23 LKKEFQGLRTGRASPALLEPVRVEAYGSVTPLNQVANVSIAGPGLLSVQVWDKGLTKAVESAIREANLGLNPQAEGQ-VIRVPLPPLTAERRNELVKAAARYAESTRVAIRGVR 135          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A7S1U0D6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0D6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.860e-26
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0
Query:   44 LKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVKKKKDLFSL--DDVH 177
            LK  F GIRGG+ +P M DHV VD YG+ + ++ VAQV++K P+   +T++DP + + VA A+    M LNP V+G N ++VPIPK ++E R+ + K A K  E  K  LR +R    D+VK  ++L  L  DD H
Sbjct:   51 LKENFAGIRGGRPEPGMFDHVMVDAYGSPTPMNAVAQVALKTPKAATVTVFDPSVAQNVAEALEGAGMDLNPQVEG-NTITVPIPKLTRELREDMAKAAGKQLETAKQALRRLRKSALDEVKDNEELGELSEDDAH 185          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A840XNP9_9PROT (Ribosome-recycling factor n=12 Tax=Roseomonas TaxID=125216 RepID=A0A840XNP9_9PROT)

HSP 1 Score: 107 bits (268), Expect = 5.120e-26
Identity = 51/122 (41.80%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   44 LKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVK 165
            LK EF G+R G+A PA+L+ ++V+ YG+M+ L++VA +S+ GP L+ + ++D  +T+ V +A+R+ ++GLNP  +GQ  + VP+P  + E R+ L K AA++AE+T+V +RG+R    ++VK
Sbjct:   23 LKKEFAGLRTGRASPALLEPIRVEAYGSMTPLNQVANISVAGPGLLSVQVWDKALTKHVESAIREANLGLNPQAEGQ-VIRVPLPPLTTERRNELAKAAARYAEQTRVAIRGVRRDGMEQVK 143          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A437MJH9_9PROT (Ribosome-recycling factor n=2 Tax=Rhodovarius TaxID=268408 RepID=A0A437MJH9_9PROT)

HSP 1 Score: 107 bits (266), Expect = 1.070e-25
Identity = 60/143 (41.96%), Postives = 91/143 (63.64%), Query Frame = 0
Query:   44 LKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVK--KKKDLFSLDDVHVRLKEVR 184
            LK EFQG+R G+A PA+L+ ++V++YG +S L++VA VS+ GP L+ + +YD G  + V  A+RD  + LNP  +GQ  + VP+P  + E R+ L K AAK+AE  K+ +R +R    ++ +  KKK   S DD     KEV+
Sbjct:   25 LKKEFQGLRTGRASPALLEPIRVEIYGAVSPLNQVANVSVGGPGLLNVQVYDRGQVKAVEIAIRDSGLNLNPQTEGQT-IRVPLPPLTTERRNELSKQAAKYAEGAKIAVRNVRRDGMEQAQGWKKKSEISEDDAKRLEKEVQ 166          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: A0A3B9K4C6_9PROT (Ribosome-recycling factor n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A3B9K4C6_9PROT)

HSP 1 Score: 105 bits (263), Expect = 2.640e-25
Identity = 55/138 (39.86%), Postives = 87/138 (63.04%), Query Frame = 0
Query:   42 QGLKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVKKKKDLFSLDDVHVR 179
            + +KN+F G+R G+A   MLD +QVD YG+   L++ A V+   P+L+ + ++D  M + V A++R+ D+GLNP  DGQ  + +PIP  S+E R  + K+A K AE  K+V+R IR    DK+KKK+    + +  +R
Sbjct:   18 ESMKNDFSGLRAGRASVNMLDSIQVDAYGSKIPLNQAATVNAPEPKLITIQVWDKSMVDSVEASIRESDLGLNPMKDGQ-LIRLPIPDLSEERRLEITKVAKKFAENAKIVVRNIRRDSLDKIKKKQSDSEISEDELR 154          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: UPI001C2C08B0 (ribosome recycling factor n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2C08B0)

HSP 1 Score: 105 bits (261), Expect = 5.670e-25
Identity = 56/144 (38.89%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   44 LKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVK--KKKDLFSLDDVHVRLKEVRQ 185
            L+ EF G+R G+A PA+L+ ++V+ YGT   L++VA VS+ GP L+ + ++D  + + V  A+RD  +GLNP  +GQ  + VP+P  ++E R+ LVK A K++E T+V +RG+R    +++K  +KK     DD     +EV++
Sbjct:   23 LRKEFSGLRTGRASPALLEPIRVEAYGTEQPLNQVANVSIAGPGLLSVQVWDKSVIKAVEVAIRDSGLGLNPQTEGQ-VIRVPLPPLTQERRNDLVKAAGKYSEGTRVAVRGVRRDGMEQIKTWEKKHEIGEDDAKTWAEEVQK 165          
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Match: UPI001E4BBADF (ribosome recycling factor n=1 Tax=Roseomonas sp. OT10 TaxID=2897332 RepID=UPI001E4BBADF)

HSP 1 Score: 105 bits (261), Expect = 5.960e-25
Identity = 51/122 (41.80%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   44 LKNEFQGIRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTEVVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTKVVLRGIRHKVSDKVK 165
            L+ EF G+R G+A PA+L+ ++V+ YG+   LS+VA +S+ GP L+ + ++D  +T+ V  A+RD ++GLNP  +GQ  + VP+P  ++E R+ L K AAK+AE  KV +RG+R    + +K
Sbjct:   25 LRKEFSGLRTGRASPALLEPIRVEAYGSNQPLSQVANISVAGPGLLSVQVWDKSVTKAVEVAIRDANLGLNPQAEGQ-VIRVPLPPLTQERRNDLAKQAAKYAEAAKVAIRGVRRDGMETIK 145          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig994.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1Z6_9PHAE7.490e-6065.28RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CM55_9STRA6.330e-3952.60Ribosome recycling factor domain-containing protei... [more]
A0A6V1LRG3_HETAK1.120e-2846.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001BA79AAC8.250e-2846.49ribosome recycling factor n=1 Tax=Roseomonas terra... [more]
A0A7S1U0D6_9STRA1.860e-2643.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A840XNP9_9PROT5.120e-2641.80Ribosome-recycling factor n=12 Tax=Roseomonas TaxI... [more]
A0A437MJH9_9PROT1.070e-2541.96Ribosome-recycling factor n=2 Tax=Rhodovarius TaxI... [more]
A0A3B9K4C6_9PROT2.640e-2539.86Ribosome-recycling factor n=2 Tax=unclassified Alp... [more]
UPI001C2C08B05.670e-2538.89ribosome recycling factor n=1 Tax=Siccirubricoccus... [more]
UPI001E4BBADF5.960e-2541.80ribosome recycling factor n=1 Tax=Roseomonas sp. O... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 44..183
e-value: 1.7E-39
score: 135.3
IPR036191RRF superfamilyGENE3D1.10.132.20coord: 42..183
e-value: 9.4E-41
score: 141.1
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 39..184
NoneNo IPR availableGENE3D3.30.1360.40coord: 55..130
e-value: 9.4E-41
score: 141.1
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 41..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig994contigD-mesarthrocarpus_Contig994:23214..24958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig994.2.1mRNA_D-mesarthrocarpus_Contig994.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig994 23020..24958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig994.2.1 ID=prot_D-mesarthrocarpus_Contig994.2.1|Name=mRNA_D-mesarthrocarpus_Contig994.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=192bp
MNMAAVVAYGSYFISAVPAFFPALALARIYLLAHNRPRLVYQGLKNEFQG
IRGGKADPAMLDHVQVDMYGTMSNLSEVAQVSMKGPQLMMLTMYDPGMTE
VVAAAVRDCDMGLNPSVDGQNQVSVPIPKTSKESRDALVKIAAKHAEKTK
VVLRGIRHKVSDKVKKKKDLFSLDDVHVRLKEVRQGPFCVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023584Ribosome_recyc_fac_dom
IPR036191RRF_sf
IPR002661Ribosome_recyc_fac